miRNEST 2.0, an integrative microRNA resource :: BLAST
>39859_aly-MIR319b:mirbase
Length = 246
Score = 276 bits (139), Expect = 6e-75
Identities = 172/183 (93%)
Strand = Plus / Plus
Query: 8 gttggtgggggaagggagctttcttcggtccactcatagaataatatgtgagatttaatt 67
||||||| ||||| |||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 28 gttggtgaaggaagagagctttcttcggtccactcatggagtaatatgtgagatttaatt 87
Query: 68 gactctcgactcattcatccaaataccaaatgaaagaatatgtagacatatggtaaatga 127
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 88 gactctcgactcattcatccaaataccaaatgaaagaacatgttctcatatggtaaatga 147
Query: 128 atgaatgatgctagagacaaattgaatcttcacttctctatgcttggactgaagggagct 187
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 148 atgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaagggagct 207
Query: 188 ccc 190
|||
Sbjct: 208 ccc 210
>40070_ath-MIR319b:mirbase
Length = 172
Score = 270 bits (136), Expect = 4e-73
Identities = 160/168 (95%)
Strand = Plus / Plus
Query: 23 gagctttcttcggtccactcatagaataatatgtgagatttaattgactctcgactcatt 82
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 4 gagctttcttcggtccactcatggagtaatatgtgagatttaattgactctcgactcatt 63
Query: 83 catccaaataccaaatgaaagaatatgtagacatatggtaaatgaatgaatgatgctaga 142
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||
Sbjct: 64 catccaaataccaaatgaaagaatttgttctcatatggtaaatgaatgaatgatgcgaga 123
Query: 143 gacaaattgaatcttcacttctctatgcttggactgaagggagctccc 190
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 124 gacaaattgagtcttcacttctctatgcttggactgaagggagctccc 171
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 73.8 bits (37), Expect = 5e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 122 aaatgaatgaatgatgctagagacaaattgaatcttcacttctctatgcttggactgaag 181
|||||| |||||||||| ||||||||||||||||| | || |||| ||||||||||||
Sbjct: 107 aaatgagtgaatgatgcgggagacaaattgaatcttaagtttcctatacttggactgaag 166
Query: 182 ggagctccc 190
|||||||||
Sbjct: 167 ggagctccc 175
>41282_ctr-MIR319:mirbase
Length = 186
Score = 71.9 bits (36), Expect = 2e-13
Identities = 65/72 (90%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 120 gtaaatgaatgaatgatgctagagacaaattgaatcttca-cttctctatgcttggactg 178
|||||||| |||||||||| ||||||||||||||||| | |||| || |||||||||||
Sbjct: 106 gtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttc-ctgtgcttggactg 164
Query: 179 aagggagctccc 190
||||||||||||
Sbjct: 165 aagggagctccc 176
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 gggagctttcttcggtccact 41
|||||||||||||||||||||
Sbjct: 8 gggagctttcttcggtccact 28
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 69.9 bits (35), Expect = 7e-13
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 120 gtaaatgaatgaatgatgctagagacaaattgaatcttcacttctctatgcttggactga 179
|||||||| |||||||||| ||||||||||| ||||| | || || ||||||||||||
Sbjct: 100 gtaaatgattgaatgatgcgggagacaaattggatcttaagctccctgtgcttggactga 159
Query: 180 agggagctccc 190
|||||||||||
Sbjct: 160 agggagctccc 170
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 74 cgactcattcatccaaatac 93
||||||||||||||||||||
Sbjct: 62 cgactcattcatccaaatac 81
>40367_rco-MIR319a:mirbase
Length = 211
Score = 63.9 bits (32), Expect = 5e-11
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 120 gtaaatgaatgaatgatgctagagacaaattgaatcttca-cttctctatgcttggactg 178
|||||||| |||||||||| ||||||||||||||||| | |||| || | |||||||||
Sbjct: 135 gtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttc-ctgtacttggactg 193
Query: 179 aagggagctccc 190
||||||||||||
Sbjct: 194 aagggagctccc 205
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 74 cgactcattcatccaaatac 93
||||||||||||||||||||
Sbjct: 56 cgactcattcatccaaatac 75
>40464_gma-MIR319a:mirbase
Length = 207
Score = 61.9 bits (31), Expect = 2e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 124 atgaatgaatgatgctagagacaaattgaatcttcacttctctatgcttggactgaaggg 183
|||| |||||||||| ||||||||||||||||| | || || | ||||||||||||||
Sbjct: 122 atgagtgaatgatgcgggagacaaattgaatcttaagtttcctgtacttggactgaaggg 181
Query: 184 agctccc 190
|||||||
Sbjct: 182 agctccc 188
>40069_ath-MIR319a:mirbase
Length = 176
Score = 60.0 bits (30), Expect = 7e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 121 taaatgaatgaatgatgctagagacaaattgaatcttcacttctctatgcttggactgaa 180
|||||||||||||||||| |||||||||| ||| | |||||| || ||||||||||
Sbjct: 104 taaatgaatgaatgatgcggtagacaaattggatcattgattctctttgattggactgaa 163
Query: 181 gggagctccc 190
||||||||||
Sbjct: 164 gggagctccc 173
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 cgactcattcatccaaatacc 94
|||||||||||||||||||||
Sbjct: 55 cgactcattcatccaaatacc 75
>39858_aly-MIR319a:mirbase
Length = 221
Score = 60.0 bits (30), Expect = 7e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 121 taaatgaatgaatgatgctagagacaaattgaatcttcacttctctatgcttggactgaa 180
|||||||||||||||||| |||||||||| ||| | |||||| || ||||||||||
Sbjct: 127 taaatgaatgaatgatgcggtagacaaattggatcattgattctctttgattggactgaa 186
Query: 181 gggagctccc 190
||||||||||
Sbjct: 187 gggagctccc 196
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 cgactcattcatccaaatacc 94
|||||||||||||||||||||
Sbjct: 78 cgactcattcatccaaatacc 98
>40465_gma-MIR319b:mirbase
Length = 208
Score = 58.0 bits (29), Expect = 3e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 122 aaatgaatgaatgatgctagagacaaattgaatcttcacttctctatgcttggactgaag 181
|||||| |||||||||| |||||||||||| |||| | || || | ||||||||||||
Sbjct: 121 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 180
Query: 182 ggagctccc 190
|||||||||
Sbjct: 181 ggagctccc 189
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 56.0 bits (28), Expect = 1e-08
Identities = 63/72 (87%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 120 gtaaatgaatgaatgatgctagagacaaattgaatctt-cacttctctatgcttggactg 178
|||||||||||| |||||| |||||||||| |||||| ||||| |||| ||||||||
Sbjct: 106 gtaaatgaatgagtgatgcgggagacaaattaaatcttaaacttc-ctatcattggactg 164
Query: 179 aagggagctccc 190
||||||||||||
Sbjct: 165 aagggagctccc 176
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 74 cgactcattcatccaaatac 93
||||||||||||||||||||
Sbjct: 62 cgactcattcatccaaatac 81
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 56.0 bits (28), Expect = 1e-08
Identities = 63/72 (87%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 120 gtaaatgaatgaatgatgctagagacaaattgaatcttca-cttctctatgcttggactg 178
|||||||| |||||||||| ||||||||||||||| | | |||| || | |||||||||
Sbjct: 109 gtaaatgagtgaatgatgcgggagacaaattgaatcctaagcttc-ctgtacttggactg 167
Query: 179 aagggagctccc 190
||||||||||||
Sbjct: 168 aagggagctccc 179
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 74 cgactcattcatccaaatac 93
||||||||||||||||||||
Sbjct: 62 cgactcattcatccaaatac 81
>40369_rco-MIR319c:mirbase
Length = 188
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 155 cttcacttctctatgcttggactgaagggagctccc 190
|||| ||||||| |||||||||||||||||||||||
Sbjct: 147 cttctcttctctgtgcttggactgaagggagctccc 182
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 160 cttctctatgcttggactgaagggagctccc 190
||||||| |||||||||||||||||||||||
Sbjct: 154 cttctctgtgcttggactgaagggagctccc 184
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 160 cttctctatgcttggactgaagggagctccc 190
||||||| |||||||||||||||||||||||
Sbjct: 157 cttctctgtgcttggactgaagggagctccc 187
>42642_tae-MIR319:mirbase
Length = 211
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 167 atgcttggactgaagggagctccc 190
||||||||||||||||||||||||
Sbjct: 180 atgcttggactgaagggagctccc 203
>41770_bdi-MIR319:mirbase
Length = 280
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 167 atgcttggactgaagggagctccc 190
||||||||||||||||||||||||
Sbjct: 222 atgcttggactgaagggagctccc 245
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 168 tgcttggactgaagggagctccc 190
|||||||||||||||||||||||
Sbjct: 159 tgcttggactgaagggagctccc 181
>40703_mtr-MIR319:mirbase
Length = 207
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 168 tgcttggactgaagggagctccc 190
|||||||||||||||||||||||
Sbjct: 166 tgcttggactgaagggagctccc 188
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 168 tgcttggactgaagggagctcc 189
||||||||||||||||||||||
Sbjct: 173 tgcttggactgaagggagctcc 194
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 168 tgcttggactgaagggagctcc 189
||||||||||||||||||||||
Sbjct: 171 tgcttggactgaagggagctcc 192
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccc 190
|||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccc 182
>41185_aqc-MIR319:mirbase
Length = 177
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccc 190
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 169 gcttggactgaagggagctcc 189
|||||||||||||||||||||
Sbjct: 408 gcttggactgaagggagctcc 428
>40466_gma-MIR319c:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 161 ttctctatgcttggactgaagggagctcc 189
|||||| ||||||||||||| ||||||||
Sbjct: 173 ttctctgtgcttggactgaaaggagctcc 201
>40368_rco-MIR319b:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccc 190
|||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctccc 173
>39740_smo-MIR319:mirbase
Length = 215
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccc 190
|||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccc 205
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccc 190
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccc 190
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccc 190
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 171 ttggactgaagggagctccc 190
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>41544_sly-MIR319:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctcc 189
||||||||||||||||||||
Sbjct: 149 cttggactgaagggagctcc 168
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctcc 189
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctcc 189
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
