miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27485_age-mir-19b-1:mirbase
Length = 87
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 75
>27546_lla-mir-19b-1:mirbase
Length = 87
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 75
>27594_sla-mir-19b-1:mirbase
Length = 87
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 75
>27659_mml-mir-19b-1:mirbase
Length = 87
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 75
>28177_mne-mir-19b-1:mirbase
Length = 87
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 75
>28265_ggo-mir-19b-1:mirbase
Length = 87
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 75
>28368_hsa-mir-19b-1:mirbase
Length = 87
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 75
>30049_ppa-mir-19b-1:mirbase
Length = 87
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 75
>30155_ptr-mir-19b-1:mirbase
Length = 87
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 75
>30760_ppy-mir-19b-1:mirbase
Length = 87
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 75
>33137_bta-mir-19b:mirbase
Length = 87
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 75
>33920_ssc-mir-19b-1:mirbase
Length = 80
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 73
>26953_eca-mir-19b:mirbase
Length = 64
Score = 109 bits (55), Expect = 2e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5 gttttgcaggtttgcatccagctgtgtgatgttctgctgtgcaaatccatgcaaaactg 63
>27339_mdo-mir-19b:mirbase
Length = 89
Score = 109 bits (55), Expect = 2e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 18 gttttgcaggtttgcatccagctgtatgatattctgctgtgcaaatccatgcaaaactg 76
>31399_lca-mir-19b-1:mirbase
Length = 87
Score = 109 bits (55), Expect = 2e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtgtaatattctgctgtgcaaatccatgcaaaactg 75
>25902_gga-mir-19b:mirbase
Length = 87
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtatgatactctgctgtgcaaatccatgcaaaactg 75
>26407_tgu-mir-19b-1:mirbase
Length = 73
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 4 gttttgcaggtttgcatccagctgtatgatactctgctgtgcaaatccatgcaaaactg 62
>31783_mmu-mir-19b-1:mirbase
Length = 87
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtataatattctgctgtgcaaatccatgcaaaactg 75
>32666_rno-mir-19b-1:mirbase
Length = 87
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccagctgtgtgatattctgctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 17 gttttgcaggtttgcatccagctgtataatattctgctgtgcaaatccatgcaaaactg 75
>25708_xtr-mir-19b-1:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 4e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 30 tattctgctgtgcaaatccatgcaaaactg 59
|||| |||||||||||||||||||||||||
Sbjct: 36 tattgtgctgtgcaaatccatgcaaaactg 65
>25436_pma-mir-19b:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 35 tgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||
Sbjct: 50 tgctgtgcaaatccatgcaaaactg 74
>25657_xla-mir-19b:mirbase
Length = 73
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 35 tgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||
Sbjct: 41 tgctgtgcaaatccatgcaaaactg 65
>26408_tgu-mir-19b-2:mirbase
Length = 73
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 35 tgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||
Sbjct: 38 tgctgtgcaaatccatgcaaaactg 62
>31434_oan-mir-19b:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 35 tgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||
Sbjct: 56 tgctgtgcaaatccatgcaaaactg 80
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatcc 19
|||||||||||||||||||
Sbjct: 23 gttttgcaggtttgcatcc 41
>34700_tni-mir-19b:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 35 tgctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||||
Sbjct: 50 tgctgtgcaaatccatgcaaaactg 74
>26632_cfa-mir-19b-2:mirbase
Length = 64
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 41 gctgtgcaaatccatgcaaaactg 64
>26954_eca-mir-19b-2:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 60 gctgtgcaaatccatgcaaaactg 83
>27486_age-mir-19b-2:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 60 gctgtgcaaatccatgcaaaactg 83
>27547_lla-mir-19b-2:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 60 gctgtgcaaatccatgcaaaactg 83
>27595_sla-mir-19b-2:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 60 gctgtgcaaatccatgcaaaactg 83
>27660_mml-mir-19b-2:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 60 gctgtgcaaatccatgcaaaactg 83
>28178_mne-mir-19b-2:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 60 gctgtgcaaatccatgcaaaactg 83
>28266_ggo-mir-19b-2:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 60 gctgtgcaaatccatgcaaaactg 83
>28369_hsa-mir-19b-2:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 60 gctgtgcaaatccatgcaaaactg 83
>30050_ppa-mir-19b-2:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 60 gctgtgcaaatccatgcaaaactg 83
>30156_ptr-mir-19b-2:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 61 gctgtgcaaatccatgcaaaactg 84
>30761_ppy-mir-19b-2:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 60 gctgtgcaaatccatgcaaaactg 83
>31400_lca-mir-19b-2:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 54 gctgtgcaaatccatgcaaaactg 77
>31784_mmu-mir-19b-2:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 52 gctgtgcaaatccatgcaaaactg 75
>32667_rno-mir-19b-2:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 60 gctgtgcaaatccatgcaaaactg 83
>33138_bta-mir-19b-2:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 54 gctgtgcaaatccatgcaaaactg 77
>33921_ssc-mir-19b-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 49 gctgtgcaaatccatgcaaaactg 72
>34215_dre-mir-19b:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 53 gctgtgcaaatccatgcaaaactg 76
>34216_dre-mir-19c:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 35 tgctgtgcaaatccatgcaaaact 58
||||||||||||||||||||||||
Sbjct: 61 tgctgtgcaaatccatgcaaaact 84
>34552_fru-mir-19b:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
||||||||||||||||||||||||
Sbjct: 38 gctgtgcaaatccatgcaaaactg 61
>25709_xtr-mir-19b-2:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 ctgtgcaaatccatgcaaaactg 59
|||||||||||||||||||||||
Sbjct: 48 ctgtgcaaatccatgcaaaactg 70
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gttttgcaggtttgcatccag 21
|||||||||||||||||||||
Sbjct: 11 gttttgcaggtttgcatccag 31
>34217_dre-mir-19d:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 36 gctgtgcaaatccatgcaaaactg 59
|||||||||| |||||||||||||
Sbjct: 51 gctgtgcaaacccatgcaaaactg 74
