miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33144_bta-mir-23a:mirbase
Length = 73
Score = 103 bits (52), Expect = 1e-23
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 63
>33926_ssc-mir-23a:mirbase
Length = 70
Score = 103 bits (52), Expect = 1e-23
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 60
>26959_eca-mir-23a:mirbase
Length = 73
Score = 95.6 bits (48), Expect = 3e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 12 gttcctggggatgggatttgctgcttgtcacaaatcacattgccagggattt 63
>27490_age-mir-23a:mirbase
Length = 73
Score = 95.6 bits (48), Expect = 3e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 12 gttcctggggatgggatttgctgcctatcacaaatcacattgccagggattt 63
>27598_sla-mir-23a:mirbase
Length = 73
Score = 95.6 bits (48), Expect = 3e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 12 gttcctggggatgggatttgctgcctatcacaaatcacattgccagggattt 63
>27665_mml-mir-23a:mirbase
Length = 73
Score = 95.6 bits (48), Expect = 3e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
|||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12 gttcctggggatgggatttgcttcctgtcacaaatcacattgccagggattt 63
>28182_mne-mir-23a:mirbase
Length = 73
Score = 95.6 bits (48), Expect = 3e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
|||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12 gttcctggggatgggatttgcttcctgtcacaaatcacattgccagggattt 63
>28269_ggo-mir-23a:mirbase
Length = 73
Score = 95.6 bits (48), Expect = 3e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
|||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12 gttcctggggatgggatttgcttcctgtcacaaatcacattgccagggattt 63
>28374_hsa-mir-23a:mirbase
Length = 73
Score = 95.6 bits (48), Expect = 3e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
|||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12 gttcctggggatgggatttgcttcctgtcacaaatcacattgccagggattt 63
>30054_ppa-mir-23a:mirbase
Length = 73
Score = 95.6 bits (48), Expect = 3e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
|||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12 gttcctggggatgggatttgcttcctgtcacaaatcacattgccagggattt 63
>30161_ptr-mir-23a:mirbase
Length = 73
Score = 95.6 bits (48), Expect = 3e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
|||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12 gttcctggggatgggatttgcttcctgtcacaaatcacattgccagggattt 63
>30766_ppy-mir-23a:mirbase
Length = 73
Score = 95.6 bits (48), Expect = 3e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
|||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12 gttcctggggatgggatttgcttcctgtcacaaatcacattgccagggattt 63
>31403_lca-mir-23a:mirbase
Length = 73
Score = 87.7 bits (44), Expect = 6e-19
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
|||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 12 gttcctggggatgggatttgctacctatcacaaatcacattgccagggattt 63
>31789_mmu-mir-23a:mirbase
Length = 75
Score = 87.7 bits (44), Expect = 6e-19
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
|||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 13 gttcctggggatgggatttgatgccagtcacaaatcacattgccagggattt 64
>32673_rno-mir-23a:mirbase
Length = 75
Score = 87.7 bits (44), Expect = 6e-19
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
|||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 13 gttcctggggatgggatttgatgccagtcacaaatcacattgccagggattt 64
>27343_mdo-mir-23a:mirbase
Length = 73
Score = 71.9 bits (36), Expect = 4e-14
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 1 gttcctggggatgggatttgctgcctgtcacaaatcacattgccagggattt 52
|||||||||||||||||||| | ||| ||||||||||||||||||||||||
Sbjct: 9 gttcctggggatgggatttgattactgccacaaatcacattgccagggattt 60
>25659_xla-mir-23a:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 3e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggattt 52
|||||||||||||||||||||
Sbjct: 49 aaatcacattgccagggattt 69
>25713_xtr-mir-23a-1:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 3e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggattt 52
|||||||||||||||||||||
Sbjct: 49 aaatcacattgccagggattt 69
>25714_xtr-mir-23a-2:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 3e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggattt 52
|||||||||||||||||||||
Sbjct: 50 aaatcacattgccagggattt 70
>31440_oan-mir-23a:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 3e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggattt 52
|||||||||||||||||||||
Sbjct: 51 aaatcacattgccagggattt 71
>34224_dre-mir-23a-1:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 3e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggattt 52
|||||||||||||||||||||
Sbjct: 54 aaatcacattgccagggattt 74
>34226_dre-mir-23a-3:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 3e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggattt 52
|||||||||||||||||||||
Sbjct: 46 aaatcacattgccagggattt 66
>34557_fru-mir-23a-1:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 3e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggattt 52
|||||||||||||||||||||
Sbjct: 54 aaatcacattgccagggattt 74
>34558_fru-mir-23a-2:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 3e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggattt 52
|||||||||||||||||||||
Sbjct: 46 aaatcacattgccagggattt 66
>34705_tni-mir-23a-1:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 3e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggattt 52
|||||||||||||||||||||
Sbjct: 54 aaatcacattgccagggattt 74
>34706_tni-mir-23a-2:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 3e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggattt 52
|||||||||||||||||||||
Sbjct: 46 aaatcacattgccagggattt 66
>25442_pma-mir-23a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 48 aaatcacattgccagggatt 67
>25443_pma-mir-23b:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 52 aaatcacattgccagggatt 71
>25715_xtr-mir-23b:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 51 aaatcacattgccagggatt 70
>25907_gga-mir-23b:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 50 aaatcacattgccagggatt 69
>26412_tgu-mir-23:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 39 aaatcacattgccagggatt 58
>26638_cfa-mir-23b:mirbase
Length = 54
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 34 aaatcacattgccagggatt 53
>26960_eca-mir-23b:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 44 aaatcacattgccagggatt 63
>27344_mdo-mir-23b:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 44 aaatcacattgccagggatt 63
>27666_mml-mir-23b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 56 aaatcacattgccagggatt 75
>28375_hsa-mir-23b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 56 aaatcacattgccagggatt 75
>30055_ppa-mir-23b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 56 aaatcacattgccagggatt 75
>30162_ptr-mir-23b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 56 aaatcacattgccagggatt 75
>30767_ppy-mir-23b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 56 aaatcacattgccagggatt 75
>31790_mmu-mir-23b:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 44 aaatcacattgccagggatt 63
>32674_rno-mir-23b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 56 aaatcacattgccagggatt 75
>33145_bta-mir-23b:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 36 aaatcacattgccagggatt 55
>33146_bta-mir-23b:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 36 aaatcacattgccagggatt 55
>33927_ssc-mir-23b:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 48 aaatcacattgccagggatt 67
>34225_dre-mir-23a-2:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 aatcacattgccagggattt 52
||||||||||||||||||||
Sbjct: 56 aatcacattgccagggattt 75
>34227_dre-mir-23b:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 49 aaatcacattgccagggatt 68
>34559_fru-mir-23a-3:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 aatcacattgccagggattt 52
||||||||||||||||||||
Sbjct: 52 aatcacattgccagggattt 71
>34560_fru-mir-23b:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>34707_tni-mir-23a-3:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 aatcacattgccagggattt 52
||||||||||||||||||||
Sbjct: 53 aatcacattgccagggattt 72
>34708_tni-mir-23b:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggatt 51
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>31441_oan-mir-23b:mirbase
Length = 109
Score = 38.2 bits (19), Expect = 5e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 32 aaatcacattgccagggat 50
|||||||||||||||||||
Sbjct: 61 aaatcacattgccagggat 79
