miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31630_oan-mir-1388:mirbase
Length = 95
Score = 77.8 bits (39), Expect = 1e-15
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 22 aggactgtctaacctgagaatggtgaaacatcaaggtcaatctcaggttcgtcagcccat 81
|||||||||||||||||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 19 aggactgtctaacctgagaatggtgatgtgtgagggtcaatctcaggttcgtcagcccat 78
Query: 82 gagatgccttc 92
|| | ||||||
Sbjct: 79 gaaacgccttc 89
>34507_dre-mir-1388:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 56 ggtcaatctcaggttcgtcagcccatga 83
||||||||||||||||||||||||||||
Sbjct: 55 ggtcaatctcaggttcgtcagcccatga 82
>33490_bta-mir-1388:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 52/59 (88%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 22 aggactgtctaacctgagaatggtgaaacatcaaggt-caatctcaggttcgtcagccc 79
||||||||| |||||||||||||||| |||| ||| |||||||||||| ||||||||
Sbjct: 17 aggactgtccaacctgagaatggtgag-catccagggacaatctcaggtttgtcagccc 74
>33491_bta-mir-1388:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 52/59 (88%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 22 aggactgtctaacctgagaatggtgaaacatcaaggt-caatctcaggttcgtcagccc 79
||||||||| |||||||||||||||| |||| ||| |||||||||||| ||||||||
Sbjct: 17 aggactgtccaacctgagaatggtgag-catccagggacaatctcaggtttgtcagccc 74
