miRNEST 2.0, an integrative microRNA resource :: BLAST
>26622_cfa-mir-10b:mirbase
Length = 101
Score = 135 bits (68), Expect = 4e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 73
Query: 61 ggaatata 68
||||||||
Sbjct: 74 ggaatata 81
>33910_ssc-mir-10b:mirbase
Length = 80
Score = 135 bits (68), Expect = 4e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 65
Query: 61 ggaatata 68
||||||||
Sbjct: 66 ggaatata 73
>27649_mml-mir-10b:mirbase
Length = 110
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 23 tatataccctgtagaaccgaatttgtgtggtatccatatagtcacagattcgattctagg 82
Query: 61 ggaatata 68
||||||||
Sbjct: 83 ggaatata 90
>28169_mne-mir-10b:mirbase
Length = 109
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 22 tatataccctgtagaaccgaatttgtgtggtatccatatagtcacagattcgattctagg 81
Query: 61 ggaatata 68
||||||||
Sbjct: 82 ggaatata 89
>28257_ggo-mir-10b:mirbase
Length = 110
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 23 tatataccctgtagaaccgaatttgtgtggtatccatatagtcacagattcgattctagg 82
Query: 61 ggaatata 68
||||||||
Sbjct: 83 ggaatata 90
>30750_ppy-mir-10b:mirbase
Length = 110
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 23 tatataccctgtagaaccgaatttgtgtggtatccatatagtcacagattcgattctagg 82
Query: 61 ggaatata 68
||||||||
Sbjct: 83 ggaatata 90
>31424_oan-mir-10b:mirbase
Length = 107
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 21 tatataccctgtagaaccgaatttgtgtggtattcacatagtcacagattcgattctagg 80
Query: 61 ggaatata 68
||||||||
Sbjct: 81 ggaatata 88
>31774_mmu-mir-10b:mirbase
Length = 68
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 tatataccctgtagaaccgaatttgtgtggtacccacatagtcacagattcgattctagg 60
Query: 61 ggaatata 68
||||||||
Sbjct: 61 ggaatata 68
>32657_rno-mir-10b:mirbase
Length = 109
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 22 tatataccctgtagaaccgaatttgtgtggtacccacatagtcacagattcgattctagg 81
Query: 61 ggaatata 68
||||||||
Sbjct: 82 ggaatata 89
>27332_mdo-mir-10b:mirbase
Length = 111
Score = 119 bits (60), Expect = 2e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 23 tatataccctgtagaaccgaatttgtgtggtatttacatagtcacagattcgattctagg 82
Query: 61 ggaatata 68
||||||||
Sbjct: 83 ggaatata 90
>28359_hsa-mir-10b:mirbase
Length = 110
Score = 119 bits (60), Expect = 2e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 23 tatataccctgtagaaccgaatttgtgtggtatccgtatagtcacagattcgattctagg 82
Query: 61 ggaatata 68
||||||||
Sbjct: 83 ggaatata 90
>30041_ppa-mir-10b:mirbase
Length = 110
Score = 119 bits (60), Expect = 2e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 23 tatataccctgtagaaccgaatttgtgtggtatccgtatagtcacagattcgattctagg 82
Query: 61 ggaatata 68
||||||||
Sbjct: 83 ggaatata 90
>30145_ptr-mir-10b:mirbase
Length = 109
Score = 119 bits (60), Expect = 2e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 22 tatataccctgtagaaccgaatttgtgtggtatccgtatagtcacagattcgattctagg 81
Query: 61 ggaatata 68
||||||||
Sbjct: 82 ggaatata 89
>33127_bta-mir-10b:mirbase
Length = 99
Score = 119 bits (60), Expect = 2e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 16 tatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagattcgattctagg 75
Query: 61 ggaatata 68
||||||||
Sbjct: 76 ggaatata 83
>25890_gga-mir-10b:mirbase
Length = 110
Score = 111 bits (56), Expect = 6e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||
Sbjct: 23 tatataccctgtagaaccgaatttgtgtgatattcatatagtcacagattcgattctagg 82
Query: 61 ggaatata 68
||||||||
Sbjct: 83 ggaatata 90
>34541_fru-mir-10b-1:mirbase
Length = 70
Score = 79.8 bits (40), Expect = 2e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
||||||||||||||||||||||||||||| | | || |||||||||||||||||||||
Sbjct: 2 tatataccctgtagaaccgaatttgtgtgatggcgtcaaagtcacagattcgattctagg 61
Query: 61 ggaatata 68
||| ||||
Sbjct: 62 ggagtata 69
>34690_tni-mir-10b-2:mirbase
Length = 70
Score = 71.9 bits (36), Expect = 5e-14
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
||||||||||||||||||||||||||||| | || |||||||||||||||||||||
Sbjct: 2 tatataccctgtagaaccgaatttgtgtgatcaagtcacagtcacagattcgattctagg 61
Query: 61 ggaatata 68
||| ||||
Sbjct: 62 ggagtata 69
>25695_xtr-mir-10b:mirbase
Length = 88
Score = 65.9 bits (33), Expect = 3e-12
Identities = 57/64 (89%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 5 taccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctaggggaa 64
|||||||||||||||||||||||||| | | | ||||||||||||||||||||||| |
Sbjct: 16 taccctgtagaaccgaatttgtgtgg--ttcgtacagtcacagattcgattctaggggga 73
Query: 65 tata 68
||||
Sbjct: 74 tata 77
>34198_dre-mir-10b-1:mirbase
Length = 78
Score = 58.0 bits (29), Expect = 8e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtg 29
|||||||||||||||||||||||||||||
Sbjct: 6 tatataccctgtagaaccgaatttgtgtg 34
>34197_dre-mir-10a:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgtg 29
||||||||||||||| |||||||||||||
Sbjct: 14 tatataccctgtagatccgaatttgtgtg 42
>34542_fru-mir-10b-2:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 taccctgtagaaccgaatttgtgtg 29
|||||||||||||||||||||||||
Sbjct: 13 taccctgtagaaccgaatttgtgtg 37
>34689_tni-mir-10b-1:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 taccctgtagaaccgaatttgtgtg 29
|||||||||||||||||||||||||
Sbjct: 13 taccctgtagaaccgaatttgtgtg 37
>26943_eca-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>27331_mdo-mir-10a:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 11 tatataccctgtagatccgaatttgtgt 38
>27477_age-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>27587_sla-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>27648_mml-mir-10a:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>28256_ggo-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>28358_hsa-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>30040_ppa-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>30144_ptr-mir-10a:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 17 tatataccctgtagatccgaatttgtgt 44
>31423_oan-mir-10a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 24 tatataccctgtagatccgaatttgtgt 51
>31773_mmu-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>32655_rno-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>32656_rno-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>33126_bta-mir-10a:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>33909_ssc-mir-10a:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||||||||||||
Sbjct: 5 tatataccctgtagatccgaatttgtgt 32
>34199_dre-mir-10b-2:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 taccctgtagaaccgaatttgtgt 28
||||||||||||||||||||||||
Sbjct: 16 taccctgtagaaccgaatttgtgt 39
>34201_dre-mir-10d:mirbase
Length = 118
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
|||||||||||||||||||||| |||||
Sbjct: 24 tatataccctgtagaaccgaatgtgtgt 51
>34544_fru-mir-10d:mirbase
Length = 112
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 ataccctgtagaaccgaatttgtgtg 29
||||||||||||||||||| ||||||
Sbjct: 27 ataccctgtagaaccgaatgtgtgtg 52
>34692_tni-mir-10d:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 ataccctgtagaaccgaatttgtgtg 29
||||||||||||||||||| ||||||
Sbjct: 27 ataccctgtagaaccgaatgtgtgtg 52
>24650_bfl-mir-10a:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 taccctgtagaaccgaatttgtgtg 29
||||||||||| |||||||||||||
Sbjct: 8 taccctgtagatccgaatttgtgtg 32
>25694_xtr-mir-10a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 taccctgtagaaccgaatttgtgtg 29
||||||||||| |||||||||||||
Sbjct: 22 taccctgtagatccgaatttgtgtg 46
>38853_lgi-mir-10:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 taccctgtagaaccgaatttgtgt 28
||||||||||| ||||||||||||
Sbjct: 21 taccctgtagatccgaatttgtgt 44
>25696_xtr-mir-10c:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 accctgtagaaccgaatttgtgtg 29
||||||||||| ||||||||||||
Sbjct: 8 accctgtagaatcgaatttgtgtg 31
>25889_gga-mir-10a:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 taccctgtagaaccgaatttgtgt 28
||||||||||| ||||||||||||
Sbjct: 8 taccctgtagatccgaatttgtgt 31
>26621_cfa-mir-10:mirbase
Length = 63
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 taccctgtagaaccgaatttgtgt 28
||||||||||| ||||||||||||
Sbjct: 1 taccctgtagatccgaatttgtgt 24
>30749_ppy-mir-10a:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||| ||||| ||||||||||||
Sbjct: 18 tatataccccgtagatccgaatttgtgt 45
>34200_dre-mir-10c:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tatataccctgtagaaccgaatttgtgt 28
||||||||||||||| ||| ||||||||
Sbjct: 12 tatataccctgtagatccggatttgtgt 39
>34809_spu-mir-10:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 accctgtagaaccgaatttgtgt 28
|||||||||| ||||||||||||
Sbjct: 27 accctgtagatccgaatttgtgt 49
>34866_sko-mir-10:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 5 taccctgtagaaccgaatttgtg 27
||||||||||| |||||||||||
Sbjct: 20 taccctgtagatccgaatttgtg 42
