miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>26048_gga-mir-1329:mirbase
          Length = 95

 Score =  165 bits (83), Expect = 6e-42
 Identities = 86/87 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  tctggttgtagagatacagtgatcaggttacgatggatttctcaagtaacaacctcgtag 60
          ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 7  tctggttgtagagatacagtgatcacgttacgatggatttctcaagtaacaacctcgtag 66

                                     
Query: 61 cttgatcacgatatccctatgacttga 87
          |||||||||||||||||||||||||||
Sbjct: 67 cttgatcacgatatccctatgacttga 93




>31571_oan-mir-1329:mirbase
          Length = 126

 Score =  127 bits (64), Expect = 1e-30
 Identities = 79/84 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  tctggttgtagagatacagtgatcaggttacgatggatttctcaagtaacaacctcgtag 60
          ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tctggttgtaggggtacagtgatcaggttacgatggatttctcaagtaacaacctcgtag 72

                                  
Query: 61 cttgatcacgatatccctatgact 84
          || | ||||||||||| |||||||
Sbjct: 73 ctcggtcacgatatccatatgact 96