miRNEST 2.0, an integrative microRNA resource :: BLAST
>27763_mml-mir-153-1:mirbase
Length = 90
Score = 129 bits (65), Expect = 3e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatctgcagctagtattctcgctccagttgcatagtcacaaaag 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 11 ccagtgtcatttttgtgatctgcagctagtattctcactccagttgcatagtcacaaaag 70
Query: 61 tgatcattg 69
|||||||||
Sbjct: 71 tgatcattg 79
>28218_mne-mir-153-1:mirbase
Length = 90
Score = 129 bits (65), Expect = 3e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatctgcagctagtattctcgctccagttgcatagtcacaaaag 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 11 ccagtgtcatttttgtgatctgcagctagtattctcactccagttgcatagtcacaaaag 70
Query: 61 tgatcattg 69
|||||||||
Sbjct: 71 tgatcattg 79
>28479_hsa-mir-153-1:mirbase
Length = 90
Score = 129 bits (65), Expect = 3e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatctgcagctagtattctcgctccagttgcatagtcacaaaag 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 11 ccagtgtcatttttgtgatctgcagctagtattctcactccagttgcatagtcacaaaag 70
Query: 61 tgatcattg 69
|||||||||
Sbjct: 71 tgatcattg 79
>30861_ppy-mir-153:mirbase
Length = 90
Score = 129 bits (65), Expect = 3e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatctgcagctagtattctcgctccagttgcatagtcacaaaag 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 11 ccagtgtcatttttgtgatctgcagctagtattctcactccagttgcatagtcacaaaag 70
Query: 61 tgatcattg 69
|||||||||
Sbjct: 71 tgatcattg 79
>27401_mdo-mir-153-1:mirbase
Length = 90
Score = 121 bits (61), Expect = 6e-29
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatctgcagctagtattctcgctccagttgcatagtcacaaaag 60
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 11 ccagtgtcatttttgtgatctgcagctagtattctggcttcagttgcatagtcacaaaag 70
Query: 61 tgatcattg 69
|||||||||
Sbjct: 71 tgatcattg 79
>33240_bta-mir-153-1:mirbase
Length = 90
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatctgcagctagtattctcgctccagttgcatagtcacaaaag 60
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 11 ccagcgtcatttttgtgatctgcagctagtattctcactccagttgcatagtcacaaaag 70
Query: 61 tgatca 66
||||||
Sbjct: 71 tgatca 76
>31508_oan-mir-153:mirbase
Length = 145
Score = 107 bits (54), Expect = 1e-24
Identities = 67/70 (95%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatctgcagct-agtattctcgctccagttgcatagtcacaaaa 59
||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 52 ccagtgtcatttttgtgatctgcagcttagtactctggctccagttgcatagtcacaaaa 111
Query: 60 gtgatcattg 69
||||||||||
Sbjct: 112 gtgatcattg 121
>34326_dre-mir-153c:mirbase
Length = 151
Score = 97.6 bits (49), Expect = 9e-22
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatctgcagctagtattctcgctccagttgcatagtcacaaaag 60
||||||||||||||||||| ||||||||||| ||| | |||||||||||||||||||||
Sbjct: 38 ccagtgtcatttttgtgatttgcagctagtagtctgggtccagttgcatagtcacaaaaa 97
Query: 61 tgatcattg 69
|||||||||
Sbjct: 98 tgatcattg 106
>26481_tgu-mir-153-2:mirbase
Length = 72
Score = 95.6 bits (48), Expect = 4e-21
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 6 gtcatttttgtgatctgcagctagtattctcgctccagttgcatagtcacaaaagtgatc 65
|||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 3 gtcatttttgtgatttgcagctagtaatctggctccagttgcatagtcacaaaagtgatc 62
>34609_fru-mir-153b:mirbase
Length = 86
Score = 89.7 bits (45), Expect = 2e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatctgcagctagtattctcgctccagttgcatagtcacaaaag 60
||||||||||||||||| | ||||||||||| ||| |||||||||||||||||||||||
Sbjct: 7 ccagtgtcatttttgtggtttgcagctagtactctggctccagttgcatagtcacaaaaa 66
Query: 61 tgatcattg 69
||| |||||
Sbjct: 67 tgagcattg 75
>34756_tni-mir-153b:mirbase
Length = 86
Score = 89.7 bits (45), Expect = 2e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatctgcagctagtattctcgctccagttgcatagtcacaaaag 60
||||||||||||||||| | ||||||||||| ||| |||||||||||||||||||||||
Sbjct: 7 ccagtgtcatttttgtggtttgcagctagtactctggctccagttgcatagtcacaaaaa 66
Query: 61 tgatcattg 69
||| |||||
Sbjct: 67 tgagcattg 75
>34325_dre-mir-153b:mirbase
Length = 148
Score = 71.9 bits (36), Expect = 5e-14
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 4 gtgtcatttttgtgatctgcagctagtattctcgctccagttgcatagtcacaaaa 59
|||||||||||||| | ||||||||||| ||| | |||||||||||||||||||||
Sbjct: 41 gtgtcatttttgtggtttgcagctagtagtctggttccagttgcatagtcacaaaa 96
>25972_gga-mir-153:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 8e-13
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaa 59
||||||||||||||||||| | |||||||||| | | ||||||||||||||||||||
Sbjct: 9 ccagtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaa 68
Query: 60 gtgatcattg 69
||||||||||
Sbjct: 69 gtgatcattg 78
>26729_cfa-mir-153:mirbase
Length = 80
Score = 67.9 bits (34), Expect = 8e-13
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaa 59
||||||||||||||||||| | |||||||||| | | ||||||||||||||||||||
Sbjct: 9 ccagtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaa 68
Query: 60 gtgatcattg 69
||||||||||
Sbjct: 69 gtgatcattg 78
>27764_mml-mir-153-2:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 8e-13
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaa 59
||||||||||||||||||| | |||||||||| | | ||||||||||||||||||||
Sbjct: 9 ccagtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaa 68
Query: 60 gtgatcattg 69
||||||||||
Sbjct: 69 gtgatcattg 78
>28219_mne-mir-153-2:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 8e-13
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaa 59
||||||||||||||||||| | |||||||||| | | ||||||||||||||||||||
Sbjct: 9 ccagtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaa 68
Query: 60 gtgatcattg 69
||||||||||
Sbjct: 69 gtgatcattg 78
>28311_ggo-mir-153:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 8e-13
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaa 59
||||||||||||||||||| | |||||||||| | | ||||||||||||||||||||
Sbjct: 9 ccagtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaa 68
Query: 60 gtgatcattg 69
||||||||||
Sbjct: 69 gtgatcattg 78
>28480_hsa-mir-153-2:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 8e-13
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaa 59
||||||||||||||||||| | |||||||||| | | ||||||||||||||||||||
Sbjct: 9 ccagtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaa 68
Query: 60 gtgatcattg 69
||||||||||
Sbjct: 69 gtgatcattg 78
>30248_ptr-mir-153:mirbase
Length = 86
Score = 67.9 bits (34), Expect = 8e-13
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaa 59
||||||||||||||||||| | |||||||||| | | ||||||||||||||||||||
Sbjct: 9 ccagtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaa 68
Query: 60 gtgatcattg 69
||||||||||
Sbjct: 69 gtgatcattg 78
>30862_ppy-mir-153-2:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 8e-13
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaa 59
||||||||||||||||||| | |||||||||| | | ||||||||||||||||||||
Sbjct: 9 ccagtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaa 68
Query: 60 gtgatcattg 69
||||||||||
Sbjct: 69 gtgatcattg 78
>32760_rno-mir-153:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 8e-13
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaa 59
||||||||||||||||||| | |||||||||| | | ||||||||||||||||||||
Sbjct: 9 ccagtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaa 68
Query: 60 gtgatcattg 69
||||||||||
Sbjct: 69 gtgatcattg 78
>33241_bta-mir-153-2:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 8e-13
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaa 59
||||||||||||||||||| | |||||||||| | | ||||||||||||||||||||
Sbjct: 9 ccagtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaa 68
Query: 60 gtgatcattg 69
||||||||||
Sbjct: 69 gtgatcattg 78
>34004_ssc-mir-153:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 8e-13
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaa 59
||||||||||||||||||| | |||||||||| | | ||||||||||||||||||||
Sbjct: 9 ccagtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaa 68
Query: 60 gtgatcattg 69
||||||||||
Sbjct: 69 gtgatcattg 78
>34608_fru-mir-153a:mirbase
Length = 71
Score = 67.9 bits (34), Expect = 8e-13
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ccagtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaa 59
||||||||||||||||||| | |||||||||| | | ||||||||||||||||||||
Sbjct: 1 ccagtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaa 60
Query: 60 gtgatcattg 69
||||||||||
Sbjct: 61 gtgatcattg 70
>25503_pma-mir-153-3:mirbase
Length = 78
Score = 63.9 bits (32), Expect = 1e-11
Identities = 56/63 (88%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 7 tcatttttgtgatctgcagctagtattctcgct--ccagttgcatagtcacaaaagtgat 64
|||||||||||| |||||||| ||| ||||| |||||||||||||||||||||||||
Sbjct: 10 tcatttttgtgacctgcagcttgtaccctcgccgcccagttgcatagtcacaaaagtgat 69
Query: 65 cat 67
|||
Sbjct: 70 cat 72
>25800_xtr-mir-153-1:mirbase
Length = 87
Score = 63.9 bits (32), Expect = 1e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 5 tgtcatttttgtgatctgcagctagtattctcgctc-cagttgcatagtcacaaaagtga 63
||||||||||||||| ||||||| ||| | | | || |||||||||||||||||||||||
Sbjct: 13 tgtcatttttgtgatttgcagcttgtaattttggtctcagttgcatagtcacaaaagtga 72
Query: 64 tcat 67
||||
Sbjct: 73 tcat 76
>27056_eca-mir-153:mirbase
Length = 67
Score = 61.9 bits (31), Expect = 5e-11
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 4 gtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaagtg 62
|||||||||||||||| | |||||||||| | | |||||||||||||||||||||||
Sbjct: 1 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 60
Query: 63 atcattg 69
|||||||
Sbjct: 61 atcattg 67
>27402_mdo-mir-153-2:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 5e-11
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 4 gtgtcatttttgtgatct-gcagctagtattctcgctccagttgcatagtcacaaaagtg 62
|||||||||||||||| | |||||||||| | | |||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgatgttgcagctagtaatatgagcccagttgcatagtcacaaaagtg 71
Query: 63 atcattg 69
|||||||
Sbjct: 72 atcattg 78
>26480_tgu-mir-153-1:mirbase
Length = 72
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 40 ccagttgcatagtcacaaaagtgatcattg 69
||||||||||||||||||||||||||||||
Sbjct: 37 ccagttgcatagtcacaaaagtgatcattg 66
>31889_mmu-mir-153:mirbase
Length = 69
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 40 ccagttgcatagtcacaaaagtgatcattg 69
||||||||||||||||||||||||||||||
Sbjct: 40 ccagttgcatagtcacaaaagtgatcattg 69
>34324_dre-mir-153a:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 40 ccagttgcatagtcacaaaagtgatcattg 69
||||||||||||||||||||||||||||||
Sbjct: 46 ccagttgcatagtcacaaaagtgatcattg 75
>25501_pma-mir-153-1:mirbase
Length = 76
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 42 agttgcatagtcacaaaagtgatcattg 69
||||||||||||||||||||||||||||
Sbjct: 45 agttgcatagtcacaaaagtgatcattg 72
>34755_tni-mir-153a:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 42 agttgcatagtcacaaaagtgatcattg 69
||||||||||||||||||||||||||||
Sbjct: 44 agttgcatagtcacaaaagtgatcattg 71
>25502_pma-mir-153-2:mirbase
Length = 76
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 42 agttgcatagtcacaaaagtgatcat 67
||||||||||||||||||||||||||
Sbjct: 45 agttgcatagtcacaaaagtgatcat 70
>25801_xtr-mir-153-2:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 40 ccagttgcatagtcacaaaagtgatcattg 69
||||||||||||||||||||||||| ||||
Sbjct: 49 ccagttgcatagtcacaaaagtgattattg 78
>34826_spu-mir-153:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 agttgcatagtcacaaaagtgat 64
|||||||||||||||||||||||
Sbjct: 59 agttgcatagtcacaaaagtgat 81
>38870_lgi-mir-153:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 ttgcatagtcacaaaagtgatc 65
||||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgatc 82
>38755_cte-mir-153:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 ttgcatagtcacaaaagtgatc 65
||||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgatc 82
>24838_cin-mir-153:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 42 agttgcatagtcacaaaagtgatcat 67
||||||||||| ||||||||||||||
Sbjct: 64 agttgcatagtaacaaaagtgatcat 89
>34882_sko-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 44 ttgcatagtcacaaaagtgat 64
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
>34974_isc-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 44 ttgcatagtcacaaaagtgat 64
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
>35014_dpu-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 44 ttgcatagtcacaaaagtgat 64
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
>38118_bma-mir-153:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 44 ttgcatagtcacaaaagtgat 64
|||||||||||||||||||||
Sbjct: 50 ttgcatagtcacaaaagtgat 70
