miRNEST 2.0, an integrative microRNA resource :: BLAST
>27052_eca-mir-148b:mirbase
Length = 83
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 60
Query: 61 cacagaactttgtctcgaaagct 83
|||||||||||||||||||||||
Sbjct: 61 cacagaactttgtctcgaaagct 83
>27757_mml-mir-148b:mirbase
Length = 99
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 71
Query: 61 cacagaactttgtctcgaaagct 83
|||||||||||||||||||||||
Sbjct: 72 cacagaactttgtctcgaaagct 94
>28472_hsa-mir-148b:mirbase
Length = 99
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 71
Query: 61 cacagaactttgtctcgaaagct 83
|||||||||||||||||||||||
Sbjct: 72 cacagaactttgtctcgaaagct 94
>30243_ptr-mir-148b:mirbase
Length = 98
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 71
Query: 61 cacagaactttgtctcgaaagct 83
|||||||||||||||||||||||
Sbjct: 72 cacagaactttgtctcgaaagct 94
>30856_ppy-mir-148b:mirbase
Length = 99
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 71
Query: 61 cacagaactttgtctcgaaagct 83
|||||||||||||||||||||||
Sbjct: 72 cacagaactttgtctcgaaagct 94
>33236_bta-mir-148b:mirbase
Length = 90
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 62
Query: 61 cacagaactttgtctcgaaagct 83
|||||||||||||||||||||||
Sbjct: 63 cacagaactttgtctcgaaagct 85
>33999_ssc-mir-148b:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 4 atttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcatcac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcatcac 60
Query: 64 agaactttgtctcgaaagct 83
||||||||||||||||||||
Sbjct: 61 agaactttgtctcgaaagct 80
>31883_mmu-mir-148b:mirbase
Length = 97
Score = 143 bits (72), Expect = 2e-35
Identities = 81/83 (97%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 1 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 12 agcatttgaggtgaagttctgttatacactcaggctgtgg--ctctgaaagtcagtgcat 69
Query: 61 cacagaactttgtctcgaaagct 83
|||||||||||||||||||||||
Sbjct: 70 cacagaactttgtctcgaaagct 92
>32755_rno-mir-148b:mirbase
Length = 97
Score = 143 bits (72), Expect = 2e-35
Identities = 81/83 (97%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 1 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 12 agcatttgaggtgaagttctgttatacactcaggctgtgg--ctctgaaagtcagtgcat 69
Query: 61 cacagaactttgtctcgaaagct 83
|||||||||||||||||||||||
Sbjct: 70 cacagaactttgtctcgaaagct 92
>32756_rno-mir-148b:mirbase
Length = 97
Score = 143 bits (72), Expect = 2e-35
Identities = 81/83 (97%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 1 agcatttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcat 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 12 agcatttgaggtgaagttctgttatacactcaggctgtgg--ctctgaaagtcagtgcat 69
Query: 61 cacagaactttgtctcgaaagct 83
|||||||||||||||||||||||
Sbjct: 70 cacagaactttgtctcgaaagct 92
>26724_cfa-mir-148b:mirbase
Length = 61
Score = 121 bits (61), Expect = 8e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 13 gaagttctgttatacactcaggctgtggctctctgaaagtcagtgcatcacagaactttg 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagttctgttatacactcaggctgtggctctctgaaagtcagtgcatcacagaactttg 60
Query: 73 t 73
|
Sbjct: 61 t 61
>25798_xtr-mir-148b:mirbase
Length = 97
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 5 tttgaggtgaagttctgttatacactcaggctgtggctctctgaaagtcagtgcatcaca 64
||||||||||||||||||||||||||| ||||||| | || ||||||||||||||||
Sbjct: 13 tttgaggtgaagttctgttatacactccggctgtgagtaagtggaagtcagtgcatcaca 72
Query: 65 gaactttgtctcga 78
||||||||||||||
Sbjct: 73 gaactttgtctcga 86
>34607_fru-mir-152:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 50 agtcagtgcatcacagaactttgtc 74
||||||||||| |||||||||||||
Sbjct: 43 agtcagtgcataacagaactttgtc 67
>34754_tni-mir-152:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 50 agtcagtgcatcacagaactttgtc 74
||||||||||| |||||||||||||
Sbjct: 57 agtcagtgcataacagaactttgtc 81
>27050_eca-mir-148a:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 aagtcagtgcatcacagaactttgtctc 76
||||||||||| |||||||||||||||
Sbjct: 41 aagtcagtgcactacagaactttgtctc 68
>27397_mdo-mir-148:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 aagtcagtgcatcacagaactttgtctc 76
||||||||||| |||||||||||||||
Sbjct: 41 aagtcagtgcactacagaactttgtctc 68
>27756_mml-mir-148a:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 aagtcagtgcatcacagaactttgtctc 76
||||||||||| |||||||||||||||
Sbjct: 41 aagtcagtgcactacagaactttgtctc 68
>28471_hsa-mir-148a:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 aagtcagtgcatcacagaactttgtctc 76
||||||||||| |||||||||||||||
Sbjct: 41 aagtcagtgcactacagaactttgtctc 68
>30855_ppy-mir-148a:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 aagtcagtgcatcacagaactttgtctc 76
||||||||||| |||||||||||||||
Sbjct: 41 aagtcagtgcactacagaactttgtctc 68
>31506_oan-mir-148:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 aagtcagtgcatcacagaactttgtctc 76
||||||||||| |||||||||||||||
Sbjct: 49 aagtcagtgcactacagaactttgtctc 76
>31882_mmu-mir-148a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 aagtcagtgcatcacagaactttgtctc 76
||||||||||| |||||||||||||||
Sbjct: 58 aagtcagtgcactacagaactttgtctc 85
>33235_bta-mir-148a:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 aagtcagtgcatcacagaactttgtctc 76
||||||||||| |||||||||||||||
Sbjct: 41 aagtcagtgcactacagaactttgtctc 68
>33998_ssc-mir-148a:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 aagtcagtgcatcacagaactttgtctc 76
||||||||||| |||||||||||||||
Sbjct: 41 aagtcagtgcactacagaactttgtctc 68
>34321_dre-mir-148:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 50 agtcagtgcatcacagaactttgt 73
||||||||||| ||||||||||||
Sbjct: 47 agtcagtgcattacagaactttgt 70
>34606_fru-mir-148:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 50 agtcagtgcatcacagaactttgt 73
||||||||||| ||||||||||||
Sbjct: 47 agtcagtgcattacagaactttgt 70
>34753_tni-mir-148:mirbase
Length = 66
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 50 agtcagtgcatcacagaactttgt 73
||||||||||| ||||||||||||
Sbjct: 41 agtcagtgcattacagaactttgt 64
>25971_gga-mir-148a:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 50 agtcagtgcatcacagaactttgtctc 76
|||||||||| |||||||||||||||
Sbjct: 42 agtcagtgcactacagaactttgtctc 68
>26479_tgu-mir-148:mirbase
Length = 112
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 50 agtcagtgcatcacagaactttgtctc 76
|||||||||| |||||||||||||||
Sbjct: 79 agtcagtgcactacagaactttgtctc 105
>26558_tgu-mir-2957:mirbase
Length = 74
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 50 agtcagtgcatcacagaactttgtctc 76
|||||||||| |||||||||||||||
Sbjct: 30 agtcagtgcactacagaactttgtctc 4
>30242_ptr-mir-148a:mirbase
Length = 67
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 49 aagtcagtgcatcacagaactttgtct 75
||||||||||| ||||||||||||||
Sbjct: 41 aagtcagtgcactacagaactttgtct 67
>34323_dre-mir-152:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 50 agtcagtgcatcacagaactttg 72
||||||||||| |||||||||||
Sbjct: 52 agtcagtgcatgacagaactttg 74
