miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>26669_cfa-mir-93:mirbase
          Length = 61

 Score =  117 bits (59), Expect = 8e-28
 Identities = 59/59 (100%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59




>27499_age-mir-93:mirbase
          Length = 80

 Score =  117 bits (59), Expect = 8e-28
 Identities = 59/59 (100%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 69




>27560_lla-mir-93:mirbase
          Length = 80

 Score =  117 bits (59), Expect = 8e-28
 Identities = 59/59 (100%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 69




>27362_mdo-mir-93:mirbase
          Length = 89

 Score =  109 bits (55), Expect = 2e-25
 Identities = 58/59 (98%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 16 caaagtgctgttcgtgcaggtagtgtgataacctgacctactgctgagctagcacttcc 74




>28288_ggo-mir-93:mirbase
          Length = 80

 Score =  109 bits (55), Expect = 2e-25
 Identities = 58/59 (98%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 11 caaagtgctgttcgtgcaggtagtgtgattacccgacctactgctgagctagcacttcc 69




>30075_ppa-mir-93:mirbase
          Length = 80

 Score =  109 bits (55), Expect = 2e-25
 Identities = 58/59 (98%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 11 caaagtgctgttcgtgcaggtagtgtgattacccgacctactgctgagctagcacttcc 69




>30192_ptr-mir-93:mirbase
          Length = 80

 Score =  109 bits (55), Expect = 2e-25
 Identities = 58/59 (98%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 11 caaagtgctgttcgtgcaggtagtgtgattacccgacctactgctgagctagcacttcc 69




>30798_ppy-mir-93:mirbase
          Length = 80

 Score =  109 bits (55), Expect = 2e-25
 Identities = 58/59 (98%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 11 caaagtgctgttcgtgcaggtagtgtgattacccgacctactgctgagctagcacttcc 69




>31822_mmu-mir-93:mirbase
          Length = 88

 Score =  109 bits (55), Expect = 2e-25
 Identities = 58/59 (98%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 15 caaagtgctgttcgtgcaggtagtgtaattacctgacctactgctgagctagcacttcc 73




>27607_sla-mir-93:mirbase
          Length = 80

 Score =  101 bits (51), Expect = 5e-23
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 11 caaagtgctgttcgtgcaggtagtgtgattacccaacctactgctgagctagcacttcc 69




>27698_mml-mir-93:mirbase
          Length = 80

 Score =  101 bits (51), Expect = 5e-23
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 11 caaagtgctgttcgtgcaggtagtgtgattaaccgacctactgctgagctagcacttcc 69




>28199_mne-mir-93:mirbase
          Length = 80

 Score =  101 bits (51), Expect = 5e-23
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 11 caaagtgctgttcgtgcaggtagtgtgattaaccgacctactgctgagctagcacttcc 69




>28408_hsa-mir-93:mirbase
          Length = 80

 Score =  101 bits (51), Expect = 5e-23
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 11 caaagtgctgttcgtgcaggtagtgtgattacccaacctactgctgagctagcacttcc 69




>33181_bta-mir-93:mirbase
          Length = 77

 Score =  101 bits (51), Expect = 5e-23
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 11 caaagtgctgttcgtgcaggtagtgtgatcacctgacctactgctgagccagcacttcc 69




>32703_rno-mir-93:mirbase
          Length = 87

 Score = 85.7 bits (43), Expect = 3e-18
 Identities = 56/59 (94%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                     
Query: 1  caaagtgctgttcgtgcaggtagtgtgattacctgacctactgctgagctagcacttcc 59
          |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||
Sbjct: 15 caaagtgctgttcgtgcaggtagtgc-attgcctgacctactgctgagctagcacttcc 72




>25750_xtr-mir-93a:mirbase
          Length = 73

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  caaagtgctgttcgtgcaggtag 23
          |||||||||||||||||||||||
Sbjct: 9  caaagtgctgttcgtgcaggtag 31




>34259_dre-mir-93:mirbase
          Length = 74

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 2  aaagtgctgttcgtgcaggtagtgtg 27
          ||||||||||| ||||||||||||||
Sbjct: 11 aaagtgctgtttgtgcaggtagtgtg 36




>25751_xtr-mir-93b:mirbase
          Length = 64

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 3  aagtgctgttcgtgcaggtag 23
          |||||||||||||||||||||
Sbjct: 5  aagtgctgttcgtgcaggtag 25