miRNEST 2.0, an integrative microRNA resource :: BLAST
>25972_gga-mir-153:mirbase
Length = 87
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 71
Query: 61 atcattg 67
|||||||
Sbjct: 72 atcattg 78
>26729_cfa-mir-153:mirbase
Length = 80
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 71
Query: 61 atcattg 67
|||||||
Sbjct: 72 atcattg 78
>27402_mdo-mir-153-2:mirbase
Length = 87
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 71
Query: 61 atcattg 67
|||||||
Sbjct: 72 atcattg 78
>27764_mml-mir-153-2:mirbase
Length = 87
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 71
Query: 61 atcattg 67
|||||||
Sbjct: 72 atcattg 78
>28219_mne-mir-153-2:mirbase
Length = 87
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 71
Query: 61 atcattg 67
|||||||
Sbjct: 72 atcattg 78
>28311_ggo-mir-153:mirbase
Length = 87
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 71
Query: 61 atcattg 67
|||||||
Sbjct: 72 atcattg 78
>28480_hsa-mir-153-2:mirbase
Length = 87
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 71
Query: 61 atcattg 67
|||||||
Sbjct: 72 atcattg 78
>30248_ptr-mir-153:mirbase
Length = 86
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 71
Query: 61 atcattg 67
|||||||
Sbjct: 72 atcattg 78
>30862_ppy-mir-153-2:mirbase
Length = 87
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 71
Query: 61 atcattg 67
|||||||
Sbjct: 72 atcattg 78
>32760_rno-mir-153:mirbase
Length = 87
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 71
Query: 61 atcattg 67
|||||||
Sbjct: 72 atcattg 78
>33241_bta-mir-153-2:mirbase
Length = 87
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 71
Query: 61 atcattg 67
|||||||
Sbjct: 72 atcattg 78
>34004_ssc-mir-153:mirbase
Length = 87
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 71
Query: 61 atcattg 67
|||||||
Sbjct: 72 atcattg 78
>34608_fru-mir-153a:mirbase
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 63
Query: 61 atcattg 67
|||||||
Sbjct: 64 atcattg 70
>26480_tgu-mir-153-1:mirbase
Length = 72
Score = 131 bits (66), Expect = 6e-32
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 2 tgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtga 60
Query: 62 tcattg 67
||||||
Sbjct: 61 tcattg 66
>31889_mmu-mir-153:mirbase
Length = 69
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gtgtcatttttgtgacgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 62
Query: 61 atcattg 67
|||||||
Sbjct: 63 atcattg 69
>34324_dre-mir-153a:mirbase
Length = 81
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 9 gtgtcatttttgtgatgttgcagctagttatatgagcccagttgcatagtcacaaaagtg 68
Query: 61 atcattg 67
|||||||
Sbjct: 69 atcattg 75
>25801_xtr-mir-153-2:mirbase
Length = 86
Score = 117 bits (59), Expect = 1e-27
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgacgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 71
Query: 61 atcattg 67
|| ||||
Sbjct: 72 attattg 78
>34755_tni-mir-153a:mirbase
Length = 72
Score = 105 bits (53), Expect = 4e-24
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 7 tttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtgatcatt 66
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 11 tttttgtgatgttgcagctagtaatataagccaagttgcatagtcacaaaagtgatcatt 70
Query: 67 g 67
|
Sbjct: 71 g 71
>34326_dre-mir-153c:mirbase
Length = 151
Score = 77.8 bits (39), Expect = 8e-16
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
|||||||||||||||| |||||||||||| | || | |||||||||||||||||||| ||
Sbjct: 41 gtgtcatttttgtgat-ttgcagctagtagtctgggtccagttgcatagtcacaaaaatg 99
Query: 61 atcattg 67
|||||||
Sbjct: 100 atcattg 106
>26481_tgu-mir-153-2:mirbase
Length = 72
Score = 73.8 bits (37), Expect = 1e-14
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 3 gtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtgat 62
|||||||||||||| |||||||||||||| || |||||||||||||||||||||||||
Sbjct: 3 gtcatttttgtgat-ttgcagctagtaatctggctccagttgcatagtcacaaaagtgat 61
Query: 63 c 63
|
Sbjct: 62 c 62
>27763_mml-mir-153-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 2e-13
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
|||||||||||||||| | |||||||||| | | | |||||||||||||||||||||||
Sbjct: 14 gtgtcatttttgtgatct-gcagctagtattctcactccagttgcatagtcacaaaagtg 72
Query: 61 atcattg 67
|||||||
Sbjct: 73 atcattg 79
>28218_mne-mir-153-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 2e-13
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
|||||||||||||||| | |||||||||| | | | |||||||||||||||||||||||
Sbjct: 14 gtgtcatttttgtgatct-gcagctagtattctcactccagttgcatagtcacaaaagtg 72
Query: 61 atcattg 67
|||||||
Sbjct: 73 atcattg 79
>28479_hsa-mir-153-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 2e-13
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
|||||||||||||||| | |||||||||| | | | |||||||||||||||||||||||
Sbjct: 14 gtgtcatttttgtgatct-gcagctagtattctcactccagttgcatagtcacaaaagtg 72
Query: 61 atcattg 67
|||||||
Sbjct: 73 atcattg 79
>30861_ppy-mir-153:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 2e-13
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
|||||||||||||||| | |||||||||| | | | |||||||||||||||||||||||
Sbjct: 14 gtgtcatttttgtgatct-gcagctagtattctcactccagttgcatagtcacaaaagtg 72
Query: 61 atcattg 67
|||||||
Sbjct: 73 atcattg 79
>27057_eca-mir-153-2:mirbase
Length = 69
Score = 61.9 bits (31), Expect = 5e-11
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
|||||||||||||||| | |||||||||| | | |||||||||||||||||||||||
Sbjct: 4 gtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaagtg 62
Query: 61 atcattg 67
|||||||
Sbjct: 63 atcattg 69
>27401_mdo-mir-153-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 5e-11
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
|||||||||||||||| | |||||||||| | || ||||||||||||||||||||||
Sbjct: 14 gtgtcatttttgtgatct-gcagctagtattctggcttcagttgcatagtcacaaaagtg 72
Query: 61 atcattg 67
|||||||
Sbjct: 73 atcattg 79
>25503_pma-mir-153-3:mirbase
Length = 78
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 36 gcccagttgcatagtcacaaaagtgatcat 65
||||||||||||||||||||||||||||||
Sbjct: 43 gcccagttgcatagtcacaaaagtgatcat 72
>31508_oan-mir-153:mirbase
Length = 145
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 38 ccagttgcatagtcacaaaagtgatcattg 67
||||||||||||||||||||||||||||||
Sbjct: 92 ccagttgcatagtcacaaaagtgatcattg 121
>33240_bta-mir-153-1:mirbase
Length = 90
Score = 60.0 bits (30), Expect = 2e-10
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 3 gtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtgat 62
|||||||||||||| | |||||||||| | | | |||||||||||||||||||||||||
Sbjct: 16 gtcatttttgtgatct-gcagctagtattctcactccagttgcatagtcacaaaagtgat 74
Query: 63 ca 64
||
Sbjct: 75 ca 76
>25800_xtr-mir-153-1:mirbase
Length = 87
Score = 58.0 bits (29), Expect = 8e-10
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 2 tgtcatttttgtgatgttgcagctagtaatatgagcc-cagttgcatagtcacaaaagtg 60
||||||||||||||| |||||||| ||||| | | | ||||||||||||||||||||||
Sbjct: 13 tgtcatttttgtgat-ttgcagcttgtaattttggtctcagttgcatagtcacaaaagtg 71
Query: 61 atcat 65
|||||
Sbjct: 72 atcat 76
>25501_pma-mir-153-1:mirbase
Length = 76
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 agttgcatagtcacaaaagtgatcattg 67
||||||||||||||||||||||||||||
Sbjct: 45 agttgcatagtcacaaaagtgatcattg 72
>34609_fru-mir-153b:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 1e-08
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
|||||||||||||| | |||||||||||| | || |||||||||||||||||||| ||
Sbjct: 10 gtgtcatttttgtggt-ttgcagctagtactctggctccagttgcatagtcacaaaaatg 68
Query: 61 atcattg 67
| |||||
Sbjct: 69 agcattg 75
>34756_tni-mir-153b:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 1e-08
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
|||||||||||||| | |||||||||||| | || |||||||||||||||||||| ||
Sbjct: 10 gtgtcatttttgtggt-ttgcagctagtactctggctccagttgcatagtcacaaaaatg 68
Query: 61 atcattg 67
| |||||
Sbjct: 69 agcattg 75
>25502_pma-mir-153-2:mirbase
Length = 76
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 40 agttgcatagtcacaaaagtgatcat 65
||||||||||||||||||||||||||
Sbjct: 45 agttgcatagtcacaaaagtgatcat 70
>34325_dre-mir-153b:mirbase
Length = 148
Score = 50.1 bits (25), Expect = 2e-07
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaa 57
|||||||||||||| | |||||||||||| | || ||||||||||||||||||||
Sbjct: 41 gtgtcatttttgtggt-ttgcagctagtagtctggttccagttgcatagtcacaaaa 96
>34826_spu-mir-153:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 agttgcatagtcacaaaagtgat 62
|||||||||||||||||||||||
Sbjct: 59 agttgcatagtcacaaaagtgat 81
>38870_lgi-mir-153:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 42 ttgcatagtcacaaaagtgatc 63
||||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgatc 82
>38755_cte-mir-153:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 42 ttgcatagtcacaaaagtgatc 63
||||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgatc 82
>24838_cin-mir-153:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 agttgcatagtcacaaaagtgatcat 65
||||||||||| ||||||||||||||
Sbjct: 64 agttgcatagtaacaaaagtgatcat 89
>34882_sko-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 ttgcatagtcacaaaagtgat 62
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
>34974_isc-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 ttgcatagtcacaaaagtgat 62
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
>35014_dpu-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 ttgcatagtcacaaaagtgat 62
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
>38118_bma-mir-153:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 ttgcatagtcacaaaagtgat 62
|||||||||||||||||||||
Sbjct: 50 ttgcatagtcacaaaagtgat 70
