miRNEST 2.0, an integrative microRNA resource :: BLAST
>27022_eca-mir-130a:mirbase
Length = 64
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 62
Query: 61 at 62
||
Sbjct: 63 at 64
>33979_ssc-mir-130a:mirbase
Length = 79
Score = 115 bits (58), Expect = 3e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 10 gctcttttcacattgtgctactgtctgcacctatcactagcagtgcaatgttaaaagggc 69
Query: 61 at 62
||
Sbjct: 70 at 71
>27380_mdo-mir-130a:mirbase
Length = 76
Score = 107 bits (54), Expect = 8e-25
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 9 gctcttttcacattgtgctactgtctgcacctatcactagcagtgcaatgtaaaaagggc 68
Query: 61 at 62
||
Sbjct: 69 at 70
>27728_mml-mir-130a:mirbase
Length = 81
Score = 107 bits (54), Expect = 8e-25
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 15 gctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagggc 74
Query: 61 at 62
||
Sbjct: 75 at 76
>28211_mne-mir-130a:mirbase
Length = 89
Score = 107 bits (54), Expect = 8e-25
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 15 gctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagggc 74
Query: 61 at 62
||
Sbjct: 75 at 76
>28303_ggo-mir-130a:mirbase
Length = 89
Score = 107 bits (54), Expect = 8e-25
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 15 gctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagggc 74
Query: 61 at 62
||
Sbjct: 75 at 76
>28442_hsa-mir-130a:mirbase
Length = 89
Score = 107 bits (54), Expect = 8e-25
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 15 gctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagggc 74
Query: 61 at 62
||
Sbjct: 75 at 76
>30090_ppa-mir-130a:mirbase
Length = 89
Score = 107 bits (54), Expect = 8e-25
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 15 gctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagggc 74
Query: 61 at 62
||
Sbjct: 75 at 76
>30218_ptr-mir-130a:mirbase
Length = 88
Score = 107 bits (54), Expect = 8e-25
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 14 gctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagggc 73
Query: 61 at 62
||
Sbjct: 74 at 75
>30827_ppy-mir-130a:mirbase
Length = 89
Score = 107 bits (54), Expect = 8e-25
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 15 gctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagggc 74
Query: 61 at 62
||
Sbjct: 75 at 76
>33211_bta-mir-130a:mirbase
Length = 89
Score = 99.6 bits (50), Expect = 2e-22
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
|||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 15 gctcttttcacattgtgctactgtctgcgcctgtcactagcagtgcaatgttaaaagggc 74
Query: 61 at 62
||
Sbjct: 75 at 76
>31485_oan-mir-130a:mirbase
Length = 122
Score = 69.9 bits (35), Expect = 2e-13
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgt 51
|||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 31 gctcttttcacattgtgctactgtctgcgcccgtcactagcagtgcaatgt 81
>32731_rno-mir-130a:mirbase
Length = 88
Score = 67.9 bits (34), Expect = 7e-13
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
|||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||
Sbjct: 15 gctcttttcacattgtgctactgtctacacgtgtaccgagcagtgcaatgttaaaagggc 74
Query: 61 at 62
||
Sbjct: 75 at 76
>33089_rno-mir-3590:mirbase
Length = 74
Score = 67.9 bits (34), Expect = 7e-13
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
|||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||
Sbjct: 67 gctcttttcacattgtgctactgtctacacgtgtaccgagcagtgcaatgttaaaagggc 8
Query: 61 at 62
||
Sbjct: 7 at 6
>33090_rno-mir-3590:mirbase
Length = 74
Score = 67.9 bits (34), Expect = 7e-13
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
|||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||
Sbjct: 67 gctcttttcacattgtgctactgtctacacgtgtaccgagcagtgcaatgttaaaagggc 8
Query: 61 at 62
||
Sbjct: 7 at 6
>31856_mmu-mir-130a:mirbase
Length = 64
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 gctcttttcacattgtgctactgtct 26
||||||||||||||||||||||||||
Sbjct: 3 gctcttttcacattgtgctactgtct 28
>25772_xtr-mir-130a:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 agcagtgcaatgttaaaagggcat 62
||||||||||||||||||||||||
Sbjct: 51 agcagtgcaatgttaaaagggcat 74
>25949_gga-mir-130c:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 agcagtgcaatgttaaaagggcat 62
||||||||||||||||||||||||
Sbjct: 58 agcagtgcaatgttaaaagggcat 81
>26461_tgu-mir-130c:mirbase
Length = 112
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 agcagtgcaatgttaaaagggcat 62
||||||||||||||||||||||||
Sbjct: 79 agcagtgcaatgttaaaagggcat 102
>31486_oan-mir-130b:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 agcagtgcaatgttaaaagggcat 62
||||||||||||||||||||||||
Sbjct: 79 agcagtgcaatgttaaaagggcat 102
>34289_dre-mir-130a-1:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 agcagtgcaatgttaaaagggcat 62
||||||||||||||||||||||||
Sbjct: 52 agcagtgcaatgttaaaagggcat 75
>34290_dre-mir-130a-2:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 agcagtgcaatgttaaaagggcat 62
||||||||||||||||||||||||
Sbjct: 52 agcagtgcaatgttaaaagggcat 75
>25774_xtr-mir-130c:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 38 tagcagtgcaatgttaaaagggcat 62
|||||||||||| ||||||||||||
Sbjct: 42 tagcagtgcaatattaaaagggcat 66
>25947_gga-mir-130a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 39 agcagtgcaatgttaaaagggcat 62
||||||||||| ||||||||||||
Sbjct: 50 agcagtgcaatattaaaagggcat 73
>26459_tgu-mir-130a:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 39 agcagtgcaatgttaaaagggcat 62
||||||||||| ||||||||||||
Sbjct: 39 agcagtgcaatattaaaagggcat 62
>31487_oan-mir-130c:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 39 agcagtgcaatgttaaaagggcat 62
|||||||||||| |||||||||||
Sbjct: 51 agcagtgcaatggtaaaagggcat 74
>34292_dre-mir-130c-1:mirbase
Length = 141
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 39 agcagtgcaatgttaaaagggcat 62
||||||||||| ||||||||||||
Sbjct: 78 agcagtgcaatattaaaagggcat 101
>34293_dre-mir-130c-2:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 39 agcagtgcaatgttaaaagggcat 62
||||||||||| ||||||||||||
Sbjct: 48 agcagtgcaatattaaaagggcat 71
>34595_fru-mir-130:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 39 agcagtgcaatgttaaaagggcat 62
||||||||||| ||||||||||||
Sbjct: 50 agcagtgcaatattaaaagggcat 73
>34742_tni-mir-130:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 39 agcagtgcaatgttaaaagggcat 62
||||||||||| ||||||||||||
Sbjct: 47 agcagtgcaatattaaaagggcat 70
