miRNEST 2.0, an integrative microRNA resource :: BLAST
>33944_ssc-mir-30d:mirbase
Length = 79
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 5 gttgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttg 64
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 6 gttgtaaacatccccgactggaagctgtaagacatagctaagctttcagtcagatgtttg 65
Query: 65 ctgc 68
||||
Sbjct: 66 ctgc 69
>27685_mml-mir-30d:mirbase
Length = 69
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 5 gttgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttg 64
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 3 gttgtaaacatccccgactggaagctgtaagacacagctaagctttcagtcagatgtttg 62
Query: 65 ctgc 68
||||
Sbjct: 63 ctgc 66
>28193_mne-mir-30d:mirbase
Length = 70
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 5 gttgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttg 64
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 4 gttgtaaacatccccgactggaagctgtaagacacagctaagctttcagtcagatgtttg 63
Query: 65 ctgc 68
||||
Sbjct: 64 ctgc 67
>28281_ggo-mir-30d:mirbase
Length = 70
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 5 gttgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttg 64
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 4 gttgtaaacatccccgactggaagctgtaagacacagctaagctttcagtcagatgtttg 63
Query: 65 ctgc 68
||||
Sbjct: 64 ctgc 67
>28395_hsa-mir-30d:mirbase
Length = 70
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 5 gttgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttg 64
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 4 gttgtaaacatccccgactggaagctgtaagacacagctaagctttcagtcagatgtttg 63
Query: 65 ctgc 68
||||
Sbjct: 64 ctgc 67
>30068_ppa-mir-30d:mirbase
Length = 70
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 5 gttgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttg 64
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 4 gttgtaaacatccccgactggaagctgtaagacacagctaagctttcagtcagatgtttg 63
Query: 65 ctgc 68
||||
Sbjct: 64 ctgc 67
>30181_ptr-mir-30d:mirbase
Length = 70
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 5 gttgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttg 64
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 4 gttgtaaacatccccgactggaagctgtaagacacagctaagctttcagtcagatgtttg 63
Query: 65 ctgc 68
||||
Sbjct: 64 ctgc 67
>30785_ppy-mir-30d:mirbase
Length = 70
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 5 gttgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttg 64
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 4 gttgtaaacatccccgactggaagctgtaagacacagctaagctttcagtcagatgtttg 63
Query: 65 ctgc 68
||||
Sbjct: 64 ctgc 67
>33168_bta-mir-30d:mirbase
Length = 70
Score = 87.7 bits (44), Expect = 9e-19
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 5 gttgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttg 64
|||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 4 gttgtaaacatccccgactggaagctgtaccacacagctaagctttcagtcagatgtttg 63
Query: 65 ctgc 68
||||
Sbjct: 64 ctgc 67
>31810_mmu-mir-30d:mirbase
Length = 82
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttgct 66
|||||||||||||||||||||||||| || || || |||||||||||||||||||||||
Sbjct: 12 tgtaaacatccccgactggaagctgtaagccacagccaagctttcagtcagatgtttgct 71
Query: 67 gc 68
||
Sbjct: 72 gc 73
>32692_rno-mir-30d:mirbase
Length = 82
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttgct 66
|||||||||||||||||||||||||| || || || |||||||||||||||||||||||
Sbjct: 12 tgtaaacatccccgactggaagctgtaagccacagccaagctttcagtcagatgtttgct 71
Query: 67 gc 68
||
Sbjct: 72 gc 73
>26657_cfa-mir-30d:mirbase
Length = 60
Score = 77.8 bits (39), Expect = 9e-16
Identities = 57/62 (91%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttgct 66
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 1 tgtaaacatccccgactggaagctggaagaca--gcaaagctttcagtcagatgtttgct 58
Query: 67 gc 68
||
Sbjct: 59 gc 60
>31453_oan-mir-30d:mirbase
Length = 132
Score = 60.0 bits (30), Expect = 2e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 1 tgtggttgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatg 60
||||| |||||||||||||||||||||||||| | | | |||||||||||||||||
Sbjct: 23 tgtggctgtaaacatccccgactggaagctgtaaaataccttcaagctttcagtcagatg 82
Query: 61 tttgct 66
||||||
Sbjct: 83 tttgct 88
>25736_xtr-mir-30d:mirbase
Length = 81
Score = 58.0 bits (29), Expect = 8e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtgag 35
|||||||||||||||||||||||||||||
Sbjct: 11 tgtaaacatccccgactggaagctgtgag 39
>26427_tgu-mir-30d:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 3e-09
Identities = 54/62 (87%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttgct 66
|||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 3 tgtaaacatccccgactggaagctgt---acctgctccagctttcagtcagatgtttgct 59
Query: 67 gc 68
||
Sbjct: 60 gc 61
>26428_tgu-mir-30d:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 3e-09
Identities = 54/62 (87%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtgagacatggctaagctttcagtcagatgtttgct 66
|||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 3 tgtaaacatccccgactggaagctgt---acctgctccagctttcagtcagatgtttgct 59
Query: 67 gc 68
||
Sbjct: 60 gc 61
>34250_dre-mir-30d:mirbase
Length = 128
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtg 33
|||||||||||||||||||||||||||
Sbjct: 35 tgtaaacatccccgactggaagctgtg 61
>25920_gga-mir-30d:mirbase
Length = 64
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgt 32
||||||||||||||||||||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgt 31
>34575_fru-mir-30d:mirbase
Length = 98
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgt 32
||||||||||||||||||||||||||
Sbjct: 21 tgtaaacatccccgactggaagctgt 46
>34722_tni-mir-30d:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgt 32
||||||||||||||||||||||||||
Sbjct: 15 tgtaaacatccccgactggaagctgt 40
>33164_bta-mir-30a:mirbase
Length = 67
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtgag 35
||||||||||| |||||||||||||||||
Sbjct: 2 tgtaaacatcctcgactggaagctgtgag 30
>33938_ssc-mir-30a:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtgag 35
||||||||||| |||||||||||||||||
Sbjct: 21 tgtaaacatcctcgactggaagctgtgag 49
>33939_ssc-mir-30a:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtgag 35
||||||||||| |||||||||||||||||
Sbjct: 21 tgtaaacatcctcgactggaagctgtgag 49
>25731_xtr-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 46 gctttcagtcagatgtttgc 65
||||||||||||||||||||
Sbjct: 46 gctttcagtcagatgtttgc 65
>25732_xtr-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 46 gctttcagtcagatgtttgc 65
||||||||||||||||||||
Sbjct: 46 gctttcagtcagatgtttgc 65
>25915_gga-mir-30a:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>25916_gga-mir-30a:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>26423_tgu-mir-30b:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 11 tgtaaacatcctcgactggaagctgtga 38
>26424_tgu-mir-30b:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 11 tgtaaacatcctcgactggaagctgtga 38
>26653_cfa-mir-30a:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 1 tgtaaacatcctcgactggaagctgtga 28
>27356_mdo-mir-30a:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>27680_mml-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>27681_mml-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>28278_ggo-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>28279_ggo-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>28391_hsa-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>30066_ppa-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>30065_ppa-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>30176_ptr-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>30177_ptr-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>30781_ppy-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>30782_ppy-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>31450_oan-mir-30a:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 31 tgtaaacatcctcgactggaagctgtga 58
>31806_mmu-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>32687_rno-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| ||||||||||||||||
Sbjct: 6 tgtaaacatcctcgactggaagctgtga 33
>25456_pma-mir-30b:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctg 31
|||||||||||| ||||||||||||
Sbjct: 17 tgtaaacatccctgactggaagctg 41
>25458_pma-mir-30d:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctg 31
||||||||||| |||||||||||||
Sbjct: 12 tgtaaacatccacgactggaagctg 36
>25921_gga-mir-30e:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtgag 35
||||||||||| ||||||||||||||||
Sbjct: 19 tgtaaacatccttgactggaagctgtgag 47
>33945_ssc-mir-30e:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtgag 35
||||||||||| ||||||||||||||||
Sbjct: 9 tgtaaacatccttgactggaagctgtgag 37
>33946_ssc-mir-30e:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtgag 35
||||||||||| ||||||||||||||||
Sbjct: 9 tgtaaacatccttgactggaagctgtgag 37
>25457_pma-mir-30c:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 46 gctttcagtcagatgtttgc 65
||||||||||||||||||||
Sbjct: 58 gctttcagtcagatgtttgc 77
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtg 33
||||||||||| |||||| ||||||||
Sbjct: 13 tgtaaacatcctcgactgaaagctgtg 39
>25737_xtr-mir-30e:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagctgtga 34
||||||||||| |||||||||||||||
Sbjct: 17 tgtaaacatccttgactggaagctgtga 44
>34247_dre-mir-30a:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 gttgtaaacatccccgactggaag 28
||||||||||| ||||||||||||
Sbjct: 12 gttgtaaacattcccgactggaag 35
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 45 agctttcagtcagatgtttgctgc 68
||||||||||| ||||||||||||
Sbjct: 55 agctttcagtctgatgtttgctgc 78
>25455_pma-mir-30a:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 tgtaaacatccccgactggaagc 29
||||||||||| |||||||||||
Sbjct: 9 tgtaaacatcctcgactggaagc 31
