miRNEST 2.0, an integrative microRNA resource :: BLAST
>26970_eca-mir-29a:mirbase
Length = 65
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 64
>27493_age-mir-29a:mirbase
Length = 64
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 63
>27553_lla-mir-29a:mirbase
Length = 64
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 63
>27601_sla-mir-29a:mirbase
Length = 64
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 63
>27676_mml-mir-29a:mirbase
Length = 64
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 63
>28189_mne-mir-29a:mirbase
Length = 64
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 63
>28275_ggo-mir-29a:mirbase
Length = 64
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 63
>28387_hsa-mir-29a:mirbase
Length = 64
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 63
>30062_ppa-mir-29a:mirbase
Length = 64
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 63
>30172_ptr-mir-29a:mirbase
Length = 64
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 63
>30777_ppy-mir-29a:mirbase
Length = 64
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 63
>33158_bta-mir-29a:mirbase
Length = 64
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 63
>33935_ssc-mir-29a:mirbase
Length = 86
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 74
>31802_mmu-mir-29a:mirbase
Length = 88
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 16 actgatttcttttggtgttcagagtcaatagaattttctagcaccatctgaaatcggtta 75
>32683_rno-mir-29a:mirbase
Length = 88
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 16 actgatttcttttggtgttcagagtcaatagaattttctagcaccatctgaaatcggtta 75
>33044_rno-mir-3556a:mirbase
Length = 118
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Minus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 85 actgatttcttttggtgttcagagtcaatagaattttctagcaccatctgaaatcggtta 26
>27354_mdo-mir-29a:mirbase
Length = 64
Score = 103 bits (52), Expect = 1e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 4 actgatttcttttggtgttcagagtcaatatcattttctagcaccatttgaaatcggtta 63
>31446_oan-mir-29a-1:mirbase
Length = 118
Score = 103 bits (52), Expect = 1e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 32 actgatttcttttggtgttcagagtcaatatcattttctagcaccatttgaaatcggtta 91
>25911_gga-mir-29a:mirbase
Length = 89
Score = 95.6 bits (48), Expect = 3e-21
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
|||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 17 actgatttcttttggtgttcagagtcaataatattttctagcaccatttgaaatcggtta 76
>26417_tgu-mir-29a-1:mirbase
Length = 71
Score = 87.7 bits (44), Expect = 8e-19
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
|||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||
Sbjct: 3 actgatttcttttggtgttcagagtcaataataatttctagcaccatttgaaatcggtta 62
>34569_fru-mir-29a-1:mirbase
Length = 71
Score = 63.9 bits (32), Expect = 1e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
|||||||||||||||||||||||||| | | ||||||||||||| ||||||||||||
Sbjct: 7 actgatttcttttggtgttcagagtccaattctgtttctagcaccatttgaaatcggtta 66
>25727_xtr-mir-29a:mirbase
Length = 87
Score = 58.0 bits (29), Expect = 7e-10
Identities = 53/60 (88%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||| |||||||||||||| | | |||||||||||||| ||||||||||||
Sbjct: 17 actgatttcttctggtgttcagagtc--ttttgttttctagcaccatttgaaatcggtta 74
>34716_tni-mir-29a-1:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 7e-10
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 4 gatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||| | | ||||||||||||| ||||||||||||
Sbjct: 10 gatttcttttggtgttcagagtccaattctgtttctagcaccatttgaaatcggtta 66
>34243_dre-mir-29a-2:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 2e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 4 gatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||||||||||||||||||| | ||||||||||||| ||||||||||||
Sbjct: 10 gatttcttttggtgttcagagtcttttggggtttctagcaccatttgaaatcggtta 66
>26418_tgu-mir-29a-2:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 4 gatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||| ||||||||||||||| | || ||||||||||| ||||||||||||
Sbjct: 6 gatttctcttggtgttcagagtctcagtttttgtctagcaccatttgaaatcggtta 62
>31447_oan-mir-29a-2:mirbase
Length = 113
Score = 42.1 bits (21), Expect = 4e-05
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 4 gatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
||||||| ||||||||||||||| | || ||||||||||| ||||||||||||
Sbjct: 29 gatttctcttggtgttcagagtctcagttcttgtctagcaccatttgaaatcggtta 85
>34570_fru-mir-29a-2:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 36 ttctagcaccatctgaaatcggtta 60
|||||||||||| ||||||||||||
Sbjct: 81 ttctagcaccatttgaaatcggtta 105
>34717_tni-mir-29a-2:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 36 ttctagcaccatctgaaatcggtta 60
|||||||||||| ||||||||||||
Sbjct: 57 ttctagcaccatttgaaatcggtta 81
>25729_xtr-mir-29c:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 54 tctagcaccatttgaaatcggtta 77
>25914_gga-mir-29c:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 53 tctagcaccatttgaaatcggtta 76
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 4 gatttcttttggtgttcagagtc 26
||||||| |||||||||||||||
Sbjct: 20 gatttctcttggtgttcagagtc 42
>26652_cfa-mir-29c-2:mirbase
Length = 58
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 35 tctagcaccatttgaaatcggtta 58
>26651_cfa-mir-29c-1:mirbase
Length = 58
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 35 tctagcaccatttgaaatcggtta 58
>26973_eca-mir-29c:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggtta 75
>26974_eca-mir-29c-2:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggtta 75
>27679_mml-mir-29c:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggtta 75
>28390_hsa-mir-29c:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggtta 75
>30175_ptr-mir-29c:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggtta 75
>30780_ppy-mir-29c:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggtta 75
>31805_mmu-mir-29c:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggtta 75
>32686_rno-mir-29c:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggtta 75
>33045_rno-mir-3556b:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 48 tctagcaccatttgaaatcggtta 25
>33161_bta-mir-29c:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggtta 75
>33937_ssc-mir-29c:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggtta 75
>34242_dre-mir-29a-1:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 tctagcaccatctgaaatcggtta 60
||||||||||| ||||||||||||
Sbjct: 79 tctagcaccatttgaaatcggtta 102
