miRNEST 2.0, an integrative microRNA resource :: BLAST
>26967_eca-mir-27b:mirbase
Length = 73
Score = 125 bits (63), Expect = 4e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 66
Query: 61 tgc 63
|||
Sbjct: 67 tgc 69
>33156_bta-mir-27b:mirbase
Length = 97
Score = 125 bits (63), Expect = 4e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 78
Query: 61 tgc 63
|||
Sbjct: 79 tgc 81
>33932_ssc-mir-27b:mirbase
Length = 80
Score = 125 bits (63), Expect = 4e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 69
Query: 61 tgc 63
|||
Sbjct: 70 tgc 72
>27674_mml-mir-27b:mirbase
Length = 97
Score = 117 bits (59), Expect = 9e-28
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 19 agagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagttc 78
Query: 61 tgc 63
|||
Sbjct: 79 tgc 81
>28384_hsa-mir-27b:mirbase
Length = 97
Score = 117 bits (59), Expect = 9e-28
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 19 agagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagttc 78
Query: 61 tgc 63
|||
Sbjct: 79 tgc 81
>30170_ptr-mir-27b:mirbase
Length = 96
Score = 117 bits (59), Expect = 9e-28
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 18 agagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagttc 77
Query: 61 tgc 63
|||
Sbjct: 78 tgc 80
>30775_ppy-mir-27b:mirbase
Length = 97
Score = 117 bits (59), Expect = 9e-28
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 19 agagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagttc 78
Query: 61 tgc 63
|||
Sbjct: 79 tgc 81
>31798_mmu-mir-27b:mirbase
Length = 73
Score = 117 bits (59), Expect = 9e-28
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 7 agagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagttc 66
Query: 61 tgc 63
|||
Sbjct: 67 tgc 69
>32681_rno-mir-27b:mirbase
Length = 97
Score = 117 bits (59), Expect = 9e-28
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 19 agagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagttc 78
Query: 61 tgc 63
|||
Sbjct: 79 tgc 81
>26416_tgu-mir-27:mirbase
Length = 91
Score = 101 bits (51), Expect = 5e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 19 agagcttagctgattggtgaacagtgattgttttcctctttgttcacagtggctaagttc 78
Query: 61 tgc 63
|||
Sbjct: 79 tgc 81
>34566_fru-mir-27b:mirbase
Length = 74
Score = 101 bits (51), Expect = 5e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 7 agagcttagctgattggtgaacagtgattgatttcctctttgttcacagtggctaagttc 66
Query: 61 tgc 63
|||
Sbjct: 67 tgc 69
>34713_tni-mir-27b:mirbase
Length = 74
Score = 101 bits (51), Expect = 5e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 7 agagcttagctgattggtgaacagtgattgatttcctctttgttcacagtggctaagttc 66
Query: 61 tgc 63
|||
Sbjct: 67 tgc 69
>25724_xtr-mir-27b:mirbase
Length = 96
Score = 93.7 bits (47), Expect = 1e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||| || || || |||||||||||||||||||||||
Sbjct: 19 agagcttagctgattggtgaacagtgattgattccctctttgttcacagtggctaagttc 78
Query: 61 tgc 63
|||
Sbjct: 79 tgc 81
>25910_gga-mir-27b:mirbase
Length = 97
Score = 93.7 bits (47), Expect = 1e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||| || || || |||||||||||||||||||||||
Sbjct: 19 agagcttagctgattggtgaacagtgattgtttccctctttgttcacagtggctaagttc 78
Query: 61 tgc 63
|||
Sbjct: 79 tgc 81
>27352_mdo-mir-27b:mirbase
Length = 97
Score = 93.7 bits (47), Expect = 1e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
|||||||||| |||||||||||||| |||| ||||| |||||||||||||||||||||||
Sbjct: 19 agagcttagccgattggtgaacagtcactgatttcctctttgttcacagtggctaagttc 78
Query: 61 tgc 63
|||
Sbjct: 79 tgc 81
>31445_oan-mir-27b:mirbase
Length = 117
Score = 77.8 bits (39), Expect = 8e-16
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||| || | | |||||||||||||||||||||||
Sbjct: 30 agagcttagctgattggtgaacagtgattgctggactctttgttcacagtggctaagttc 89
Query: 61 tgc 63
|||
Sbjct: 90 tgc 92
>34238_dre-mir-27b:mirbase
Length = 91
Score = 65.9 bits (33), Expect = 3e-12
Identities = 56/63 (88%), Gaps = 3/63 (4%)
Strand = Plus / Plus
Query: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
||||||||||||||||||||||||||| || | |||||||||||||||||||||||
Sbjct: 18 agagcttagctgattggtgaacagtgattg---aactctttgttcacagtggctaagttc 74
Query: 61 tgc 63
|||
Sbjct: 75 tgc 77
>25450_pma-mir-27b:mirbase
Length = 75
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttctgc 63
|||||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttctgc 69
>34240_dre-mir-27d:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 39 tttgttcacagtggctaagttct 61
|||||||||||||||||||||||
Sbjct: 53 tttgttcacagtggctaagttct 75
>25449_pma-mir-27a:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ttgttcacagtggctaagttc 60
|||||||||||||||||||||
Sbjct: 47 ttgttcacagtggctaagttc 67
>34568_fru-mir-27e:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ttgttcacagtggctaagttc 60
|||||||||||||||||||||
Sbjct: 57 ttgttcacagtggctaagttc 77
>34715_tni-mir-27e:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ttgttcacagtggctaagttc 60
|||||||||||||||||||||
Sbjct: 57 ttgttcacagtggctaagttc 77
>25723_xtr-mir-27a:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>25725_xtr-mir-27c-1:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>25726_xtr-mir-27c-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>26645_cfa-mir-27a:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 39 tgttcacagtggctaagttc 58
>26966_eca-mir-27a:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27351_mdo-mir-27a:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>27491_age-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27599_sla-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27673_mml-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28187_mne-mir-27a:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28273_ggo-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28383_hsa-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30060_ppa-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30169_ptr-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30774_ppy-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>31404_lca-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>31444_oan-mir-27a:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 51 tgttcacagtggctaagttc 70
>31797_mmu-mir-27a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>32680_rno-mir-27a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>33154_bta-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>33155_bta-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>33931_ssc-mir-27a:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>34237_dre-mir-27a:mirbase
Length = 131
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 77 tgttcacagtggctaagttc 96
>34241_dre-mir-27e:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttc 60
||||||||||||||||||||
Sbjct: 63 tgttcacagtggctaagttc 82
>34239_dre-mir-27c:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttctgc 63
|||||||||||| ||||||||||
Sbjct: 54 tgttcacagtggttaagttctgc 76
>34567_fru-mir-27c:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttctgc 63
|||||||||||| ||||||||||
Sbjct: 52 tgttcacagtggttaagttctgc 74
>34714_tni-mir-27c:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 41 tgttcacagtggctaagttctgc 63
|||||||||||| ||||||||||
Sbjct: 50 tgttcacagtggttaagttctgc 72
