miRNEST 2.0, an integrative microRNA resource :: BLAST
>26656_cfa-mir-30c-2:mirbase
Length = 62
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 tgtaaacatcctacactctcagctgtggaaagtaagaaagctgggagaaggctgtttact 60
>27556_lla-mir-30c:mirbase
Length = 72
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7 tgtaaacatcctacactctcagctgtggaaagtaagaaagctgggagaaggctgtttact 66
>27684_mml-mir-30c-2:mirbase
Length = 72
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7 tgtaaacatcctacactctcagctgtggaaagtaagaaagctgggagaaggctgtttact 66
>28192_mne-mir-30c:mirbase
Length = 72
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7 tgtaaacatcctacactctcagctgtggaaagtaagaaagctgggagaaggctgtttact 66
>28394_hsa-mir-30c-2:mirbase
Length = 72
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7 tgtaaacatcctacactctcagctgtggaaagtaagaaagctgggagaaggctgtttact 66
>30180_ptr-mir-30c-2:mirbase
Length = 72
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7 tgtaaacatcctacactctcagctgtggaaagtaagaaagctgggagaaggctgtttact 66
>33943_ssc-mir-30c-2:mirbase
Length = 80
Score = 111 bits (56), Expect = 5e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 10 tgtaaacatcctacactctcagctgtggaaagtaagaaagctgggagaaggctgtttact 69
>25919_gga-mir-30c-2:mirbase
Length = 72
Score = 103 bits (52), Expect = 1e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 7 tgtaaacatcctacactctcagctgtggaaactaagaaagctgggagaaggctgtttact 66
>26425_tgu-mir-30c:mirbase
Length = 72
Score = 103 bits (52), Expect = 1e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 1 tgtaaacatcctacactctcagctgtggaaactaagaaagctgggagaaggctgtttact 60
>26426_tgu-mir-30c:mirbase
Length = 72
Score = 103 bits (52), Expect = 1e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 1 tgtaaacatcctacactctcagctgtggaaactaagaaagctgggagaaggctgtttact 60
>31809_mmu-mir-30c-2:mirbase
Length = 84
Score = 103 bits (52), Expect = 1e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 14 tgtaaacatcctacactctcagctgtgaaaagtaagaaagctgggagaaggctgtttact 73
>32691_rno-mir-30c-2:mirbase
Length = 84
Score = 103 bits (52), Expect = 1e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 14 tgtaaacatcctacactctcagctgtgaaaagtaagaaagctgggagaaggctgtttact 73
>33170_bta-mir-30f:mirbase
Length = 84
Score = 95.6 bits (48), Expect = 3e-21
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
|||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 14 tgtaaacaccctacactctcagctgtgcacagtgagaaagctgggagaaggctgtttact 73
>31452_oan-mir-30c:mirbase
Length = 122
Score = 87.7 bits (44), Expect = 8e-19
Identities = 57/60 (95%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 31 tgtaaacatcctacactctcagctgtagat-gtgagaaagctgggagaaggctgtttact 89
>25735_xtr-mir-30c-2:mirbase
Length = 78
Score = 73.8 bits (37), Expect = 1e-14
Identities = 55/60 (91%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtggaaagtgagaaagctgggagaaggctgtttact 60
||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||
Sbjct: 14 tgtaaacatcctacactctcagctgtggaaa--tacaaagctgggggaaggctgtttact 71
>25734_xtr-mir-30c-1:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtg 27
|||||||||||||||||||||||||||
Sbjct: 17 tgtaaacatcctacactctcagctgtg 43
>25918_gga-mir-30c-1:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtg 27
|||||||||||||||||||||||||||
Sbjct: 17 tgtaaacatcctacactctcagctgtg 43
>26655_cfa-mir-30c-1:mirbase
Length = 61
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtg 27
|||||||||||||||||||||||||||
Sbjct: 1 tgtaaacatcctacactctcagctgtg 27
>26976_eca-mir-30c:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtg 27
|||||||||||||||||||||||||||
Sbjct: 17 tgtaaacatcctacactctcagctgtg 43
>27683_mml-mir-30c-1:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtg 27
|||||||||||||||||||||||||||
Sbjct: 17 tgtaaacatcctacactctcagctgtg 43
>28393_hsa-mir-30c-1:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtg 27
|||||||||||||||||||||||||||
Sbjct: 17 tgtaaacatcctacactctcagctgtg 43
>30179_ptr-mir-30c-1:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtg 27
|||||||||||||||||||||||||||
Sbjct: 16 tgtaaacatcctacactctcagctgtg 42
>30784_ppy-mir-30c-1:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtg 27
|||||||||||||||||||||||||||
Sbjct: 17 tgtaaacatcctacactctcagctgtg 43
>31808_mmu-mir-30c-1:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtg 27
|||||||||||||||||||||||||||
Sbjct: 17 tgtaaacatcctacactctcagctgtg 43
>32690_rno-mir-30c-1:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtg 27
|||||||||||||||||||||||||||
Sbjct: 17 tgtaaacatcctacactctcagctgtg 43
>33167_bta-mir-30c:mirbase
Length = 105
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtg 27
|||||||||||||||||||||||||||
Sbjct: 26 tgtaaacatcctacactctcagctgtg 52
>33942_ssc-mir-30c-1:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtg 27
|||||||||||||||||||||||||||
Sbjct: 10 tgtaaacatcctacactctcagctgtg 36
>34249_dre-mir-30c:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctg 25
|||||||||||||||||||||||||
Sbjct: 11 tgtaaacatcctacactctcagctg 35
>25460_pma-mir-30f-1:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtg 27
|||||||| ||||||||||||||||||
Sbjct: 10 tgtaaacaccctacactctcagctgtg 36
>25462_pma-mir-30g:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctgtg 27
|||||||||||| ||||||||||||||
Sbjct: 12 tgtaaacatccttcactctcagctgtg 38
>25461_pma-mir-30f-2:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctcagctg 25
|||||||| ||||||||||||||||
Sbjct: 11 tgtaaacaccctacactctcagctg 35
>34574_fru-mir-30c:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctc 20
||||||||||||||||||||
Sbjct: 9 tgtaaacatcctacactctc 28
>34721_tni-mir-30c:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgtaaacatcctacactctc 20
||||||||||||||||||||
Sbjct: 10 tgtaaacatcctacactctc 29
