miRNEST 2.0, an integrative microRNA resource :: BLAST
>27685_mml-mir-30d:mirbase
Length = 69
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaag--acagcaaagctttcagtcagatgtttgct 58
||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 5 tgtaaacatccccgactggaagctgtaagacacagctaagctttcagtcagatgtttgct 64
Query: 59 gc 60
||
Sbjct: 65 gc 66
>28193_mne-mir-30d:mirbase
Length = 70
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaag--acagcaaagctttcagtcagatgtttgct 58
||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgtaagacacagctaagctttcagtcagatgtttgct 65
Query: 59 gc 60
||
Sbjct: 66 gc 67
>28281_ggo-mir-30d:mirbase
Length = 70
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaag--acagcaaagctttcagtcagatgtttgct 58
||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgtaagacacagctaagctttcagtcagatgtttgct 65
Query: 59 gc 60
||
Sbjct: 66 gc 67
>28395_hsa-mir-30d:mirbase
Length = 70
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaag--acagcaaagctttcagtcagatgtttgct 58
||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgtaagacacagctaagctttcagtcagatgtttgct 65
Query: 59 gc 60
||
Sbjct: 66 gc 67
>30068_ppa-mir-30d:mirbase
Length = 70
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaag--acagcaaagctttcagtcagatgtttgct 58
||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgtaagacacagctaagctttcagtcagatgtttgct 65
Query: 59 gc 60
||
Sbjct: 66 gc 67
>30181_ptr-mir-30d:mirbase
Length = 70
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaag--acagcaaagctttcagtcagatgtttgct 58
||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgtaagacacagctaagctttcagtcagatgtttgct 65
Query: 59 gc 60
||
Sbjct: 66 gc 67
>30785_ppy-mir-30d:mirbase
Length = 70
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaag--acagcaaagctttcagtcagatgtttgct 58
||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgtaagacacagctaagctttcagtcagatgtttgct 65
Query: 59 gc 60
||
Sbjct: 66 gc 67
>31810_mmu-mir-30d:mirbase
Length = 82
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaag--acagcaaagctttcagtcagatgtttgct 58
||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 12 tgtaaacatccccgactggaagctgtaagccacagccaagctttcagtcagatgtttgct 71
Query: 59 gc 60
||
Sbjct: 72 gc 73
>32692_rno-mir-30d:mirbase
Length = 82
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaag--acagcaaagctttcagtcagatgtttgct 58
||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 12 tgtaaacatccccgactggaagctgtaagccacagccaagctttcagtcagatgtttgct 71
Query: 59 gc 60
||
Sbjct: 72 gc 73
>33944_ssc-mir-30d:mirbase
Length = 79
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaagac--agcaaagctttcagtcagatgtttgct 58
||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 8 tgtaaacatccccgactggaagctgtaagacatagctaagctttcagtcagatgtttgct 67
Query: 59 gc 60
||
Sbjct: 68 gc 69
>26978_eca-mir-30d:mirbase
Length = 71
Score = 77.8 bits (39), Expect = 7e-16
Identities = 57/62 (91%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaagaca--gcaaagctttcagtcagatgtttgct 58
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 7 tgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttgct 66
Query: 59 gc 60
||
Sbjct: 67 gc 68
>33168_bta-mir-30d:mirbase
Length = 70
Score = 77.8 bits (39), Expect = 7e-16
Identities = 57/62 (91%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctgga--agacagcaaagctttcagtcagatgtttgct 58
||||||||||||||||||||||||| | | ||||| |||||||||||||||||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgtaccacacagctaagctttcagtcagatgtttgct 65
Query: 59 gc 60
||
Sbjct: 66 gc 67
>34722_tni-mir-30d:mirbase
Length = 86
Score = 61.9 bits (31), Expect = 4e-11
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaagacagcaaagctttcagtcagatgttt 55
||||||||||||||||||||||||| | ||||| ||||||||||| |||||||
Sbjct: 15 tgtaaacatccccgactggaagctgtcactcagcagagctttcagtctgatgttt 69
>31453_oan-mir-30d:mirbase
Length = 132
Score = 58.0 bits (29), Expect = 7e-10
Identities = 53/60 (88%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaagacagc--aaagctttcagtcagatgtttgct 58
||||||||||||||||||||||||| || | | | |||||||||||||||||||||||
Sbjct: 29 tgtaaacatccccgactggaagctgtaaaataccttcaagctttcagtcagatgtttgct 88
>34575_fru-mir-30d:mirbase
Length = 98
Score = 54.0 bits (27), Expect = 1e-08
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaagacagcaaagctttcagtcagatgttt 55
||||||||||||||||||||||||| | ||| | ||||||||||| |||||||
Sbjct: 21 tgtaaacatccccgactggaagctgtcactcagaagagctttcagtctgatgttt 75
>25920_gga-mir-30d:mirbase
Length = 64
Score = 52.0 bits (26), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 3/61 (4%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaagacagc-aaagctttcagtcagatgtttgctg 59
||||||||||||||||||||||||| | |||| |||||||||||||||||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgta--gcagcttgagctttcagtcagatgtttgctg 63
Query: 60 c 60
|
Sbjct: 64 c 64
>25736_xtr-mir-30d:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
|||||||||||||||||||||||||
Sbjct: 11 tgtaaacatccccgactggaagctg 35
>26427_tgu-mir-30d:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
|||||||||||||||||||||||||
Sbjct: 3 tgtaaacatccccgactggaagctg 27
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 agctttcagtcagatgtttgctgc 60
||||||||||||||||||||||||
Sbjct: 38 agctttcagtcagatgtttgctgc 61
>26428_tgu-mir-30d:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
|||||||||||||||||||||||||
Sbjct: 3 tgtaaacatccccgactggaagctg 27
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 agctttcagtcagatgtttgctgc 60
||||||||||||||||||||||||
Sbjct: 38 agctttcagtcagatgtttgctgc 61
>34250_dre-mir-30d:mirbase
Length = 128
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
|||||||||||||||||||||||||
Sbjct: 35 tgtaaacatccccgactggaagctg 59
>25456_pma-mir-30b:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctgg 26
|||||||||||| |||||||||||||
Sbjct: 17 tgtaaacatccctgactggaagctgg 42
>25458_pma-mir-30d:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 12 tgtaaacatccacgactggaagctg 36
>25731_xtr-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 38 gctttcagtcagatgtttgc 57
||||||||||||||||||||
Sbjct: 46 gctttcagtcagatgtttgc 65
>25732_xtr-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 38 gctttcagtcagatgtttgc 57
||||||||||||||||||||
Sbjct: 46 gctttcagtcagatgtttgc 65
>25915_gga-mir-30a:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>25916_gga-mir-30a:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>26421_tgu-mir-30a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 4e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaag 29
||||||||||| ||||||||||||||||
Sbjct: 20 tgtaaacatccttgactggaagctggaag 48
>26422_tgu-mir-30a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 4e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaag 29
||||||||||| ||||||||||||||||
Sbjct: 20 tgtaaacatccttgactggaagctggaag 48
>26423_tgu-mir-30b:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 11 tgtaaacatcctcgactggaagctg 35
>26424_tgu-mir-30b:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 11 tgtaaacatcctcgactggaagctg 35
>26653_cfa-mir-30a:mirbase
Length = 63
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 1 tgtaaacatcctcgactggaagctg 25
>27356_mdo-mir-30a:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>27680_mml-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>27681_mml-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>28278_ggo-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>28279_ggo-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>28391_hsa-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>30066_ppa-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>30065_ppa-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>30176_ptr-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>30177_ptr-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>30781_ppy-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>30782_ppy-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>31450_oan-mir-30a:mirbase
Length = 137
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 31 tgtaaacatcctcgactggaagctg 55
>31454_oan-mir-30e:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 4e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctggaag 29
||||||||||| ||||||||||||||||
Sbjct: 16 tgtaaacatccttgactggaagctggaag 44
>31806_mmu-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>32687_rno-mir-30a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctg 30
>33164_bta-mir-30a:mirbase
Length = 67
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 2 tgtaaacatcctcgactggaagctg 26
>33938_ssc-mir-30a:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 21 tgtaaacatcctcgactggaagctg 45
>33939_ssc-mir-30a:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagctg 25
||||||||||| |||||||||||||
Sbjct: 21 tgtaaacatcctcgactggaagctg 45
>25457_pma-mir-30c:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 38 gctttcagtcagatgtttgc 57
||||||||||||||||||||
Sbjct: 58 gctttcagtcagatgtttgc 77
>34247_dre-mir-30a:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 agctttcagtcagatgtttgctgc 60
||||||||||| ||||||||||||
Sbjct: 55 agctttcagtctgatgtttgctgc 78
>25455_pma-mir-30a:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgtaaacatccccgactggaagc 23
||||||||||| |||||||||||
Sbjct: 9 tgtaaacatcctcgactggaagc 31
