miRNEST 2.0, an integrative microRNA resource :: BLAST
>27048_eca-mir-146b:mirbase
Length = 74
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 cctggctctgagaactgaattccataggctgtgagctccagcaaatgccctagggactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctggctctgagaactgaattccataggctgtgagctccagcaaatgccctagggactca 60
Query: 61 gttctggtgcccgg 74
||||||||||||||
Sbjct: 61 gttctggtgcccgg 74
>33233_bta-mir-146b:mirbase
Length = 106
Score = 139 bits (70), Expect = 3e-34
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 1 cctggctctgagaactgaattccataggctgtgagctccagcaaatgccctagggactca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 18 cctggctctgagaactgaattccataggctgtgagctctagcaaatgccctagggactca 77
Query: 61 gttctggtgcccgg 74
||||||||||||||
Sbjct: 78 gttctggtgcccgg 91
>33997_ssc-mir-146b:mirbase
Length = 99
Score = 131 bits (66), Expect = 7e-32
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 1 cctggctctgagaactgaattccataggctgtgagctccagcaaatgccctagggactca 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 13 cctggctctgagaactgaattccataggctgtgagctctagcaaatgccctaggaactca 72
Query: 61 gttctggtgcccgg 74
||||||||||||||
Sbjct: 73 gttctggtgcccgg 86
>31880_mmu-mir-146b:mirbase
Length = 109
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 cctggctctgagaactgaattccataggctgtgagctccagcaaatgccctagggactca 60
|||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||
Sbjct: 21 cctggctctgagaactgaattccataggctgtgagctctagcagacgccctagggactca 80
Query: 61 gttctggtgcccgg 74
||||||||||||||
Sbjct: 81 gttctggtgcccgg 94
>30851_ppy-mir-146b:mirbase
Length = 74
Score = 115 bits (58), Expect = 4e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 cctggctctgagaactgaattccataggctgtgagctccagcaaatgccctagggactca 60
|||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1 cctggcactgagaactgaattccataggctgtgagctctagcaaatgccctgtggactca 60
Query: 61 gttctggtgcccgg 74
||||||||||||||
Sbjct: 61 gttctggtgcccgg 74
>30852_ppy-mir-146b:mirbase
Length = 74
Score = 115 bits (58), Expect = 4e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 cctggctctgagaactgaattccataggctgtgagctccagcaaatgccctagggactca 60
|||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1 cctggcactgagaactgaattccataggctgtgagctctagcaaatgccctgtggactca 60
Query: 61 gttctggtgcccgg 74
||||||||||||||
Sbjct: 61 gttctggtgcccgg 74
>32753_rno-mir-146b:mirbase
Length = 88
Score = 109 bits (55), Expect = 3e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 1 cctggctctgagaactgaattccataggctgtgagctccagcaaatgccctagggactca 60
|||||| ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 7 cctggccctgagaactgaattccataggctgtgaactctagcagatgccctagggactca 66
Query: 61 gttctggtgcc 71
|||||||||||
Sbjct: 67 gttctggtgcc 77
>27395_mdo-mir-146b:mirbase
Length = 68
Score = 99.6 bits (50), Expect = 3e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 2 ctggctctgagaactgaattccataggctgtgagctccagcaaatgccctagggactcag 61
||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||
Sbjct: 1 ctggctctgagaactgaattccataggctgtgagctcatgcaaatgccctaggaagtcag 60
Query: 62 ttctgg 67
||||||
Sbjct: 61 ttctgg 66
>27752_mml-mir-146b:mirbase
Length = 73
Score = 99.6 bits (50), Expect = 3e-22
Identities = 69/74 (93%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 cctggctctgagaactgaattccataggctgtgagctccagcaaatgccctagggactca 60
|||||| ||||||||||||||||||||||||||||||| ||| |||||||| |||||||
Sbjct: 1 cctggcactgagaactgaattccataggctgtgagctctagc-aatgccctgtggactca 59
Query: 61 gttctggtgcccgg 74
||||||||||||||
Sbjct: 60 gttctggtgcccgg 73
>27753_mml-mir-146b:mirbase
Length = 73
Score = 99.6 bits (50), Expect = 3e-22
Identities = 69/74 (93%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 cctggctctgagaactgaattccataggctgtgagctccagcaaatgccctagggactca 60
|||||| ||||||||||||||||||||||||||||||| ||| |||||||| |||||||
Sbjct: 1 cctggcactgagaactgaattccataggctgtgagctctagc-aatgccctgtggactca 59
Query: 61 gttctggtgcccgg 74
||||||||||||||
Sbjct: 60 gttctggtgcccgg 73
>28467_hsa-mir-146b:mirbase
Length = 73
Score = 99.6 bits (50), Expect = 3e-22
Identities = 69/74 (93%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 cctggctctgagaactgaattccataggctgtgagctccagcaaatgccctagggactca 60
|||||| ||||||||||||||||||||||||||||||| ||| |||||||| |||||||
Sbjct: 1 cctggcactgagaactgaattccataggctgtgagctctagc-aatgccctgtggactca 59
Query: 61 gttctggtgcccgg 74
||||||||||||||
Sbjct: 60 gttctggtgcccgg 73
>28468_hsa-mir-146b:mirbase
Length = 73
Score = 99.6 bits (50), Expect = 3e-22
Identities = 69/74 (93%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 cctggctctgagaactgaattccataggctgtgagctccagcaaatgccctagggactca 60
|||||| ||||||||||||||||||||||||||||||| ||| |||||||| |||||||
Sbjct: 1 cctggcactgagaactgaattccataggctgtgagctctagc-aatgccctgtggactca 59
Query: 61 gttctggtgcccgg 74
||||||||||||||
Sbjct: 60 gttctggtgcccgg 73
>30239_ptr-mir-146b:mirbase
Length = 72
Score = 97.6 bits (49), Expect = 1e-21
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 2 ctggctctgagaactgaattccataggctgtgagctccagcaaatgccctagggactcag 61
||||| ||||||||||||||||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 1 ctggcactgagaactgaattccataggctgtgagctctagc-aatgccctgtggactcag 59
Query: 62 ttctggtgcccgg 74
|||||||||||||
Sbjct: 60 ttctggtgcccgg 72
>26721_cfa-mir-146b:mirbase
Length = 61
Score = 81.8 bits (41), Expect = 6e-17
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 9 tgagaactgaattccataggctgtgagctccagcaaatgccctagggactcagttctggt 68
||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 1 tgagaactgaattccataggctgtgagcttgagcaaacagcctagggactcagttctggt 60
Query: 69 g 69
|
Sbjct: 61 g 61
>31504_oan-mir-146b:mirbase
Length = 109
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 3 tggctctgagaactgaattccataggctgtgag 35
|||||||||||||||||||||||||||||||||
Sbjct: 19 tggctctgagaactgaattccataggctgtgag 51
>26476_tgu-mir-146b:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 3 tggctctgagaactgaattccataggc 29
|||||||||||||||||||||||||||
Sbjct: 5 tggctctgagaactgaattccataggc 31
>25497_pma-mir-146:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 tgagaactgaattccataggctgtga 34
||||||||||||||||||||||||||
Sbjct: 9 tgagaactgaattccataggctgtga 34
>25966_gga-mir-146b:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 tggctctgagaactgaattccataggc 29
||||| |||||||||||||||||||||
Sbjct: 13 tggctttgagaactgaattccataggc 39
>25796_xtr-mir-146b:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 ggctctgagaactgaattccat 25
||||||||||||||||||||||
Sbjct: 16 ggctctgagaactgaattccat 37
>25967_gga-mir-146c-1:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 gctctgagaactgaattccat 25
|||||||||||||||||||||
Sbjct: 30 gctctgagaactgaattccat 50
>25968_gga-mir-146c-2:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 gctctgagaactgaattccat 25
|||||||||||||||||||||
Sbjct: 30 gctctgagaactgaattccat 50
>26475_tgu-mir-146a:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 gctctgagaactgaattccat 25
|||||||||||||||||||||
Sbjct: 25 gctctgagaactgaattccat 45
>31879_mmu-mir-146a:mirbase
Length = 65
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 gctctgagaactgaattccat 25
|||||||||||||||||||||
Sbjct: 2 gctctgagaactgaattccat 22
>32752_rno-mir-146a:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 gctctgagaactgaattccat 25
|||||||||||||||||||||
Sbjct: 13 gctctgagaactgaattccat 33
>33232_bta-mir-146a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tgagaactgaattccataggctgtg 33
|||||||||||||||||||| ||||
Sbjct: 21 tgagaactgaattccataggttgtg 45
>25795_xtr-mir-146:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tgagaactgaattccatagg 28
||||||||||||||||||||
Sbjct: 18 tgagaactgaattccatagg 37
>34318_dre-mir-146a:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 8 ctgagaactgaattccatag 27
||||||||||||||||||||
Sbjct: 24 ctgagaactgaattccatag 43
