miRNEST 2.0, an integrative microRNA resource :: BLAST
>39859_aly-MIR319b:mirbase
Length = 246
Score = 281 bits (142), Expect = 1e-76
Identities = 172/182 (94%)
Strand = Plus / Plus
Query: 29 gttggtggaggaagagagctttctttggtccactcatggagtaatatgtgagatttaatt 88
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 28 gttggtgaaggaagagagctttcttcggtccactcatggagtaatatgtgagatttaatt 87
Query: 89 gactctcgactcatccatccacataccaaatgaaagaatatgttcccatatggtaaatga 148
|||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||
Sbjct: 88 gactctcgactcattcatccaaataccaaatgaaagaacatgttctcatatggtaaatga 147
Query: 149 atgaatgattctagagacaaattgaatctttacttctctatgcttggactgaagggagct 208
||||||||| | ||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 148 atgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaagggagct 207
Query: 209 cc 210
||
Sbjct: 208 cc 209
>40070_ath-MIR319b:mirbase
Length = 172
Score = 266 bits (134), Expect = 7e-72
Identities = 161/170 (94%)
Strand = Plus / Plus
Query: 41 agagagctttctttggtccactcatggagtaatatgtgagatttaattgactctcgactc 100
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agagagctttcttcggtccactcatggagtaatatgtgagatttaattgactctcgactc 60
Query: 101 atccatccacataccaaatgaaagaatatgttcccatatggtaaatgaatgaatgattct 160
|| |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| |
Sbjct: 61 attcatccaaataccaaatgaaagaatttgttctcatatggtaaatgaatgaatgatgcg 120
Query: 161 agagacaaattgaatctttacttctctatgcttggactgaagggagctcc 210
||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 121 agagacaaattgagtcttcacttctctatgcttggactgaagggagctcc 170
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 63.9 bits (32), Expect = 6e-11
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 143 aaatgaatgaatgattctagagacaaattgaatctttacttctctatgcttggactgaag 202
|||||| |||||||| | ||||||||||||||||| | || |||| ||||||||||||
Sbjct: 107 aaatgagtgaatgatgcgggagacaaattgaatcttaagtttcctatacttggactgaag 166
Query: 203 ggagctcc 210
||||||||
Sbjct: 167 ggagctcc 174
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 40 aagagagctttctttggtccactcatgg 67
||||||||||||||| ||||||||||||
Sbjct: 2 aagagagctttctttagtccactcatgg 29
>41282_ctr-MIR319:mirbase
Length = 186
Score = 61.9 bits (31), Expect = 2e-10
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 141 gtaaatgaatgaatgattctagagacaaattgaatcttta-cttctctatgcttggactg 199
|||||||| |||||||| | ||||||||||||||||| | |||| || |||||||||||
Sbjct: 106 gtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttc-ctgtgcttggactg 164
Query: 200 aagggagctcc 210
|||||||||||
Sbjct: 165 aagggagctcc 175
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 60.0 bits (30), Expect = 9e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 141 gtaaatgaatgaatgattctagagacaaattgaatctttacttctctatgcttggactga 200
|||||||| |||||||| | ||||||||||| ||||| | || || ||||||||||||
Sbjct: 100 gtaaatgattgaatgatgcgggagacaaattggatcttaagctccctgtgcttggactga 159
Query: 201 agggagctcc 210
||||||||||
Sbjct: 160 agggagctcc 169
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 39 gaagagagctttctttggtccactcatgg 67
||||||||||||||| ||||||||||||
Sbjct: 8 gaagagagctttcttcagtccactcatgg 36
>40069_ath-MIR319a:mirbase
Length = 176
Score = 58.0 bits (29), Expect = 3e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 142 taaatgaatgaatgattctagagacaaattgaatctttacttctctatgcttggactgaa 201
|||||||||||||||| | |||||||||| ||| || |||||| || ||||||||||
Sbjct: 104 taaatgaatgaatgatgcggtagacaaattggatcattgattctctttgattggactgaa 163
Query: 202 gggagctcc 210
|||||||||
Sbjct: 164 gggagctcc 172
>39858_aly-MIR319a:mirbase
Length = 221
Score = 58.0 bits (29), Expect = 3e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 142 taaatgaatgaatgattctagagacaaattgaatctttacttctctatgcttggactgaa 201
|||||||||||||||| | |||||||||| ||| || |||||| || ||||||||||
Sbjct: 127 taaatgaatgaatgatgcggtagacaaattggatcattgattctctttgattggactgaa 186
Query: 202 gggagctcc 210
|||||||||
Sbjct: 187 gggagctcc 195
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 54.0 bits (27), Expect = 5e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 176 ctttacttctctatgcttggactgaagggagctcc 210
|||| ||||||| ||||||||||||||||||||||
Sbjct: 149 cttttcttctctgtgcttggactgaagggagctcc 183
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 54.0 bits (27), Expect = 5e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 176 ctttacttctctatgcttggactgaagggagctcc 210
|||| ||||||| ||||||||||||||||||||||
Sbjct: 152 cttttcttctctgtgcttggactgaagggagctcc 186
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 40 aagagagctttctttggtccactcatgga 68
|||||||||||||| |||||||||||||
Sbjct: 9 aagagagctttcttcagtccactcatgga 37
>40367_rco-MIR319a:mirbase
Length = 211
Score = 54.0 bits (27), Expect = 5e-08
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 141 gtaaatgaatgaatgattctagagacaaattgaatcttta-cttctctatgcttggactg 199
|||||||| |||||||| | ||||||||||||||||| | |||| || | |||||||||
Sbjct: 135 gtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttc-ctgtacttggactg 193
Query: 200 aagggagctcc 210
|||||||||||
Sbjct: 194 aagggagctcc 204
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 40 aagagagctttctttggtccactcatgg 67
|||||||||||||| ||||||||||||
Sbjct: 3 aagagagctttcttcagtccactcatgg 30
>40464_gma-MIR319a:mirbase
Length = 207
Score = 52.0 bits (26), Expect = 2e-07
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 145 atgaatgaatgattctagagacaaattgaatctttacttctctatgcttggactgaaggg 204
|||| |||||||| | ||||||||||||||||| | || || | ||||||||||||||
Sbjct: 122 atgagtgaatgatgcgggagacaaattgaatcttaagtttcctgtacttggactgaaggg 181
Query: 205 agctcc 210
||||||
Sbjct: 182 agctcc 187
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 40 aagagagctttctttggtccactcatgg 67
|||||||||||||| ||||||||||||
Sbjct: 19 aagagagctttcttcagtccactcatgg 46
>40369_rco-MIR319c:mirbase
Length = 188
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 181 cttctctatgcttggactgaagggagctcc 210
||||||| ||||||||||||||||||||||
Sbjct: 152 cttctctgtgcttggactgaagggagctcc 181
>42642_tae-MIR319:mirbase
Length = 211
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 175 tctttacttctctatgcttggactgaagggagctcc 210
||||| || ||| |||||||||||||||||||||||
Sbjct: 167 tctttcctcctccatgcttggactgaagggagctcc 202
>41770_bdi-MIR319:mirbase
Length = 280
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 175 tctttacttctctatgcttggactgaagggagctcc 210
||||| || ||| |||||||||||||||||||||||
Sbjct: 209 tctttcctcctccatgcttggactgaagggagctcc 244
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 189 tgcttggactgaagggagctcctt 212
||||||||||||||||||||||||
Sbjct: 173 tgcttggactgaagggagctcctt 196
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 189 tgcttggactgaagggagctcctt 212
||||||||||||||||||||||||
Sbjct: 171 tgcttggactgaagggagctcctt 194
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 48.1 bits (24), Expect = 3e-06
Identities = 69/80 (86%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 141 gtaaatgaatgaatgattctagagacaaattgaatcttta-cttctctatgcttggactg 199
|||||||| |||||||| | ||||||||||||||| | | |||| || | |||||||||
Sbjct: 109 gtaaatgagtgaatgatgcgggagacaaattgaatcctaagcttc-ctgtacttggactg 167
Query: 200 aagggagct-cctttccttt 218
||||||||| ||||||||||
Sbjct: 168 aagggagctccctttccttt 187
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 40 aagagagctttctttggtccactcatgg 67
|||||||||||||| ||||||||||||
Sbjct: 9 aagagagctttcttcagtccactcatgg 36
>40465_gma-MIR319b:mirbase
Length = 208
Score = 48.1 bits (24), Expect = 3e-06
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 143 aaatgaatgaatgattctagagacaaattgaatctttacttctctatgcttggactgaag 202
|||||| |||||||| | |||||||||||| |||| | || || | ||||||||||||
Sbjct: 121 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 180
Query: 203 ggagctcc 210
||||||||
Sbjct: 181 ggagctcc 188
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 176 ctttacttctctatgcttggactgaagggagctcc 210
|||| ||| ||| ||||||||||||||||||||||
Sbjct: 146 cttttcttgtctgtgcttggactgaagggagctcc 180
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 141 gtaaatgaatgaatgattctagagacaaattgaatcttta-cttctctatgcttggactg 199
|||||||||||| |||| | |||||||||| |||||| | |||| |||| ||||||||
Sbjct: 106 gtaaatgaatgagtgatgcgggagacaaattaaatcttaaacttc-ctatcattggactg 164
Query: 200 aagggagctcc 210
|||||||||||
Sbjct: 165 aagggagctcc 175
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 190 gcttggactgaagggagctcctt 212
|||||||||||||||||||||||
Sbjct: 408 gcttggactgaagggagctcctt 430
>40466_gma-MIR319c:mirbase
Length = 221
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 182 ttctctatgcttggactgaagggagctcctt 212
|||||| ||||||||||||| ||||||||||
Sbjct: 173 ttctctgtgcttggactgaaaggagctcctt 203
>40703_mtr-MIR319:mirbase
Length = 207
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 189 tgcttggactgaagggagctcc 210
||||||||||||||||||||||
Sbjct: 166 tgcttggactgaagggagctcc 187
>41185_aqc-MIR319:mirbase
Length = 177
Score = 42.1 bits (21), Expect = 2e-04
Identities = 62/73 (84%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 139 tggtaaatgaatgaatgattctagagacaaattgaatctt-tacttctctatgcttggac 197
||||||||||||||||||| | |||| ||||| ||||| | ||||| | | |||||||
Sbjct: 102 tggtaaatgaatgaatgatccgggagattaattggatcttatgcttct-tgtacttggac 160
Query: 198 tgaagggagctcc 210
|||||||||||||
Sbjct: 161 tgaagggagctcc 173
>40370_rco-MIR319d:mirbase
Length = 187
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctcctt 212
|||||||||||||||||||||
Sbjct: 162 ttggactgaagggagctcctt 182
>40071_ath-MIR319c:mirbase
Length = 199
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctcctt 212
|||||||||||||||||||||
Sbjct: 170 ttggactgaagggagctcctt 190
>39861_aly-MIR319d:mirbase
Length = 267
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctcctt 212
|||||||||||||||||||||
Sbjct: 204 ttggactgaagggagctcctt 224
>39860_aly-MIR319c:mirbase
Length = 271
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctcctt 212
|||||||||||||||||||||
Sbjct: 204 ttggactgaagggagctcctt 224
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 191 cttggactgaagggagctcct 211
|||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcct 160
>41637_vvi-MIR319e:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctcct 211
||||||||||||||||||||
Sbjct: 77 ttggactgaagggagctcct 96
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 191 cttggactgaagggagctcc 210
||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctcc 181
>41544_sly-MIR319:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 191 cttggactgaagggagctcc 210
||||||||||||||||||||
Sbjct: 149 cttggactgaagggagctcc 168
>41411_ptc-MIR319h:mirbase
Length = 195
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctcct 211
||||||||||||||||||||
Sbjct: 165 ttggactgaagggagctcct 184
>41408_ptc-MIR319e:mirbase
Length = 192
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctcct 211
||||||||||||||||||||
Sbjct: 164 ttggactgaagggagctcct 183
>41236_csi-MIR319:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctcct 211
||||||||||||||||||||
Sbjct: 91 ttggactgaagggagctcct 110
>41129_tcc-MIR319:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctcct 211
||||||||||||||||||||
Sbjct: 94 ttggactgaagggagctcct 113
>40368_rco-MIR319b:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 191 cttggactgaagggagctcc 210
||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctcc 172
>39740_smo-MIR319:mirbase
Length = 215
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 191 cttggactgaagggagctcc 210
||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 191 cttggactgaagggagctcc 210
||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctcc 166
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 191 cttggactgaagggagctcc 210
||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctcc 164
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 191 cttggactgaagggagctcc 210
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 191 cttggactgaagggagctcc 210
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
