miRNEST 2.0, an integrative microRNA resource :: BLAST
>26698_cfa-mir-130a:mirbase
Length = 62
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 3 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
Query: 63 at 64
||
Sbjct: 61 at 62
>33979_ssc-mir-130a:mirbase
Length = 79
Score = 119 bits (60), Expect = 2e-28
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 8 gagctcttttcacattgtgctactgtctgcacctatcactagcagtgcaatgttaaaagg 67
Query: 61 gcat 64
||||
Sbjct: 68 gcat 71
>27380_mdo-mir-130a:mirbase
Length = 76
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 7 gagctcttttcacattgtgctactgtctgcacctatcactagcagtgcaatgtaaaaagg 66
Query: 61 gcat 64
||||
Sbjct: 67 gcat 70
>27728_mml-mir-130a:mirbase
Length = 81
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 13 gagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagg 72
Query: 61 gcat 64
||||
Sbjct: 73 gcat 76
>28211_mne-mir-130a:mirbase
Length = 89
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 13 gagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagg 72
Query: 61 gcat 64
||||
Sbjct: 73 gcat 76
>28303_ggo-mir-130a:mirbase
Length = 89
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 13 gagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagg 72
Query: 61 gcat 64
||||
Sbjct: 73 gcat 76
>28442_hsa-mir-130a:mirbase
Length = 89
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 13 gagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagg 72
Query: 61 gcat 64
||||
Sbjct: 73 gcat 76
>30090_ppa-mir-130a:mirbase
Length = 89
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 13 gagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagg 72
Query: 61 gcat 64
||||
Sbjct: 73 gcat 76
>30218_ptr-mir-130a:mirbase
Length = 88
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 12 gagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagg 71
Query: 61 gcat 64
||||
Sbjct: 72 gcat 75
>30827_ppy-mir-130a:mirbase
Length = 89
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 13 gagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagg 72
Query: 61 gcat 64
||||
Sbjct: 73 gcat 76
>33211_bta-mir-130a:mirbase
Length = 89
Score = 103 bits (52), Expect = 1e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 13 gagctcttttcacattgtgctactgtctgcgcctgtcactagcagtgcaatgttaaaagg 72
Query: 61 gcat 64
||||
Sbjct: 73 gcat 76
>31485_oan-mir-130a:mirbase
Length = 122
Score = 73.8 bits (37), Expect = 1e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgt 53
|||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 29 gagctcttttcacattgtgctactgtctgcgcccgtcactagcagtgcaatgt 81
>32731_rno-mir-130a:mirbase
Length = 88
Score = 71.9 bits (36), Expect = 5e-14
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60
|||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||
Sbjct: 13 gagctcttttcacattgtgctactgtctacacgtgtaccgagcagtgcaatgttaaaagg 72
Query: 61 gcat 64
||||
Sbjct: 73 gcat 76
>33089_rno-mir-3590:mirbase
Length = 74
Score = 71.9 bits (36), Expect = 5e-14
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60
|||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||
Sbjct: 69 gagctcttttcacattgtgctactgtctacacgtgtaccgagcagtgcaatgttaaaagg 10
Query: 61 gcat 64
||||
Sbjct: 9 gcat 6
>33090_rno-mir-3590:mirbase
Length = 74
Score = 71.9 bits (36), Expect = 5e-14
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60
|||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||
Sbjct: 69 gagctcttttcacattgtgctactgtctacacgtgtaccgagcagtgcaatgttaaaagg 10
Query: 61 gcat 64
||||
Sbjct: 9 gcat 6
>31856_mmu-mir-130a:mirbase
Length = 64
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 gagctcttttcacattgtgctactgtct 28
||||||||||||||||||||||||||||
Sbjct: 1 gagctcttttcacattgtgctactgtct 28
>25772_xtr-mir-130a:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 41 agcagtgcaatgttaaaagggcat 64
||||||||||||||||||||||||
Sbjct: 51 agcagtgcaatgttaaaagggcat 74
>25949_gga-mir-130c:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 41 agcagtgcaatgttaaaagggcat 64
||||||||||||||||||||||||
Sbjct: 58 agcagtgcaatgttaaaagggcat 81
>26461_tgu-mir-130c:mirbase
Length = 112
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 41 agcagtgcaatgttaaaagggcat 64
||||||||||||||||||||||||
Sbjct: 79 agcagtgcaatgttaaaagggcat 102
>31486_oan-mir-130b:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 41 agcagtgcaatgttaaaagggcat 64
||||||||||||||||||||||||
Sbjct: 79 agcagtgcaatgttaaaagggcat 102
>34289_dre-mir-130a-1:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 41 agcagtgcaatgttaaaagggcat 64
||||||||||||||||||||||||
Sbjct: 52 agcagtgcaatgttaaaagggcat 75
>34290_dre-mir-130a-2:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 41 agcagtgcaatgttaaaagggcat 64
||||||||||||||||||||||||
Sbjct: 52 agcagtgcaatgttaaaagggcat 75
>25774_xtr-mir-130c:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 40 tagcagtgcaatgttaaaagggcat 64
|||||||||||| ||||||||||||
Sbjct: 42 tagcagtgcaatattaaaagggcat 66
>25947_gga-mir-130a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 41 agcagtgcaatgttaaaagggcat 64
||||||||||| ||||||||||||
Sbjct: 50 agcagtgcaatattaaaagggcat 73
>26459_tgu-mir-130a:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 41 agcagtgcaatgttaaaagggcat 64
||||||||||| ||||||||||||
Sbjct: 39 agcagtgcaatattaaaagggcat 62
>31487_oan-mir-130c:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 41 agcagtgcaatgttaaaagggcat 64
|||||||||||| |||||||||||
Sbjct: 51 agcagtgcaatggtaaaagggcat 74
>34292_dre-mir-130c-1:mirbase
Length = 141
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 41 agcagtgcaatgttaaaagggcat 64
||||||||||| ||||||||||||
Sbjct: 78 agcagtgcaatattaaaagggcat 101
>34293_dre-mir-130c-2:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 41 agcagtgcaatgttaaaagggcat 64
||||||||||| ||||||||||||
Sbjct: 48 agcagtgcaatattaaaagggcat 71
>34595_fru-mir-130:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 41 agcagtgcaatgttaaaagggcat 64
||||||||||| ||||||||||||
Sbjct: 50 agcagtgcaatattaaaagggcat 73
>34742_tni-mir-130:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 41 agcagtgcaatgttaaaagggcat 64
||||||||||| ||||||||||||
Sbjct: 47 agcagtgcaatattaaaagggcat 70
