miRNEST 2.0, an integrative microRNA resource :: BLAST
>26956_eca-mir-20b:mirbase
Length = 69
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1 gtaccaaagtgctcacagtgcaggtagtctgggcttttctctactgtagtgtgggcactt 60
||||||||||||||| |||||||||||| | ||| || ||||||||||||||||||||||
Sbjct: 2 gtaccaaagtgctcatagtgcaggtagttttggcattactctactgtagtgtgggcactt 61
Query: 61 cc 62
||
Sbjct: 62 cc 63
>27662_mml-mir-20b:mirbase
Length = 69
Score = 75.8 bits (38), Expect = 3e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 gtaccaaagtgctcacagtgcaggtagtctgggcttttctctactgtagtgtgggcactt 60
||||||||||||||| |||||||||||| | ||| | ||||||||||||||||||||||
Sbjct: 2 gtaccaaagtgctcatagtgcaggtagttttggcatgactctactgtagtgtgggcactt 61
Query: 61 cc 62
||
Sbjct: 62 cc 63
>33140_bta-mir-20b:mirbase
Length = 69
Score = 75.8 bits (38), Expect = 3e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 gtaccaaagtgctcacagtgcaggtagtctgggcttttctctactgtagtgtgggcactt 60
|||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||
Sbjct: 2 gtaccaaagtgctcacagtgcaggtagttttggcagcgctctactgtagtgtgggcactt 61
Query: 61 cc 62
||
Sbjct: 62 cc 63
>28371_hsa-mir-20b:mirbase
Length = 69
Score = 67.9 bits (34), Expect = 8e-13
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 gtaccaaagtgctcacagtgcaggtagtctgggcttttctctactgtagtgtgggcactt 60
||||||||||||||| |||||||||||| | ||| | |||||||||||| |||||||||
Sbjct: 2 gtaccaaagtgctcatagtgcaggtagttttggcatgactctactgtagtatgggcactt 61
Query: 61 cc 62
||
Sbjct: 62 cc 63
>30158_ptr-mir-20b:mirbase
Length = 68
Score = 67.9 bits (34), Expect = 8e-13
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 gtaccaaagtgctcacagtgcaggtagtctgggcttttctctactgtagtgtgggcactt 60
||||||||||||||| |||||||||||| | ||| | |||||||||||| |||||||||
Sbjct: 2 gtaccaaagtgctcatagtgcaggtagttttggcatgactctactgtagtatgggcactt 61
Query: 61 cc 62
||
Sbjct: 62 cc 63
>30763_ppy-mir-20b:mirbase
Length = 69
Score = 67.9 bits (34), Expect = 8e-13
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 gtaccaaagtgctcacagtgcaggtagtctgggcttttctctactgtagtgtgggcactt 60
||||||||||||||| |||||||||||| | ||| | |||||||||||| |||||||||
Sbjct: 2 gtaccaaagtgctcatagtgcaggtagttttggcatgactctactgtagtatgggcactt 61
Query: 61 cc 62
||
Sbjct: 62 cc 63
>34219_dre-mir-20b:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 4 ccaaagtgctcacagtgcaggtagt 28
|||||||||||||||||||||||||
Sbjct: 19 ccaaagtgctcacagtgcaggtagt 43
>31437_oan-mir-20b:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 gtaccaaagtgctcacagtgcaggtagt 28
||||||||||||||| ||||||||||||
Sbjct: 20 gtaccaaagtgctcatagtgcaggtagt 47
>25658_xla-mir-20:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 4 ccaaagtgctcacagtgcaggtagt 28
|||||||||||| ||||||||||||
Sbjct: 7 ccaaagtgctcatagtgcaggtagt 31
>25711_xtr-mir-20b:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 4 ccaaagtgctcacagtgcaggtagt 28
|||||||||||| ||||||||||||
Sbjct: 7 ccaaagtgctcatagtgcaggtagt 31
>31786_mmu-mir-20b:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 4 ccaaagtgctcacagtgcaggtagt 28
|||||||||||| ||||||||||||
Sbjct: 11 ccaaagtgctcatagtgcaggtagt 35
>34548_fru-mir-17-1:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 4 ccaaagtgctcacagtgcaggtagt 28
|||||||||| ||||||||||||||
Sbjct: 13 ccaaagtgcttacagtgcaggtagt 37
>34696_tni-mir-17-1:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 4 ccaaagtgctcacagtgcaggtagt 28
|||||||||| ||||||||||||||
Sbjct: 13 ccaaagtgcttacagtgcaggtagt 37
>25703_xtr-mir-17:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 15 caaagtgcttacagtgcaggtagt 38
>25704_xtr-mir-17:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 15 caaagtgcttacagtgcaggtagt 38
>25897_gga-mir-17:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>25898_gga-mir-17:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>26402_tgu-mir-17a:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 3 caaagtgcttacagtgcaggtagt 26
>26403_tgu-mir-17a:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 3 caaagtgcttacagtgcaggtagt 26
>26627_cfa-mir-17:mirbase
Length = 59
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 1 caaagtgcttacagtgcaggtagt 24
>26949_eca-mir-17:mirbase
Length = 59
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 1 caaagtgcttacagtgcaggtagt 24
>27335_mdo-mir-17:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>27336_mdo-mir-17:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>27481_age-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>27482_age-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>27542_lla-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>27543_lla-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>27590_sla-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>27591_sla-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>27654_mml-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>27655_mml-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>28173_mne-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>28174_mne-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>28261_ggo-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>28262_ggo-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>28364_hsa-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>30045_ppa-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>30046_ppa-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>30150_ptr-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>30151_ptr-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>30755_ppy-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>30756_ppy-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>31395_lca-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>31396_lca-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>31431_oan-mir-17:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>31779_mmu-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>32660_rno-mir-17-1:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>32661_rno-mir-17-1:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>32669_rno-mir-20b:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 4 ccaaagtgctcacagtgcaggtag 27
|||||||||||| |||||||||||
Sbjct: 7 ccaaagtgctcatagtgcaggtag 30
>32670_rno-mir-20b:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 4 ccaaagtgctcacagtgcaggtag 27
|||||||||||| |||||||||||
Sbjct: 7 ccaaagtgctcatagtgcaggtag 30
>33132_bta-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>33133_bta-mir-17:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>33915_ssc-mir-17:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 10 caaagtgcttacagtgcaggtagt 33
>33916_ssc-mir-17:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 10 caaagtgcttacagtgcaggtagt 33
>34209_dre-mir-17a-1:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 41 caaagtgcttacagtgcaggtagt 64
>34210_dre-mir-17a-2:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>34549_fru-mir-17-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>34697_tni-mir-17-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtagt 28
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>25904_gga-mir-20b:mirbase
Length = 85
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtag 27
||||||||||| |||||||||||
Sbjct: 11 caaagtgctcatagtgcaggtag 33
>26410_tgu-mir-20b:mirbase
Length = 73
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtag 27
||||||||||| |||||||||||
Sbjct: 11 caaagtgctcatagtgcaggtag 33
>27002_eca-mir-106a:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtag 27
||||||||| |||||||||||||
Sbjct: 13 caaagtgcttacagtgcaggtag 35
>31834_mmu-mir-106a:mirbase
Length = 65
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtag 27
||||||||| |||||||||||||
Sbjct: 5 caaagtgctaacagtgcaggtag 27
>32662_rno-mir-17-2:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtag 27
||||||||| |||||||||||||
Sbjct: 11 caaagtgcttacagtgcaggtag 33
>32663_rno-mir-17-2:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 5 caaagtgctcacagtgcaggtag 27
||||||||| |||||||||||||
Sbjct: 11 caaagtgcttacagtgcaggtag 33
