miRNEST 2.0, an integrative microRNA resource :: BLAST
>27075_eca-mir-193a:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
Query: 61 agtcccagtcttcggcccccg 81
|||||||||||||||||||||
Sbjct: 61 agtcccagtcttcggcccccg 81
>27784_mml-mir-193a:mirbase
Length = 85
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 5 gggagctgagggctgggtctttgcgggcgagatgagggtgtcggatcaactggcctacaa 64
Query: 61 agtcccagtcttcggcccccg 81
|||||||||| ||||||||||
Sbjct: 65 agtcccagtcctcggcccccg 85
>27785_mml-mir-193a:mirbase
Length = 85
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 5 gggagctgagggctgggtctttgcgggcgagatgagggtgtcggatcaactggcctacaa 64
Query: 61 agtcccagtcttcggcccccg 81
|||||||||| ||||||||||
Sbjct: 65 agtcccagtcctcggcccccg 85
>34021_ssc-mir-193a:mirbase
Length = 80
Score = 131 bits (66), Expect = 8e-32
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3 gggagctgagggctgggtctttgcgggcgagatgagggtgttggttcaactggcctacaa 62
Query: 61 agtcccagtcttcggccc 78
|||||||||| |||||||
Sbjct: 63 agtcccagtcctcggccc 80
>34022_ssc-mir-193a:mirbase
Length = 80
Score = 131 bits (66), Expect = 8e-32
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3 gggagctgagggctgggtctttgcgggcgagatgagggtgttggttcaactggcctacaa 62
Query: 61 agtcccagtcttcggccc 78
|||||||||| |||||||
Sbjct: 63 agtcccagtcctcggccc 80
>28501_hsa-mir-193a:mirbase
Length = 88
Score = 129 bits (65), Expect = 3e-31
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 8 gggagctgagggctgggtctttgcgggcgagatgagggtgtcggatcaactggcctacaa 67
Query: 61 agtcccagtcttcggcccccg 81
||||||||| ||||||||||
Sbjct: 68 agtcccagttctcggcccccg 88
>28502_hsa-mir-193a:mirbase
Length = 88
Score = 129 bits (65), Expect = 3e-31
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 8 gggagctgagggctgggtctttgcgggcgagatgagggtgtcggatcaactggcctacaa 67
Query: 61 agtcccagtcttcggcccccg 81
||||||||| ||||||||||
Sbjct: 68 agtcccagttctcggcccccg 88
>30882_ppy-mir-193a:mirbase
Length = 88
Score = 129 bits (65), Expect = 3e-31
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||
Sbjct: 8 gggagctgagggctgggtctttgcgggcgagatgaaggtgtcggatcaactggcctacaa 67
Query: 61 agtcccagtcttcggcccccg 81
|||||||||| ||||||||||
Sbjct: 68 agtcccagtcctcggcccccg 88
>30883_ppy-mir-193a:mirbase
Length = 88
Score = 129 bits (65), Expect = 3e-31
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||
Sbjct: 8 gggagctgagggctgggtctttgcgggcgagatgaaggtgtcggatcaactggcctacaa 67
Query: 61 agtcccagtcttcggcccccg 81
|||||||||| ||||||||||
Sbjct: 68 agtcccagtcctcggcccccg 88
>30267_ptr-mir-193a:mirbase
Length = 87
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 8 gggagctgagggctgggtctttgcgggcgagatgagggtgtcggatcaactggcctacaa 67
Query: 61 agtcccagtcttcggccccc 80
||||||||| |||||||||
Sbjct: 68 agtcccagttctcggccccc 87
>32779_rno-mir-193:mirbase
Length = 86
Score = 127 bits (64), Expect = 1e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 7 gggagctgagagctgggtctttgcgggcaagatgagggtgtcagttcaactggcctacaa 66
Query: 61 agtcccagtcttcggc 76
|||||||||| |||||
Sbjct: 67 agtcccagtcctcggc 82
>33036_rno-mir-3549:mirbase
Length = 112
Score = 127 bits (64), Expect = 1e-30
Identities = 73/76 (96%)
Strand = Plus / Minus
Query: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 95 gggagctgagagctgggtctttgcgggcaagatgagggtgtcagttcaactggcctacaa 36
Query: 61 agtcccagtcttcggc 76
|||||||||| |||||
Sbjct: 35 agtcccagtcctcggc 20
>33261_bta-mir-193a:mirbase
Length = 81
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
|||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 2 gggagctgagagctgggtctttgcgggcgagatgaaggtgtcggttcaactggcctacaa 61
Query: 61 agtcccagtcttcggccccc 80
|||||||||| |||||||||
Sbjct: 62 agtcccagtcctcggccccc 81
>33262_bta-mir-193a:mirbase
Length = 81
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 1 gggagctgagggctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaa 60
|||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 2 gggagctgagagctgggtctttgcgggcgagatgaaggtgtcggttcaactggcctacaa 61
Query: 61 agtcccagtcttcggccccc 80
|||||||||| |||||||||
Sbjct: 62 agtcccagtcctcggccccc 81
>26748_cfa-mir-193a:mirbase
Length = 56
Score = 103 bits (52), Expect = 2e-23
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 14 tgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaaagtcccagt 69
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 tgggtctttgcgggcgagatgagggtgtcggttcaactggcctacaaagtcccagt 56
>27414_mdo-mir-193:mirbase
Length = 66
Score = 103 bits (52), Expect = 2e-23
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 14 tgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaaagtcccagt 69
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tgggtctttgtgggcgagatgagggtgtcagttcaactggcctacaaagtcccagt 62
>31910_mmu-mir-193:mirbase
Length = 66
Score = 101 bits (51), Expect = 7e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 12 gctgggtctttgcgggcgagatgagggtgtcagttcaactggcctacaaagtcccagtc 70
||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5 gctgggtctttgcgggcaagatgagagtgtcagttcaactggcctacaaagtcccagtc 63
>25982_gga-mir-193a:mirbase
Length = 77
Score = 75.8 bits (38), Expect = 4e-15
Identities = 63/69 (91%), Gaps = 3/69 (4%)
Strand = Plus / Plus
Query: 4 agctgagggctgggtctttgcgggcgagatgag-ggt--gtcagttcaactggcctacaa 60
||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||
Sbjct: 1 agctgagggctgggtctttgcgggcgagatgagaggttcgtgtcttcaactggcctacaa 60
Query: 61 agtcccagt 69
|||||||||
Sbjct: 61 agtcccagt 69
>26491_tgu-mir-193b:mirbase
Length = 69
Score = 60.0 bits (30), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 3/61 (4%)
Strand = Plus / Plus
Query: 12 gctgggtctttgcgggcgagatgag-ggtgtcag--ttcaactggcctacaaagtcccag 68
||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||||
Sbjct: 1 gctgggtctttgcgggcgagatgagaggttcctgtcttcaactggcctacaaagtcccag 60
Query: 69 t 69
|
Sbjct: 61 t 61
>34342_dre-mir-193a-2:mirbase
Length = 98
Score = 60.0 bits (30), Expect = 2e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 45 ttcaactggcctacaaagtcccagtcttcggccc 78
||||||||||||||||||||||||| ||||||||
Sbjct: 52 ttcaactggcctacaaagtcccagttttcggccc 85
>34343_dre-mir-193a-3:mirbase
Length = 98
Score = 60.0 bits (30), Expect = 2e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 45 ttcaactggcctacaaagtcccagtcttcggccc 78
||||||||||||||||||||||||| ||||||||
Sbjct: 52 ttcaactggcctacaaagtcccagttttcggccc 85
>34620_fru-mir-193:mirbase
Length = 88
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 gttcaactggcctacaaagtcccagtct 71
||||||||||||||||||||||||||||
Sbjct: 46 gttcaactggcctacaaagtcccagtct 73
>34767_tni-mir-193:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 gttcaactggcctacaaagtcccagt 69
||||||||||||||||||||||||||
Sbjct: 41 gttcaactggcctacaaagtcccagt 66
>34341_dre-mir-193a-1:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 46 tcaactggcctacaaagtcccagt 69
||||||||||||||||||||||||
Sbjct: 59 tcaactggcctacaaagtcccagt 82
>33263_bta-mir-193a-2:mirbase
Length = 53
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 48 aactggcctacaaagtcccag 68
|||||||||||||||||||||
Sbjct: 51 aactggcctacaaagtcccag 31
