miRNEST 2.0, an integrative microRNA resource :: BLAST
>33235_bta-mir-148a:mirbase
Length = 68
Score = 135 bits (68), Expect = 4e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaac 60
Query: 61 tttgtctc 68
||||||||
Sbjct: 61 tttgtctc 68
>33998_ssc-mir-148a:mirbase
Length = 68
Score = 135 bits (68), Expect = 4e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaac 60
Query: 61 tttgtctc 68
||||||||
Sbjct: 61 tttgtctc 68
>27756_mml-mir-148a:mirbase
Length = 68
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaac 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
Query: 61 tttgtctc 68
||||||||
Sbjct: 61 tttgtctc 68
>28471_hsa-mir-148a:mirbase
Length = 68
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaac 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
Query: 61 tttgtctc 68
||||||||
Sbjct: 61 tttgtctc 68
>30855_ppy-mir-148a:mirbase
Length = 68
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaac 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
Query: 61 tttgtctc 68
||||||||
Sbjct: 61 tttgtctc 68
>30242_ptr-mir-148a:mirbase
Length = 67
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaac 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
Query: 61 tttgtct 67
|||||||
Sbjct: 61 tttgtct 67
>26723_cfa-mir-148a:mirbase
Length = 60
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 6 aaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaactttgt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaactttgt 60
>31882_mmu-mir-148a:mirbase
Length = 99
Score = 119 bits (60), Expect = 2e-28
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 5 caaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaactttg 64
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 22 caaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaactttg 81
Query: 65 tctc 68
||||
Sbjct: 82 tctc 85
>31506_oan-mir-148:mirbase
Length = 84
Score = 111 bits (56), Expect = 6e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaac 60
|||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 9 gaggcaaagttctgtgacactcagactctgattatgatagaagtcagtgcactacagaac 68
Query: 61 tttgtctc 68
||||||||
Sbjct: 69 tttgtctc 76
>27397_mdo-mir-148:mirbase
Length = 68
Score = 103 bits (52), Expect = 1e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaac 60
|||||||||||||| ||||||| |||||||| || |||||||||||||||||||||||||
Sbjct: 1 gaggcaaagttctgggacactcagactctgattaggatagaagtcagtgcactacagaac 60
Query: 61 tttgtctc 68
||||||||
Sbjct: 61 tttgtctc 68
>25797_xtr-mir-148a:mirbase
Length = 86
Score = 89.7 bits (45), Expect = 2e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 5 caaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaactttg 64
|||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 14 caaagttctgtgacacttagactctgaatatgatagcagtcagtgcactacagaactttg 73
Query: 65 t 65
|
Sbjct: 74 t 74
>26479_tgu-mir-148:mirbase
Length = 112
Score = 89.7 bits (45), Expect = 2e-19
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 4 gcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaacttt 63
||||||||||| ||||||||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 41 gcaaagttctgtgacactccgactctgggtacgatagcagtcagtgcactacagaacttt 100
Query: 64 gtctc 68
|||||
Sbjct: 101 gtctc 105
>26558_tgu-mir-2957:mirbase
Length = 74
Score = 89.7 bits (45), Expect = 2e-19
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 4 gcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaacttt 63
||||||||||| ||||||||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 68 gcaaagttctgtgacactccgactctgggtacgatagcagtcagtgcactacagaacttt 9
Query: 64 gtctc 68
|||||
Sbjct: 8 gtctc 4
>25971_gga-mir-148a:mirbase
Length = 68
Score = 81.8 bits (41), Expect = 5e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 4 gcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaacttt 63
||||||||||| ||||||| ||||||| || ||||| ||||||||||||||||||||||
Sbjct: 4 gcaaagttctgtgacactcagactctggttacgatagcagtcagtgcactacagaacttt 63
Query: 64 gtctc 68
|||||
Sbjct: 64 gtctc 68
>34321_dre-mir-148:mirbase
Length = 79
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/49 (87%), Gaps = 2/49 (4%)
Strand = Plus / Plus
Query: 17 acactccgactctgaatatgatagaagtcagtgcactacagaactttgt 65
||||||||||||||||| | | | |||||||||| |||||||||||||
Sbjct: 24 acactccgactctgaatgt--ttgcagtcagtgcattacagaactttgt 70
>25798_xtr-mir-148b:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 40 gaagtcagtgcactacagaactttgtctc 68
|||||||||||| |||||||||||||||
Sbjct: 56 gaagtcagtgcatcacagaactttgtctc 84
>27051_eca-mir-148b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtctc 68
||||||||||| |||||||||||||||
Sbjct: 49 aagtcagtgcatcacagaactttgtctc 76
>27052_eca-mir-148b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtctc 68
||||||||||| |||||||||||||||
Sbjct: 49 aagtcagtgcatcacagaactttgtctc 76
>27757_mml-mir-148b:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtctc 68
||||||||||| |||||||||||||||
Sbjct: 60 aagtcagtgcatcacagaactttgtctc 87
>28472_hsa-mir-148b:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtctc 68
||||||||||| |||||||||||||||
Sbjct: 60 aagtcagtgcatcacagaactttgtctc 87
>30243_ptr-mir-148b:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtctc 68
||||||||||| |||||||||||||||
Sbjct: 60 aagtcagtgcatcacagaactttgtctc 87
>30856_ppy-mir-148b:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtctc 68
||||||||||| |||||||||||||||
Sbjct: 60 aagtcagtgcatcacagaactttgtctc 87
>31883_mmu-mir-148b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtctc 68
||||||||||| |||||||||||||||
Sbjct: 58 aagtcagtgcatcacagaactttgtctc 85
>32755_rno-mir-148b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtctc 68
||||||||||| |||||||||||||||
Sbjct: 58 aagtcagtgcatcacagaactttgtctc 85
>32756_rno-mir-148b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtctc 68
||||||||||| |||||||||||||||
Sbjct: 58 aagtcagtgcatcacagaactttgtctc 85
>33236_bta-mir-148b:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtctc 68
||||||||||| |||||||||||||||
Sbjct: 51 aagtcagtgcatcacagaactttgtctc 78
>33999_ssc-mir-148b:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtctc 68
||||||||||| |||||||||||||||
Sbjct: 46 aagtcagtgcatcacagaactttgtctc 73
>34606_fru-mir-148:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 agtcagtgcactacagaactttgt 65
|||||||||| |||||||||||||
Sbjct: 47 agtcagtgcattacagaactttgt 70
>34753_tni-mir-148:mirbase
Length = 66
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 agtcagtgcactacagaactttgt 65
|||||||||| |||||||||||||
Sbjct: 41 agtcagtgcattacagaactttgt 64
