miRNEST 2.0, an integrative microRNA resource :: BLAST
>27673_mml-mir-27a:mirbase
Length = 78
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 11 gggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaagttccg 70
>28187_mne-mir-27a:mirbase
Length = 79
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 11 gggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaagttccg 70
>28273_ggo-mir-27a:mirbase
Length = 78
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 11 gggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaagttccg 70
>28383_hsa-mir-27a:mirbase
Length = 78
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 11 gggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaagttccg 70
>30060_ppa-mir-27a:mirbase
Length = 78
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 11 gggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaagttccg 70
>30169_ptr-mir-27a:mirbase
Length = 78
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 11 gggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaagttccg 70
>30774_ppy-mir-27a:mirbase
Length = 78
Score = 103 bits (52), Expect = 1e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 11 gggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtggctaagttccg 70
>26966_eca-mir-27a:mirbase
Length = 77
Score = 95.6 bits (48), Expect = 3e-21
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
|||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||
Sbjct: 11 gggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtggctaagttccg 70
>31404_lca-mir-27a:mirbase
Length = 78
Score = 95.6 bits (48), Expect = 3e-21
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
|||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||
Sbjct: 11 gggcttagctgcttgtgagcagggtccacaccaaatcatgttcacagtggctaagttccg 70
>33931_ssc-mir-27a:mirbase
Length = 82
Score = 95.6 bits (48), Expect = 3e-21
Identities = 58/60 (96%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 15 gggcttagctgcttgtgagcag-gtccacagcaagtcgtgttcacagtggctaagttccg 73
>27491_age-mir-27a:mirbase
Length = 78
Score = 87.7 bits (44), Expect = 8e-19
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
|||||||||||||||||||||| || ||| ||||||| ||||||||||||||||||||||
Sbjct: 11 gggcttagctgcttgtgagcagggttcactccaagtcatgttcacagtggctaagttccg 70
>27599_sla-mir-27a:mirbase
Length = 78
Score = 87.7 bits (44), Expect = 8e-19
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
|||||||||||||||||||||| || ||| ||||||| ||||||||||||||||||||||
Sbjct: 11 gggcttagctgcttgtgagcagggttcactccaagtcatgttcacagtggctaagttccg 70
>33154_bta-mir-27a:mirbase
Length = 78
Score = 87.7 bits (44), Expect = 8e-19
Identities = 57/60 (95%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
|||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||
Sbjct: 15 gggcttagctgcttgtgagcag-gtccacatcaaatcgtgttcacagtggctaagttccg 73
>33155_bta-mir-27a:mirbase
Length = 78
Score = 87.7 bits (44), Expect = 8e-19
Identities = 57/60 (95%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
|||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||
Sbjct: 15 gggcttagctgcttgtgagcag-gtccacatcaaatcgtgttcacagtggctaagttccg 73
>31797_mmu-mir-27a:mirbase
Length = 87
Score = 81.8 bits (41), Expect = 5e-17
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaa-gtcgtgttcacagtggctaagttcc 59
||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||
Sbjct: 15 gggcttagctgcttgtgagcaaggtccacagcaaagtcgtgttcacagtggctaagttcc 74
Query: 60 g 60
|
Sbjct: 75 g 75
>32680_rno-mir-27a:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 1e-14
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 1 gggcttagctgcttgtgagcagagtccacaccaa-gtcgtgttcacagtggctaagttcc 59
||||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||||||
Sbjct: 15 gggcttagctgcttgtgagcaaggtctacagcaaagtcgtgttcacagtggctaagttcc 74
Query: 60 g 60
|
Sbjct: 75 g 75
>31444_oan-mir-27a:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 cgtgttcacagtggctaagttccg 60
||||||||||||||||||||||||
Sbjct: 49 cgtgttcacagtggctaagttccg 72
>27351_mdo-mir-27a:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 38 gtgttcacagtggctaagttccg 60
|||||||||||||||||||||||
Sbjct: 53 gtgttcacagtggctaagttccg 75
>25723_xtr-mir-27a:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttccg 60
||||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttccg 70
>34237_dre-mir-27a:mirbase
Length = 131
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttccg 60
||||||||||||||||||||||
Sbjct: 77 tgttcacagtggctaagttccg 98
>25449_pma-mir-27a:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttcc 59
|||||||||||||||||||||
Sbjct: 48 tgttcacagtggctaagttcc 68
>25450_pma-mir-27b:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 38 gtgttcacagtggctaagttc 58
|||||||||||||||||||||
Sbjct: 46 gtgttcacagtggctaagttc 66
>25725_xtr-mir-27c-1:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttcc 59
|||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttcc 72
>25726_xtr-mir-27c-2:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttcc 59
|||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttcc 72
>25724_xtr-mir-27b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>25910_gga-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>26416_tgu-mir-27:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>26646_cfa-mir-27b:mirbase
Length = 63
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 41 tgttcacagtggctaagttc 60
>26967_eca-mir-27b:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>27352_mdo-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>27674_mml-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>28384_hsa-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>30170_ptr-mir-27b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttc 77
>30775_ppy-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>31445_oan-mir-27b:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 70 tgttcacagtggctaagttc 89
>31798_mmu-mir-27b:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>32681_rno-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>33156_bta-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>33932_ssc-mir-27b:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 50 tgttcacagtggctaagttc 69
>34238_dre-mir-27b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 55 tgttcacagtggctaagttc 74
>34240_dre-mir-27d:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 55 tgttcacagtggctaagttc 74
>34241_dre-mir-27e:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 63 tgttcacagtggctaagttc 82
>34566_fru-mir-27b:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>34568_fru-mir-27e:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttc 77
>34713_tni-mir-27b:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>34715_tni-mir-27e:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgttcacagtggctaagttc 58
||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttc 77
