miRNEST 2.0, an integrative microRNA resource :: BLAST
>27662_mml-mir-20b:mirbase
Length = 69
Score = 129 bits (65), Expect = 3e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 agtaccaaagtgctcatagtgcaggtagttttggcattactctactgtagtgtgggcact 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 agtaccaaagtgctcatagtgcaggtagttttggcatgactctactgtagtgtgggcact 60
Query: 61 tccagtact 69
|||||||||
Sbjct: 61 tccagtact 69
>28371_hsa-mir-20b:mirbase
Length = 69
Score = 121 bits (61), Expect = 6e-29
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 1 agtaccaaagtgctcatagtgcaggtagttttggcattactctactgtagtgtgggcact 60
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 1 agtaccaaagtgctcatagtgcaggtagttttggcatgactctactgtagtatgggcact 60
Query: 61 tccagtact 69
|||||||||
Sbjct: 61 tccagtact 69
>30763_ppy-mir-20b:mirbase
Length = 69
Score = 121 bits (61), Expect = 6e-29
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 1 agtaccaaagtgctcatagtgcaggtagttttggcattactctactgtagtgtgggcact 60
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 1 agtaccaaagtgctcatagtgcaggtagttttggcatgactctactgtagtatgggcact 60
Query: 61 tccagtact 69
|||||||||
Sbjct: 61 tccagtact 69
>30158_ptr-mir-20b:mirbase
Length = 68
Score = 119 bits (60), Expect = 3e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 1 agtaccaaagtgctcatagtgcaggtagttttggcattactctactgtagtgtgggcact 60
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 1 agtaccaaagtgctcatagtgcaggtagttttggcatgactctactgtagtatgggcact 60
Query: 61 tccagtac 68
||||||||
Sbjct: 61 tccagtac 68
>33140_bta-mir-20b:mirbase
Length = 69
Score = 105 bits (53), Expect = 4e-24
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 agtaccaaagtgctcatagtgcaggtagttttggcattactctactgtagtgtgggcact 60
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 agtaccaaagtgctcacagtgcaggtagttttggcagcgctctactgtagtgtgggcact 60
Query: 61 tccagtact 69
|||||||||
Sbjct: 61 tccagtact 69
>26634_cfa-mir-20b:mirbase
Length = 68
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 gtaccaaagtgctcatagtgcaggtagttttggcattactctactgtagtgtgggcactt 61
||||||||||||||| |||||||||||| | ||| || ||||||||||||||||||||||
Sbjct: 1 gtaccaaagtgctcacagtgcaggtagtctgggcttttctctactgtagtgtgggcactt 60
Query: 62 cc 63
||
Sbjct: 61 cc 62
>31786_mmu-mir-20b:mirbase
Length = 80
Score = 65.9 bits (33), Expect = 3e-12
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 5 ccaaagtgctcatagtgcaggtagttttggcattactctactgtagtgtgggcacttcca 64
|||||||||||||||||||||||||||| | ||||||||| |||||| ||||||| |
Sbjct: 11 ccaaagtgctcatagtgcaggtagtttttataccactctactgcagtgtgagcacttcta 70
Query: 65 gtact 69
|||||
Sbjct: 71 gtact 75
>31437_oan-mir-20b:mirbase
Length = 106
Score = 63.9 bits (32), Expect = 1e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 agtaccaaagtgctcatagtgcaggtagtttt 32
||||||||||||||||||||||||||||||||
Sbjct: 19 agtaccaaagtgctcatagtgcaggtagtttt 50
>32669_rno-mir-20b:mirbase
Length = 72
Score = 60.0 bits (30), Expect = 2e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 5 ccaaagtgctcatagtgcaggtagttttggcattactctactgtagtgtgggcacttc 62
|||||||||||||||||||||||| ||| || ||||||||| |||||| |||||||
Sbjct: 7 ccaaagtgctcatagtgcaggtaggttttgctgcactctactgcagtgtgagcacttc 64
>32670_rno-mir-20b:mirbase
Length = 72
Score = 60.0 bits (30), Expect = 2e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 5 ccaaagtgctcatagtgcaggtagttttggcattactctactgtagtgtgggcacttc 62
|||||||||||||||||||||||| ||| || ||||||||| |||||| |||||||
Sbjct: 7 ccaaagtgctcatagtgcaggtaggttttgctgcactctactgcagtgtgagcacttc 64
>25904_gga-mir-20b:mirbase
Length = 85
Score = 56.0 bits (28), Expect = 3e-09
Identities = 63/71 (88%), Gaps = 4/71 (5%)
Strand = Plus / Plus
Query: 1 agtaccaaagtgctcatagtgcaggtagttttggcatt--actctactgtagtgtgggca 58
|||| ||||||||||||||||||||||| |||||||| || |||||||| ||||||||
Sbjct: 6 agtatcaaagtgctcatagtgcaggtag-cttggcattggac-ctactgtaatgtgggca 63
Query: 59 cttccagtact 69
||| |||||||
Sbjct: 64 cttacagtact 74
>25658_xla-mir-20:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 ccaaagtgctcatagtgcaggtagtt 30
||||||||||||||||||||||||||
Sbjct: 7 ccaaagtgctcatagtgcaggtagtt 32
>25711_xtr-mir-20b:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 ccaaagtgctcatagtgcaggtagtt 30
||||||||||||||||||||||||||
Sbjct: 7 ccaaagtgctcatagtgcaggtagtt 32
>26410_tgu-mir-20b:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 agtaccaaagtgctcatagtgcaggtag 28
|||| |||||||||||||||||||||||
Sbjct: 6 agtatcaaagtgctcatagtgcaggtag 33
>25438_pma-mir-20a:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 ccaaagtgctcatagtgcaggtagtt 30
|||||||||| |||||||||||||||
Sbjct: 15 ccaaagtgcttatagtgcaggtagtt 40
>25710_xtr-mir-20a:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagtttt 32
|||||||| |||||||||||||||||
Sbjct: 15 aaagtgcttatagtgcaggtagtttt 40
>34701_tni-mir-20:mirbase
Length = 73
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagtttt 32
|||||||| |||||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagtttt 34
>34219_dre-mir-20b:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 ccaaagtgctcatagtgcaggtagt 29
|||||||||||| ||||||||||||
Sbjct: 19 ccaaagtgctcacagtgcaggtagt 43
>25439_pma-mir-20b:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 ccaaagtgctcatagtgcaggtag 28
|||||||||| |||||||||||||
Sbjct: 17 ccaaagtgctgatagtgcaggtag 40
>34553_fru-mir-20:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagtt 30
|||||||| |||||||||||||||
Sbjct: 10 aaagtgcttatagtgcaggtagtt 33
>25903_gga-mir-20a:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 20 aaagtgcttatagtgcaggtagt 42
>26409_tgu-mir-20a:mirbase
Length = 73
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 12 aaagtgcttatagtgcaggtagt 34
>26633_cfa-mir-20a:mirbase
Length = 59
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 2 aaagtgcttatagtgcaggtagt 24
>26955_eca-mir-20a:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagt 31
>27340_mdo-mir-20:mirbase
Length = 102
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 25 aaagtgcttatagtgcaggtagt 47
>27487_age-mir-20:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagt 31
>27548_lla-mir-20:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagt 31
>27596_sla-mir-20:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagt 31
>27661_mml-mir-20a:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagt 31
>28179_mne-mir-20:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagt 31
>28267_ggo-mir-20:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagt 31
>28370_hsa-mir-20a:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagt 31
>30051_ppa-mir-20:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagt 31
>30157_ptr-mir-20a:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagt 31
>30762_ppy-mir-20:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagt 31
>31401_lca-mir-20:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagt 31
>31436_oan-mir-20a-2:mirbase
Length = 109
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 24 aaagtgcttatagtgcaggtagt 46
>31785_mmu-mir-20a:mirbase
Length = 107
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 28 aaagtgcttatagtgcaggtagt 50
>32668_rno-mir-20a:mirbase
Length = 85
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 17 aaagtgcttatagtgcaggtagt 39
>33139_bta-mir-20a:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagt 31
>33922_ssc-mir-20:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 9 aaagtgcttatagtgcaggtagt 31
>34218_dre-mir-20a:mirbase
Length = 153
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 aaagtgctcatagtgcaggtagt 29
|||||||| ||||||||||||||
Sbjct: 52 aaagtgcttatagtgcaggtagt 74
