miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26947_eca-mir-16:mirbase
Length = 81
Score = 121 bits (61), Expect = 6e-29
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgtagtgaaataaaaattaaacaccaatattattgtgctg 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattggcgtagtgaaataaatattaaacaccaatattattgtgctg 69
Query: 61 cttta 65
|||||
Sbjct: 70 cttta 74
>31778_mmu-mir-16-2:mirbase
Length = 95
Score = 121 bits (61), Expect = 6e-29
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgtagtgaaataaaaattaaacaccaatattattgtgctg 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 17 tagcagcacgtaaatattggcgtagtgaaataaatattaaacaccaatattattgtgctg 76
Query: 61 cttta 65
|||||
Sbjct: 77 cttta 81
>32659_rno-mir-16:mirbase
Length = 95
Score = 121 bits (61), Expect = 6e-29
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgtagtgaaataaaaattaaacaccaatattattgtgctg 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 17 tagcagcacgtaaatattggcgtagtgaaataaatattaaacaccaatattattgtgctg 76
Query: 61 cttta 65
|||||
Sbjct: 77 cttta 81
>33131_bta-mir-16b:mirbase
Length = 93
Score = 113 bits (57), Expect = 1e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgtagtgaaataaaaattaaacaccaatattattgtgctg 60
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 17 tagcagcacgtaaatattggcgtagtaaaataaatattaaacaccaatattattgtgctg 76
Query: 61 cttta 65
|||||
Sbjct: 77 cttta 81
>33913_ssc-mir-16-1:mirbase
Length = 77
Score = 113 bits (57), Expect = 1e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgtagtgaaataaaaattaaacaccaatattattgtgctg 60
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 8 tagcagcacgtaaatattggcgtagtaaaataaatattaaacaccaatattattgtgctg 67
Query: 61 cttta 65
|||||
Sbjct: 68 cttta 72
>28363_hsa-mir-16-2:mirbase
Length = 81
Score = 105 bits (53), Expect = 4e-24
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgtagtgaaataaaaattaaacaccaatattattgtgctg 60
|||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||
Sbjct: 10 tagcagcacgtaaatattggcgtagtgaaatatatattaaacaccaatattactgtgctg 69
Query: 61 cttta 65
|||||
Sbjct: 70 cttta 74
>30149_ptr-mir-16-2:mirbase
Length = 80
Score = 97.6 bits (49), Expect = 9e-22
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgtagtgaaataaaaattaaacaccaatattattgtgctg 60
|||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||
Sbjct: 9 tagcagcacgtaaatattggcgtagtgaaatatatgttaaacaccaatattactgtgctg 68
Query: 61 cttta 65
|||||
Sbjct: 69 cttta 73
>27653_mml-mir-16-2:mirbase
Length = 81
Score = 93.7 bits (47), Expect = 1e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgtagtgaaataaaaattaaacaccaatattattgtgctg 60
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 10 tagcagcacgtaaatattggcgtagtgaaatatgtattaaacaccaatattactgtgctg 69
Query: 61 ctt 63
|||
Sbjct: 70 ctt 72
>30754_ppy-mir-16-2:mirbase
Length = 82
Score = 91.7 bits (46), Expect = 5e-20
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg-cgtagtgaaataaaaattaaacaccaatattattgtgct 59
|||||||||||||||||||| |||||||||||| | ||||||||||||||||| ||||||
Sbjct: 10 tagcagcacgtaaatattgggcgtagtgaaatatatattaaacaccaatattactgtgct 69
Query: 60 gcttta 65
||||||
Sbjct: 70 gcttta 75
>25895_gga-mir-16-2:mirbase
Length = 94
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgtagtgaaataaaaattaaacaccaatattattgtgctg 60
|||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||||
Sbjct: 17 tagcagcacgtaaatattggtgtagtaaaataaaccttaaaccccaatattattgtgctg 76
Query: 61 ctt 63
|||
Sbjct: 77 ctt 79
>31429_oan-mir-16b:mirbase
Length = 101
Score = 63.9 bits (32), Expect = 1e-11
Identities = 57/65 (87%), Gaps = 4/65 (6%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgtagtgaaataaaaattaaacaccaatattattgtgctg 60
|||||||||||||||||||| |||||||| | |||||| |||||||||||||||||
Sbjct: 21 tagcagcacgtaaatattggtgtagtgaagt----cttaaaccccaatattattgtgctg 76
Query: 61 cttta 65
|||||
Sbjct: 77 cttta 81
>26400_tgu-mir-16b:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 1e-08
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgtagtgaaataaaaattaaacaccaatattattgtgctg 60
|||||||||||||||||||| || || ||| ||| || ||| |||||||||||||||||
Sbjct: 11 tagcagcacgtaaatattggagt-gtcaaagaaaccttcaaccccaatattattgtgctg 69
Query: 61 ctt 63
|||
Sbjct: 70 ctt 72
>26625_cfa-mir-16-1:mirbase
Length = 65
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattggcgt 23
>26948_eca-mir-16-2:mirbase
Length = 63
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattggcgt 23
>27334_mdo-mir-16:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>27480_age-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>27589_sla-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>27652_mml-mir-16-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>28172_mne-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>28260_ggo-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>28362_hsa-mir-16-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>30044_ppa-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>30148_ptr-mir-16-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>30753_ppy-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>31428_oan-mir-16a:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 29 tagcagcacgtaaatattggcgt 51
>31777_mmu-mir-16-1:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 16 tagcagcacgtaaatattggcgt 38
>33914_ssc-mir-16-2:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcgt 23
|||||||||||||||||||||||
Sbjct: 9 tagcagcacgtaaatattggcgt 31
>27541_lla-mir-16:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggcg 22
||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcg 35
>25429_pma-mir-16:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattgg 29
>25700_xtr-mir-16a:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattgg 33
>25701_xtr-mir-16b:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattgg 33
>25894_gga-mir-16-1:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattgg 33
>26399_tgu-mir-16a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 11 tagcagcacgtaaatattgg 30
>31394_lca-mir-16:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattgg 33
>33130_bta-mir-16a:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattgg 33
>34206_dre-mir-16a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 13 tagcagcacgtaaatattgg 32
>34207_dre-mir-16b:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 39 tagcagcacgtaaatattgg 58
>34547_fru-mir-16:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 13 tagcagcacgtaaatattgg 32
>34695_tni-mir-16:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattgg 20
