miRNEST 2.0, an integrative microRNA resource :: BLAST
>33197_bta-mir-122:mirbase
Length = 85
Score = 131 bits (66), Expect = 6e-32
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 69
Query: 61 atagct 66
||||||
Sbjct: 70 atagct 75
>33967_ssc-mir-122:mirbase
Length = 85
Score = 131 bits (66), Expect = 6e-32
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 69
Query: 61 atagct 66
||||||
Sbjct: 70 atagct 75
>25937_gga-mir-122-1:mirbase
Length = 77
Score = 123 bits (62), Expect = 2e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4 agctgtggagtgtgacaatggtgtttgtgtccaatctatcaaacgccattatcacactaa 63
Query: 61 atagct 66
||||||
Sbjct: 64 atagct 69
>27714_mml-mir-122a:mirbase
Length = 85
Score = 123 bits (62), Expect = 2e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 10 agctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacactaa 69
Query: 61 atagct 66
||||||
Sbjct: 70 atagct 75
>28426_hsa-mir-122:mirbase
Length = 85
Score = 123 bits (62), Expect = 2e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 10 agctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacactaa 69
Query: 61 atagct 66
||||||
Sbjct: 70 atagct 75
>29379_hsa-mir-3591:mirbase
Length = 73
Score = 123 bits (62), Expect = 2e-29
Identities = 65/66 (98%)
Strand = Plus / Minus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 70 agctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacactaa 11
Query: 61 atagct 66
||||||
Sbjct: 10 atagct 5
>29380_hsa-mir-3591:mirbase
Length = 73
Score = 123 bits (62), Expect = 2e-29
Identities = 65/66 (98%)
Strand = Plus / Minus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 70 agctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacactaa 11
Query: 61 atagct 66
||||||
Sbjct: 10 atagct 5
>30814_ppy-mir-122:mirbase
Length = 85
Score = 123 bits (62), Expect = 2e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 10 agctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacactaa 69
Query: 61 atagct 66
||||||
Sbjct: 70 atagct 75
>31837_mmu-mir-122:mirbase
Length = 66
Score = 123 bits (62), Expect = 2e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 agctgtggagtgtgacaatggtgtttgtgtccaaaccatcaaacgccattatcacactaa 60
Query: 61 atagct 66
||||||
Sbjct: 61 atagct 66
>25938_gga-mir-122-2:mirbase
Length = 77
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4 agctatggagtgtgacaatggtgtttgtgtccaatctatcaaacgccattatcacactaa 63
Query: 61 atagct 66
||||||
Sbjct: 64 atagct 69
>26685_cfa-mir-122:mirbase
Length = 58
Score = 115 bits (58), Expect = 4e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 6 tggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaaata 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaaata 58
>30207_ptr-mir-122:mirbase
Length = 84
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 9 agctgtggagtgtgacaatggtgtttgtgtctaaattatcaaacgccattatcacactaa 68
Query: 61 atagct 66
||||||
Sbjct: 69 atagct 74
>31478_oan-mir-122:mirbase
Length = 111
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 24 agctgtggagtgtgacaatggtgtttgtgtccagtctatcaaacgccattatcacactaa 83
Query: 61 atagct 66
||||||
Sbjct: 84 atagct 89
>27371_mdo-mir-122:mirbase
Length = 74
Score = 107 bits (54), Expect = 9e-25
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
|||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4 agctatggagtgtgacaatggtgtttgtgtccagtctatcaaacgccattatcacactaa 63
Query: 61 atagct 66
||||||
Sbjct: 64 atagct 69
>26449_tgu-mir-122:mirbase
Length = 72
Score = 103 bits (52), Expect = 1e-23
Identities = 62/64 (96%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 6 agctgtggagtgtgacaatggtgtttgtgtcc-atctatcaaacgccattatcacactaa 64
Query: 61 atag 64
||||
Sbjct: 65 atag 68
>34731_tni-mir-122:mirbase
Length = 66
Score = 99.6 bits (50), Expect = 2e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 1 agctgtggagtgtgacaatggtgtttgtgtcctttctttcaaacgccattatcacactaa 60
Query: 61 atagct 66
||||||
Sbjct: 61 atagct 66
>32716_rno-mir-122:mirbase
Length = 85
Score = 91.7 bits (46), Expect = 5e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
|||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 10 agctctggagtgtgacaatggtgtttgtgtccaaaacatcaaacgccatcatcacactaa 69
Query: 61 atagct 66
| ||||
Sbjct: 70 acagct 75
>33091_rno-mir-3591:mirbase
Length = 109
Score = 91.7 bits (46), Expect = 5e-20
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
|||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 87 agctctggagtgtgacaatggtgtttgtgtccaaaacatcaaacgccatcatcacactaa 28
Query: 61 atagct 66
| ||||
Sbjct: 27 acagct 22
>25762_xtr-mir-122:mirbase
Length = 69
Score = 87.7 bits (44), Expect = 8e-19
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
|||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 2 agctatggagtgtgacaatggtgtttgtgtcagagctatcaaacgccattatcacactaa 61
>34584_fru-mir-122:mirbase
Length = 66
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
|||| ||||||||||||||||||||||| ||| || ||||||||||||||||||||||
Sbjct: 1 agctatggagtgtgacaatggtgtttgtttcctttctttcaaacgccattatcacactaa 60
Query: 61 atagct 66
||||||
Sbjct: 61 atagct 66
>34270_dre-mir-122:mirbase
Length = 76
Score = 61.9 bits (31), Expect = 5e-11
Identities = 60/68 (88%), Gaps = 5/68 (7%)
Strand = Plus / Plus
Query: 1 agctgtggagtgtgacaatggtgtttgtgtccaaact---atcaaacgccattatcacac 57
|||||||||||||||||||||||||||| || | || |||||||||||||||||||
Sbjct: 6 agctgtggagtgtgacaatggtgtttgtatc--atctgtcgtcaaacgccattatcacac 63
Query: 58 taaatagc 65
||||||||
Sbjct: 64 taaatagc 71
