miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>27758_mml-mir-149:mirbase
          Length = 89

 Score =  153 bits (77), Expect = 2e-38
 Identities = 86/89 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  gccggcgcccaggctctggctccgtgtcttcactcccgtgtgtgtccgaggagggaggga 60
          ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1  gccggcgcccaagctctggctccgtgtcttcactcccgtgtttgtccgaggagggaggga 60

                                       
Query: 61 gggacgggggctgtgctggggctgccgga 89
          |||||||||||||||||||||| ||||||
Sbjct: 61 gggacgggggctgtgctggggcagccgga 89




>34000_ssc-mir-149:mirbase
          Length = 76

 Score =  151 bits (76), Expect = 1e-37
 Identities = 76/76 (100%)
 Strand = Plus / Plus

                                                                      
Query: 7  gcccaggctctggctccgtgtcttcactcccgtgtgtgtccgaggagggagggagggacg 66
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gcccaggctctggctccgtgtcttcactcccgtgtgtgtccgaggagggagggagggacg 60

                          
Query: 67 ggggctgtgctggggc 82
          ||||||||||||||||
Sbjct: 61 ggggctgtgctggggc 76




>26725_cfa-mir-149:mirbase
          Length = 83

 Score =  133 bits (67), Expect = 2e-32
 Identities = 79/82 (96%), Gaps = 2/82 (2%)
 Strand = Plus / Plus

                                                                      
Query: 1  gccggcgcccaggctctggctccgtgtcttcactcccgtgtgtgtccgaggagggaggga 60
          |||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||
Sbjct: 1  gccggcgcccgggctctggctccgtgtcttcactcccgtgt--gtccgaggagggaggga 58

                                
Query: 61 gggacgggggctgtgctggggc 82
          ||||||||||||||||||||||
Sbjct: 59 gggacgggggctgtgctggggc 80




>28473_hsa-mir-149:mirbase
          Length = 89

 Score =  131 bits (66), Expect = 9e-32
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  gccggcgcccaggctctggctccgtgtcttcactcccgtgtgtgtccgaggagggaggga 60
          ||||||||||  ||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 1  gccggcgcccgagctctggctccgtgtcttcactcccgtgcttgtccgaggagggaggga 60

                                
Query: 61 gggacgggggctgtgctggggc 82
          ||||||||||||||||||||||
Sbjct: 61 gggacgggggctgtgctggggc 82




>30857_ppy-mir-149:mirbase
          Length = 85

 Score =  131 bits (66), Expect = 9e-32
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  gccggcgcccaggctctggctccgtgtcttcactcccgtgtgtgtccgaggagggaggga 60
          ||||||||||  ||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 1  gccggcgcccgagctctggctccgtgtcttcactcccgtgtttgtccaaggagggaggga 60

                                
Query: 61 gggacgggggctgtgctggggc 82
          ||||||||||||||||||||||
Sbjct: 61 gggacgggggctgtgctggggc 82




>30244_ptr-mir-149:mirbase
          Length = 81

 Score =  129 bits (65), Expect = 4e-31
 Identities = 77/81 (95%)
 Strand = Plus / Plus

                                                                      
Query: 2  ccggcgcccaggctctggctccgtgtcttcactcccgtgtgtgtccgaggagggagggag 61
          |||||||||  ||||||||||||||||||||||||||||  |||||||||||||||||||
Sbjct: 1  ccggcgcccgagctctggctccgtgtcttcactcccgtgcttgtccgaggagggagggag 60

                               
Query: 62 ggacgggggctgtgctggggc 82
          |||||||||||||||||||||
Sbjct: 61 ggacgggggctgtgctggggc 81




>31884_mmu-mir-149:mirbase
          Length = 66

 Score =  115 bits (58), Expect = 5e-27
 Identities = 64/66 (96%)
 Strand = Plus / Plus

                                                                      
Query: 12 ggctctggctccgtgtcttcactcccgtgtgtgtccgaggagggagggagggacgggggc 71
          |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1  ggctctggctccgtgtcttcactcccgtgtttgtccgaggagggagggagggacgggggc 60

                
Query: 72 tgtgct 77
           |||||
Sbjct: 61 ggtgct 66