miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27011_eca-mir-125b:mirbase
Length = 88
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>27376_mdo-mir-125b-2:mirbase
Length = 63
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 62
Query: 61 c 61
|
Sbjct: 63 c 63
>27507_age-mir-125b-1:mirbase
Length = 88
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>27570_lla-mir-125b-1:mirbase
Length = 88
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>27615_sla-mir-125b:mirbase
Length = 88
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>27719_mml-mir-125b-1:mirbase
Length = 88
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>28208_mne-mir-125b-1:mirbase
Length = 88
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>28301_ggo-mir-125b-1:mirbase
Length = 88
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>28432_hsa-mir-125b-1:mirbase
Length = 88
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>30210_ptr-mir-125b-1:mirbase
Length = 88
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>30819_ppy-mir-125b-1:mirbase
Length = 88
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>31843_mmu-mir-125b-1:mirbase
Length = 77
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>31844_mmu-mir-125b-1:mirbase
Length = 77
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>32722_rno-mir-125b-1:mirbase
Length = 87
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>32723_rno-mir-125b-1:mirbase
Length = 87
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>33202_bta-mir-125b-1:mirbase
Length = 88
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75
>33971_ssc-mir-125b-1:mirbase
Length = 80
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 68
Query: 61 c 61
|
Sbjct: 69 c 69
>30088_ppa-mir-125b:mirbase
Length = 88
Score = 113 bits (57), Expect = 1e-26
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 15 tccctgagaccctaacttgtgatgttaaccgtttaaatccacgggttaggctcttgggag 74
Query: 61 c 61
|
Sbjct: 75 c 75