miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27365_mdo-mir-101-1:mirbase
Length = 83
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 13 ctcagttatcacagtgctgatgctgtccgttctcaaggtacagtactgtgataactgaa 71
>27502_age-mir-101:mirbase
Length = 75
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 ctcagttatcacagtgctgatgctgtctattctaaaggtacagtactgtgataactgaa 67
>27564_lla-mir-101:mirbase
Length = 75
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 ctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactgaa 67
>27611_sla-mir-101:mirbase
Length = 75
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 ctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactgaa 67
>27705_mml-mir-101-1:mirbase
Length = 75
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 ctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactgaa 67
>28202_mne-mir-101:mirbase
Length = 75
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 ctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactgaa 67
>28294_ggo-mir-101:mirbase
Length = 75
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 ctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactgaa 67
>28415_hsa-mir-101-1:mirbase
Length = 75
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 ctcagttatcacagtgctgatgctgtctattctaaaggtacagtactgtgataactgaa 67
>30081_ppa-mir-101:mirbase
Length = 75
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 ctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactgaa 67
>30199_ptr-mir-101-1:mirbase
Length = 75
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 ctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactgaa 67
>30804_ppy-mir-101:mirbase
Length = 75
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 ctcagttatcacagtgctgatgctgtctattctaaaggtacagtactgtgataactgaa 67
>30805_ppy-mir-101-1:mirbase
Length = 75
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 ctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactgaa 67
>31472_oan-mir-101-1:mirbase
Length = 81
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 12 ctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactgaa 70
>31828_mmu-mir-101a:mirbase
Length = 83
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 13 ctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactgaa 71
>32709_rno-mir-101a:mirbase
Length = 75
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 ctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactgaa 67
>33189_bta-mir-101-1:mirbase
Length = 83
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 13 ctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactgaa 71
>33960_ssc-mir-101-2:mirbase
Length = 81
Score = 101 bits (51), Expect = 5e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 12 ctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactgaa 70
>25757_xtr-mir-101a-2:mirbase
Length = 83
Score = 93.7 bits (47), Expect = 1e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 13 ctcagttatcacagtgctgatgctgtctactctaaaggtacagtactgtgataactgaa 71
>25932_gga-mir-101-2:mirbase
Length = 76
Score = 93.7 bits (47), Expect = 1e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 11 ctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactgaa 69
>26443_tgu-mir-101-2:mirbase
Length = 72
Score = 93.7 bits (47), Expect = 1e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 4 ctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactgaa 62
>26676_cfa-mir-101-1:mirbase
Length = 55
Score = 93.7 bits (47), Expect = 1e-20
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 4 agttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactga 58
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 agttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactga 55
>34265_dre-mir-101a:mirbase
Length = 81
Score = 83.8 bits (42), Expect = 1e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 2 tcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 13 tcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgataactgaa 70
>34580_fru-mir-101a:mirbase
Length = 74
Score = 60.0 bits (30), Expect = 2e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 2 tcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 10 tcagttatcacagtgctgatgctgtccccatcgaaggtacagtactgtgataactgaa 67
>34727_tni-mir-101a:mirbase
Length = 74
Score = 60.0 bits (30), Expect = 2e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 2 tcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 10 tcagttatcacagtgctgatgctgtccccatcgaaggtacagtactgtgataactgaa 67
>25756_xtr-mir-101a-1:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||
Sbjct: 50 aaaggtacagtactgtgataactgaa 75
>25931_gga-mir-101:mirbase
Length = 79
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||
Sbjct: 44 aaaggtacagtactgtgataactgaa 69
>26442_tgu-mir-101-1:mirbase
Length = 72
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||
Sbjct: 37 aaaggtacagtactgtgataactgaa 62
>26999_eca-mir-101-2:mirbase
Length = 72
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||
Sbjct: 39 aaaggtacagtactgtgataactgaa 64
>27366_mdo-mir-101-2:mirbase
Length = 79
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||
Sbjct: 44 aaaggtacagtactgtgataactgaa 69
>27706_mml-mir-101-2:mirbase
Length = 79
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||
Sbjct: 44 aaaggtacagtactgtgataactgaa 69
>28416_hsa-mir-101-2:mirbase
Length = 79
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||
Sbjct: 44 aaaggtacagtactgtgataactgaa 69
>30200_ptr-mir-101-2:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||
Sbjct: 43 aaaggtacagtactgtgataactgaa 68
>30806_ppy-mir-101-2:mirbase
Length = 79
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||
Sbjct: 44 aaaggtacagtactgtgataactgaa 69
>31473_oan-mir-101-2:mirbase
Length = 79
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||
Sbjct: 44 aaaggtacagtactgtgataactgaa 69
>33188_bta-mir-101:mirbase
Length = 79
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||
Sbjct: 44 aaaggtacagtactgtgataactgaa 69
>33959_ssc-mir-101-1:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||
Sbjct: 50 aaaggtacagtactgtgataactgaa 75
>26677_cfa-mir-101-2:mirbase
Length = 55
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactga 58
|||||||||||||||||||||||||
Sbjct: 31 aaaggtacagtactgtgataactga 55
>31829_mmu-mir-101b:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
|||||||||||||||||||| |||||
Sbjct: 56 aaaggtacagtactgtgatagctgaa 81
>32710_rno-mir-101b:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
|||||||||||||||||||| |||||
Sbjct: 56 aaaggtacagtactgtgatagctgaa 81
>31830_mmu-mir-101c:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 40 acagtactgtgataactga 58
|||||||||||||||||||
Sbjct: 46 acagtactgtgataactga 64
