miRNEST 2.0, an integrative microRNA resource :: BLAST
>27668_mml-mir-24-2:mirbase
Length = 73
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 ctcccgtgcctactgagctgaaacacagttggtttgtgcagactggctcagttcagcagg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 7 ctcccgtgcctactgagctgaaacacagttggtttgtgcacactggctcagttcagcagg 66
Query: 61 aacagga 67
|||||||
Sbjct: 67 aacagga 73
>28184_mne-mir-24-2:mirbase
Length = 73
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 ctcccgtgcctactgagctgaaacacagttggtttgtgcagactggctcagttcagcagg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 7 ctcccgtgcctactgagctgaaacacagttggtttgtgcacactggctcagttcagcagg 66
Query: 61 aacagga 67
|||||||
Sbjct: 67 aacagga 73
>33928_ssc-mir-24-1:mirbase
Length = 72
Score = 123 bits (62), Expect = 2e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1 ctcccgtgcctactgagctgaaacacagttggtttgtgcagactggctcagttcagcagg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7 ctcccgtgcctactgagctgaaacacagttgatttgtgcagactggctcagttcagcagg 66
Query: 61 aacagg 66
||||||
Sbjct: 67 aacagg 72
>26640_cfa-mir-24-2:mirbase
Length = 62
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 5 cgtgcctactgagctgaaacacagttggtttgtgcagactggctcagttcagcaggaaca 64
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 cgtgcctactgagctgaaacacagttgatttgtgcagactggctcagttcagcaggaaca 60
Query: 65 gg 66
||
Sbjct: 61 gg 62
>28270_ggo-mir-24:mirbase
Length = 73
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 ctcccgtgcctactgagctgaaacacagttggtttgtgcagactggctcagttcagcagg 60
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 7 ctcccgtgcctactgagctgaaacacagttggtttgtgtacactggctcagttcagcagg 66
Query: 61 aacagg 66
||||||
Sbjct: 67 aacagg 72
>28378_hsa-mir-24-2:mirbase
Length = 73
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 ctcccgtgcctactgagctgaaacacagttggtttgtgcagactggctcagttcagcagg 60
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 7 ctcccgtgcctactgagctgaaacacagttggtttgtgtacactggctcagttcagcagg 66
Query: 61 aacagg 66
||||||
Sbjct: 67 aacagg 72
>30057_ppa-mir-24-2:mirbase
Length = 73
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 ctcccgtgcctactgagctgaaacacagttggtttgtgcagactggctcagttcagcagg 60
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 7 ctcccgtgcctactgagctgaaacacagttggtttgtgtacactggctcagttcagcagg 66
Query: 61 aacagg 66
||||||
Sbjct: 67 aacagg 72
>30164_ptr-mir-24-2:mirbase
Length = 73
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 ctcccgtgcctactgagctgaaacacagttggtttgtgcagactggctcagttcagcagg 60
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 7 ctcccgtgcctactgagctgaaacacagttggtttgtgtacactggctcagttcagcagg 66
Query: 61 aacagg 66
||||||
Sbjct: 67 aacagg 72
>30769_ppy-mir-24-2:mirbase
Length = 73
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 ctcccgtgcctactgagctgaaacacagttggtttgtgcagactggctcagttcagcagg 60
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 7 ctcccgtgcctactgagctgaaacacagttggtttgtgtacactggctcagttcagcagg 66
Query: 61 aacagg 66
||||||
Sbjct: 67 aacagg 72
>33148_bta-mir-24-2:mirbase
Length = 72
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 ctcccgtgcctactgagctgaaacacagttggtttgtgcagactggctcagttcagcagg 60
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 7 ctcccgtgcctactgagctgaaacacagttgatttgtgcacactggctcagttcagcagg 66
Query: 61 aacagg 66
||||||
Sbjct: 67 aacagg 72
>27346_mdo-mir-24-2:mirbase
Length = 73
Score = 87.7 bits (44), Expect = 9e-19
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1 ctcccgtgcctactgagctgaaacacagttggtttgtgcagactggctcagttcagcagg 60
|||| |||||||||||||||||||||||||| |||| | |||||||||||||||||||
Sbjct: 3 ctcctgtgcctactgagctgaaacacagttgctttggataaactggctcagttcagcagg 62
Query: 61 aacaggag 68
||||||||
Sbjct: 63 aacaggag 70
>31792_mmu-mir-24-2:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 8e-10
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 1 ctcccgtgcctactgagctgaaacacagttggtttgtgcagactggctcagttcagcagg 60
||||||||||||||||||||||||| |||| || | |||||||||||||||||||
Sbjct: 20 ctcccgtgcctactgagctgaaaca--gttgattccagtgcactggctcagttcagcagg 77
Query: 61 aacaggag 68
||||||||
Sbjct: 78 aacaggag 85
>32513_mmu-mir-3074-2:mirbase
Length = 83
Score = 58.0 bits (29), Expect = 8e-10
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 1 ctcccgtgcctactgagctgaaacacagttggtttgtgcagactggctcagttcagcagg 60
||||||||||||||||||||||||| |||| || | |||||||||||||||||||
Sbjct: 74 ctcccgtgcctactgagctgaaaca--gttgattccagtgcactggctcagttcagcagg 17
Query: 61 aacaggag 68
||||||||
Sbjct: 16 aacaggag 9
>32514_mmu-mir-3074-2:mirbase
Length = 83
Score = 58.0 bits (29), Expect = 8e-10
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 1 ctcccgtgcctactgagctgaaacacagttggtttgtgcagactggctcagttcagcagg 60
||||||||||||||||||||||||| |||| || | |||||||||||||||||||
Sbjct: 74 ctcccgtgcctactgagctgaaaca--gttgattccagtgcactggctcagttcagcagg 17
Query: 61 aacaggag 68
||||||||
Sbjct: 16 aacaggag 9
>25716_xtr-mir-24a:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 41 actggctcagttcagcaggaacaggag 67
>25717_xtr-mir-24a:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 41 actggctcagttcagcaggaacaggag 67
>25908_gga-mir-24:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>26413_tgu-mir-24:mirbase
Length = 132
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 99 actggctcagttcagcaggaacaggag 125
>26962_eca-mir-24-2:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>27667_mml-mir-24-1:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>28183_mne-mir-24-1:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>28377_hsa-mir-24-1:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>29230_hsa-mir-3074:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 33 actggctcagttcagcaggaacaggag 7
>29231_hsa-mir-3074:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 33 actggctcagttcagcaggaacaggag 7
>30056_ppa-mir-24-1:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>30163_ptr-mir-24-1:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 41 actggctcagttcagcaggaacaggag 67
>30768_ppy-mir-24-1:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>31442_oan-mir-24:mirbase
Length = 84
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 50 actggctcagttcagcaggaacaggag 76
>31791_mmu-mir-24-1:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>32511_mmu-mir-3074-1:mirbase
Length = 85
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 35 actggctcagttcagcaggaacaggag 9
>32512_mmu-mir-3074-1:mirbase
Length = 85
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 35 actggctcagttcagcaggaacaggag 9
>32675_rno-mir-24-1:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>32676_rno-mir-24-2:mirbase
Length = 108
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 59 actggctcagttcagcaggaacaggag 85
>33024_rno-mir-3074:mirbase
Length = 117
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 48 actggctcagttcagcaggaacaggag 22
>33147_bta-mir-24-1:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>33929_ssc-mir-24-2:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 50 actggctcagttcagcaggaacaggag 76
>34228_dre-mir-24-1:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 47 actggctcagttcagcaggaacaggag 73
>34230_dre-mir-24-3:mirbase
Length = 142
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 78 actggctcagttcagcaggaacaggag 104
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ctcccgtgcctactgagctga 21
|||||||||||||||||||||
Sbjct: 39 ctcccgtgcctactgagctga 59
>34561_fru-mir-24-1:mirbase
Length = 79
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 52 actggctcagttcagcaggaacaggag 78
>34562_fru-mir-24-1:mirbase
Length = 79
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 52 actggctcagttcagcaggaacaggag 78
>34709_tni-mir-24-1:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacaggag 68
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>34229_dre-mir-24-2:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 41 gactggctcagttcagcaggaacagg 66
||||||||||||||||||||||||||
Sbjct: 48 gactggctcagttcagcaggaacagg 73
>26639_cfa-mir-24-1:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacagg 66
|||||||||||||||||||||||||
Sbjct: 38 actggctcagttcagcaggaacagg 62
>25444_pma-mir-24:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcaggaacag 65
||||||||||||||||||||||||
Sbjct: 56 actggctcagttcagcaggaacag 79
>34231_dre-mir-24-4:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 ctggctcagttcagcaggaacagg 66
||||||||||||||||||||||||
Sbjct: 55 ctggctcagttcagcaggaacagg 78
>34563_fru-mir-24-2:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 ctggctcagttcagcaggaacagg 66
||||||||||||||||||||||||
Sbjct: 50 ctggctcagttcagcaggaacagg 73
>34710_tni-mir-24-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 ctggctcagttcagcaggaacagg 66
||||||||||||||||||||||||
Sbjct: 50 ctggctcagttcagcaggaacagg 73
>27345_mdo-mir-24-1:mirbase
Length = 57
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 42 actggctcagttcagcagga 61
||||||||||||||||||||
Sbjct: 38 actggctcagttcagcagga 57
>25660_xla-mir-24b:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 43 ctggctcagttcagcagga 61
|||||||||||||||||||
Sbjct: 44 ctggctcagttcagcagga 62
>25718_xtr-mir-24b:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 43 ctggctcagttcagcagga 61
|||||||||||||||||||
Sbjct: 44 ctggctcagttcagcagga 62
