miRNEST 2.0, an integrative microRNA resource :: BLAST
>31404_lca-mir-27a:mirbase
Length = 78
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtggctaa 64
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaaatcatgttcacagtggctaa 64
Query: 65 gttccgccccccg 77
|||||||||||||
Sbjct: 65 gttccgccccccg 77
>27673_mml-mir-27a:mirbase
Length = 78
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtggctaa 64
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaa 64
Query: 65 gttccgcccccc 76
||||||||||||
Sbjct: 65 gttccgcccccc 76
>28187_mne-mir-27a:mirbase
Length = 79
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtggctaa 64
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaa 64
Query: 65 gttccgcccccc 76
||||||||||||
Sbjct: 65 gttccgcccccc 76
>28273_ggo-mir-27a:mirbase
Length = 78
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtggctaa 64
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaa 64
Query: 65 gttccgcccccc 76
||||||||||||
Sbjct: 65 gttccgcccccc 76
>28383_hsa-mir-27a:mirbase
Length = 78
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtggctaa 64
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaa 64
Query: 65 gttccgcccccc 76
||||||||||||
Sbjct: 65 gttccgcccccc 76
>30060_ppa-mir-27a:mirbase
Length = 78
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtggctaa 64
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaa 64
Query: 65 gttccgcccccc 76
||||||||||||
Sbjct: 65 gttccgcccccc 76
>30169_ptr-mir-27a:mirbase
Length = 78
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtggctaa 64
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaa 64
Query: 65 gttccgcccccc 76
||||||||||||
Sbjct: 65 gttccgcccccc 76
>27491_age-mir-27a:mirbase
Length = 78
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtggctaa 64
||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||
Sbjct: 5 ggagcagggcttagctgcttgtgagcagggttcactccaagtcatgttcacagtggctaa 64
Query: 65 gttccgcccccc 76
||||||||||||
Sbjct: 65 gttccgcccccc 76
>27599_sla-mir-27a:mirbase
Length = 78
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtggctaa 64
||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||
Sbjct: 5 ggagcagggcttagctgcttgtgagcagggttcactccaagtcatgttcacagtggctaa 64
Query: 65 gttccgcccccc 76
||||||||||||
Sbjct: 65 gttccgcccccc 76
>30774_ppy-mir-27a:mirbase
Length = 78
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtggctaa 64
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtggctaa 64
Query: 65 gttccgcccccc 76
||||||||||||
Sbjct: 65 gttccgcccccc 76
>33931_ssc-mir-27a:mirbase
Length = 82
Score = 109 bits (55), Expect = 3e-25
Identities = 71/75 (94%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ctggggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtgg 60
||||||||||||||||||||||||||||||| |||||||| | |||| ||||||||||||
Sbjct: 5 ctggggagcagggcttagctgcttgtgagca-ggtccacagcaagtcgtgttcacagtgg 63
Query: 61 ctaagttccgccccc 75
|||||||||||||||
Sbjct: 64 ctaagttccgccccc 78
>33154_bta-mir-27a:mirbase
Length = 78
Score = 101 bits (51), Expect = 7e-23
Identities = 70/75 (93%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ctggggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtgg 60
||||||||||||||||||||||||||||||| |||||||| | | || ||||||||||||
Sbjct: 5 ctggggagcagggcttagctgcttgtgagca-ggtccacatcaaatcgtgttcacagtgg 63
Query: 61 ctaagttccgccccc 75
|||||||||||||||
Sbjct: 64 ctaagttccgccccc 78
>33155_bta-mir-27a:mirbase
Length = 78
Score = 101 bits (51), Expect = 7e-23
Identities = 70/75 (93%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ctggggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtgg 60
||||||||||||||||||||||||||||||| |||||||| | | || ||||||||||||
Sbjct: 5 ctggggagcagggcttagctgcttgtgagca-ggtccacatcaaatcgtgttcacagtgg 63
Query: 61 ctaagttccgccccc 75
|||||||||||||||
Sbjct: 64 ctaagttccgccccc 78
>26645_cfa-mir-27a:mirbase
Length = 60
Score = 95.6 bits (48), Expect = 4e-21
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 11 gggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtggctaagttccg 70
|||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||
Sbjct: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
>31797_mmu-mir-27a:mirbase
Length = 87
Score = 95.6 bits (48), Expect = 4e-21
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccaca-ccgagtcatgttcacagtggcta 63
||||||||||||||||||||||||||| |||||||| | |||| |||||||||||||||
Sbjct: 9 ggagcagggcttagctgcttgtgagcaaggtccacagcaaagtcgtgttcacagtggcta 68
Query: 64 agttccgccccc 75
||||||||||||
Sbjct: 69 agttccgccccc 80
>32680_rno-mir-27a:mirbase
Length = 87
Score = 87.7 bits (44), Expect = 1e-18
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccaca-ccgagtcatgttcacagtggcta 63
||||||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||
Sbjct: 9 ggagcagggcttagctgcttgtgagcaaggtctacagcaaagtcgtgttcacagtggcta 68
Query: 64 agttccgccccc 75
||||||||||||
Sbjct: 69 agttccgccccc 80
>31444_oan-mir-27a:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttccgcccc 74
||||||||||||||||||||||||||
Sbjct: 51 tgttcacagtggctaagttccgcccc 76
>27351_mdo-mir-27a:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttccgcccccc 76
||||||||||||||||||||||| ||||
Sbjct: 54 tgttcacagtggctaagttccgctcccc 81
>34237_dre-mir-27a:mirbase
Length = 131
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 atgttcacagtggctaagttccgc 71
||||||||||||||||||||||||
Sbjct: 76 atgttcacagtggctaagttccgc 99
>25723_xtr-mir-27a:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttccgc 71
|||||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttccgc 71
>25725_xtr-mir-27c-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 48 atgttcacagtggctaagttccgcccc 74
|||||||||||||||||||||| ||||
Sbjct: 51 atgttcacagtggctaagttccacccc 77
>25726_xtr-mir-27c-2:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 48 atgttcacagtggctaagttccgcccc 74
|||||||||||||||||||||| ||||
Sbjct: 51 atgttcacagtggctaagttccacccc 77
>25449_pma-mir-27a:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttcc 69
|||||||||||||||||||||
Sbjct: 48 tgttcacagtggctaagttcc 68
>25450_pma-mir-27b:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>25724_xtr-mir-27b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>25910_gga-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>26416_tgu-mir-27:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>26646_cfa-mir-27b:mirbase
Length = 63
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 41 tgttcacagtggctaagttc 60
>26967_eca-mir-27b:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>27352_mdo-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>27674_mml-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>28384_hsa-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>30170_ptr-mir-27b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttc 77
>30775_ppy-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>31445_oan-mir-27b:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 70 tgttcacagtggctaagttc 89
>31798_mmu-mir-27b:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>32681_rno-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>33156_bta-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>33932_ssc-mir-27b:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 50 tgttcacagtggctaagttc 69
>34238_dre-mir-27b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 55 tgttcacagtggctaagttc 74
>34240_dre-mir-27d:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 55 tgttcacagtggctaagttc 74
>34241_dre-mir-27e:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 63 tgttcacagtggctaagttc 82
>34566_fru-mir-27b:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>34568_fru-mir-27e:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttc 77
>34713_tni-mir-27b:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>34715_tni-mir-27e:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttc 77
