miRNEST 2.0, an integrative microRNA resource :: BLAST
>33935_ssc-mir-29a:mirbase
Length = 86
Score = 129 bits (65), Expect = 2e-31
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 1 gatgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gatgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcg 70
Query: 61 gttat 65
|||||
Sbjct: 71 gttat 75
>27493_age-mir-29a:mirbase
Length = 64
Score = 127 bits (64), Expect = 1e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 2 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
Query: 62 ttat 65
||||
Sbjct: 61 ttat 64
>27553_lla-mir-29a:mirbase
Length = 64
Score = 127 bits (64), Expect = 1e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 2 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
Query: 62 ttat 65
||||
Sbjct: 61 ttat 64
>27601_sla-mir-29a:mirbase
Length = 64
Score = 127 bits (64), Expect = 1e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 2 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
Query: 62 ttat 65
||||
Sbjct: 61 ttat 64
>27676_mml-mir-29a:mirbase
Length = 64
Score = 127 bits (64), Expect = 1e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 2 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
Query: 62 ttat 65
||||
Sbjct: 61 ttat 64
>28189_mne-mir-29a:mirbase
Length = 64
Score = 127 bits (64), Expect = 1e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 2 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
Query: 62 ttat 65
||||
Sbjct: 61 ttat 64
>28275_ggo-mir-29a:mirbase
Length = 64
Score = 127 bits (64), Expect = 1e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 2 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
Query: 62 ttat 65
||||
Sbjct: 61 ttat 64
>28387_hsa-mir-29a:mirbase
Length = 64
Score = 127 bits (64), Expect = 1e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 2 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
Query: 62 ttat 65
||||
Sbjct: 61 ttat 64
>30062_ppa-mir-29a:mirbase
Length = 64
Score = 127 bits (64), Expect = 1e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 2 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
Query: 62 ttat 65
||||
Sbjct: 61 ttat 64
>30172_ptr-mir-29a:mirbase
Length = 64
Score = 127 bits (64), Expect = 1e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 2 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
Query: 62 ttat 65
||||
Sbjct: 61 ttat 64
>30777_ppy-mir-29a:mirbase
Length = 64
Score = 127 bits (64), Expect = 1e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 2 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
Query: 62 ttat 65
||||
Sbjct: 61 ttat 64
>33158_bta-mir-29a:mirbase
Length = 64
Score = 127 bits (64), Expect = 1e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 2 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
Query: 62 ttat 65
||||
Sbjct: 61 ttat 64
>31802_mmu-mir-29a:mirbase
Length = 88
Score = 121 bits (61), Expect = 6e-29
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 1 gatgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcg 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 12 gatgactgatttcttttggtgttcagagtcaatagaattttctagcaccatctgaaatcg 71
Query: 61 gttat 65
|||||
Sbjct: 72 gttat 76
>32683_rno-mir-29a:mirbase
Length = 88
Score = 121 bits (61), Expect = 6e-29
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 1 gatgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcg 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 12 gatgactgatttcttttggtgttcagagtcaatagaattttctagcaccatctgaaatcg 71
Query: 61 gttat 65
|||||
Sbjct: 72 gttat 76
>33044_rno-mir-3556a:mirbase
Length = 118
Score = 121 bits (61), Expect = 6e-29
Identities = 64/65 (98%)
Strand = Plus / Minus
Query: 1 gatgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcg 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 89 gatgactgatttcttttggtgttcagagtcaatagaattttctagcaccatctgaaatcg 30
Query: 61 gttat 65
|||||
Sbjct: 29 gttat 25
>26648_cfa-mir-29a:mirbase
Length = 60
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 5 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60
>31446_oan-mir-29a-1:mirbase
Length = 118
Score = 113 bits (57), Expect = 1e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 1 gatgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcg 60
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 28 gatgactgatttcttttggtgttcagagtcaatatcattttctagcaccatttgaaatcg 87
Query: 61 gttat 65
|||||
Sbjct: 88 gttat 92
>27354_mdo-mir-29a:mirbase
Length = 64
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 2 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 61
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 1 atgactgatttcttttggtgttcagagtcaatatcattttctagcaccatttgaaatcgg 60
Query: 62 ttat 65
||||
Sbjct: 61 ttat 64
>25911_gga-mir-29a:mirbase
Length = 89
Score = 105 bits (53), Expect = 4e-24
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 1 gatgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcg 60
|||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 13 gatgactgatttcttttggtgttcagagtcaataatattttctagcaccatttgaaatcg 72
Query: 61 gttat 65
|||||
Sbjct: 73 gttat 77
>26417_tgu-mir-29a-1:mirbase
Length = 71
Score = 93.7 bits (47), Expect = 1e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 3 tgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggt 62
|||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||
Sbjct: 1 tgactgatttcttttggtgttcagagtcaataataatttctagcaccatttgaaatcggt 60
Query: 63 tat 65
|||
Sbjct: 61 tat 63
>25727_xtr-mir-29a:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 8e-13
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 1 gatgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcg 60
||||||||||||||| |||||||||||||| | | |||||||||||||| ||||||||
Sbjct: 13 gatgactgatttcttctggtgttcagagtc--ttttgttttctagcaccatttgaaatcg 70
Query: 61 gttat 65
|||||
Sbjct: 71 gttat 75
>34569_fru-mir-29a-1:mirbase
Length = 71
Score = 67.9 bits (34), Expect = 8e-13
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 3 tgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggt 62
|||||||||||||||||||||||||||| | | ||||||||||||| ||||||||||
Sbjct: 5 tgactgatttcttttggtgttcagagtccaattctgtttctagcaccatttgaaatcggt 64
Query: 63 ta 64
||
Sbjct: 65 ta 66
>34716_tni-mir-29a-1:mirbase
Length = 72
Score = 60.0 bits (30), Expect = 2e-10
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 3 tgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggt 62
|||| ||||||||||||||||||||||| | | ||||||||||||| ||||||||||
Sbjct: 5 tgaccgatttcttttggtgttcagagtccaattctgtttctagcaccatttgaaatcggt 64
Query: 63 ta 64
||
Sbjct: 65 ta 66
>34243_dre-mir-29a-2:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 5e-08
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 3 tgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggt 62
|||| ||||||||||||||||||||||| | ||||||||||||| ||||||||||
Sbjct: 5 tgaccgatttcttttggtgttcagagtcttttggggtttctagcaccatttgaaatcggt 64
Query: 63 ta 64
||
Sbjct: 65 ta 66
>26418_tgu-mir-29a-2:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 3e-06
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 3 tgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggt 62
|||| ||||||| ||||||||||||||| | || ||||||||||| ||||||||||
Sbjct: 1 tgaccgatttctcttggtgttcagagtctcagtttttgtctagcaccatttgaaatcggt 60
Query: 63 tat 65
|||
Sbjct: 61 tat 63
>31447_oan-mir-29a-2:mirbase
Length = 113
Score = 46.1 bits (23), Expect = 3e-06
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 3 tgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggt 62
|||| ||||||| ||||||||||||||| | || ||||||||||| ||||||||||
Sbjct: 24 tgaccgatttctcttggtgttcagagtctcagttcttgtctagcaccatttgaaatcggt 83
Query: 63 tat 65
|||
Sbjct: 84 tat 86
>34570_fru-mir-29a-2:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 ttctagcaccatctgaaatcggttat 65
|||||||||||| |||||||||||||
Sbjct: 81 ttctagcaccatttgaaatcggttat 106
>34717_tni-mir-29a-2:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 ttctagcaccatctgaaatcggttat 65
|||||||||||| |||||||||||||
Sbjct: 57 ttctagcaccatttgaaatcggttat 82
>25451_pma-mir-29a:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 4e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 gatgactgatttcttttggtgttcagagt 29
|||||||||||||| |||||||| |||||
Sbjct: 6 gatgactgatttctcttggtgtttagagt 34
>25729_xtr-mir-29c:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggttat 65
||||||||||| |||||||||||||
Sbjct: 54 tctagcaccatttgaaatcggttat 78
>25914_gga-mir-29c:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggttat 65
||||||||||| |||||||||||||
Sbjct: 53 tctagcaccatttgaaatcggttat 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 3 tgactgatttcttttggtgttcagagtc 30
|||| ||||||| |||||||||||||||
Sbjct: 15 tgaccgatttctcttggtgttcagagtc 42
>26973_eca-mir-29c:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggttat 65
||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76
>26974_eca-mir-29c-2:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggttat 65
||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76
>27679_mml-mir-29c:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggttat 65
||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76
>28390_hsa-mir-29c:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggttat 65
||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76
>30175_ptr-mir-29c:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggttat 65
||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76
>30780_ppy-mir-29c:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggttat 65
||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76
>31805_mmu-mir-29c:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggttat 65
||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76
>32686_rno-mir-29c:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggttat 65
||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76
>33045_rno-mir-3556b:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 41 tctagcaccatctgaaatcggttat 65
||||||||||| |||||||||||||
Sbjct: 48 tctagcaccatttgaaatcggttat 24
>33161_bta-mir-29c:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggttat 65
||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76
>33937_ssc-mir-29c:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggttat 65
||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76
>34242_dre-mir-29a-1:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggttat 65
||||||||||| |||||||||||||
Sbjct: 79 tctagcaccatttgaaatcggttat 103
>26652_cfa-mir-29c-2:mirbase
Length = 58
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggtta 64
||||||||||| ||||||||||||
Sbjct: 35 tctagcaccatttgaaatcggtta 58
>26651_cfa-mir-29c-1:mirbase
Length = 58
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 41 tctagcaccatctgaaatcggtta 64
||||||||||| ||||||||||||
Sbjct: 35 tctagcaccatttgaaatcggtta 58