miRNEST 2.0, an integrative microRNA resource :: BLAST
>28526_hsa-mir-208a:mirbase
Length = 71
Score = 141 bits (71), Expect = 9e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 7 tgacgggcgagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacgggcgagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaag 60
Query: 67 cttgttggtca 77
|||||||||||
Sbjct: 61 cttgttggtca 71
>33285_bta-mir-208a:mirbase
Length = 71
Score = 141 bits (71), Expect = 9e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 7 tgacgggcgagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacgggcgagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaag 60
Query: 67 cttgttggtca 77
|||||||||||
Sbjct: 61 cttgttggtca 71
>30285_ptr-mir-208a:mirbase
Length = 70
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 7 tgacgggcgagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacgggcgagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaag 60
Query: 67 cttgttggtc 76
||||||||||
Sbjct: 61 cttgttggtc 70
>27804_mml-mir-208a:mirbase
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 7 tgacgggcgagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaag 66
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacaggcgagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaag 60
Query: 67 cttgttggtca 77
|||||||||||
Sbjct: 61 cttgttggtca 71
>30903_ppy-mir-208a:mirbase
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 7 tgacgggcgagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaag 66
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacaggcgagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaag 60
Query: 67 cttgttggtca 77
|||||||||||
Sbjct: 61 cttgttggtca 71
>31934_mmu-mir-208a:mirbase
Length = 83
Score = 133 bits (67), Expect = 2e-32
Identities = 79/83 (95%)
Strand = Plus / Plus
Query: 1 ttcctgtgacgggcgagcttttggcccgggttatacctgatgctcacgtataagacgagc 60
||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ttcctttgacgggtgagcttttggcccgggttatacctgacactcacgtataagacgagc 60
Query: 61 aaaaagcttgttggtcagaggag 83
|||||||||||||||||||||||
Sbjct: 61 aaaaagcttgttggtcagaggag 83
>31935_mmu-mir-208a:mirbase
Length = 83
Score = 133 bits (67), Expect = 2e-32
Identities = 79/83 (95%)
Strand = Plus / Plus
Query: 1 ttcctgtgacgggcgagcttttggcccgggttatacctgatgctcacgtataagacgagc 60
||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ttcctttgacgggtgagcttttggcccgggttatacctgacactcacgtataagacgagc 60
Query: 61 aaaaagcttgttggtcagaggag 83
|||||||||||||||||||||||
Sbjct: 61 aaaaagcttgttggtcagaggag 83
>32798_rno-mir-208:mirbase
Length = 83
Score = 133 bits (67), Expect = 2e-32
Identities = 79/83 (95%)
Strand = Plus / Plus
Query: 1 ttcctgtgacgggcgagcttttggcccgggttatacctgatgctcacgtataagacgagc 60
||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ttcctttgacgggtgagcttttggcccgggttatacctgactctcacgtataagacgagc 60
Query: 61 aaaaagcttgttggtcagaggag 83
|||||||||||||||||||||||
Sbjct: 61 aaaaagcttgttggtcagaggag 83
>33033_rno-mir-3546:mirbase
Length = 116
Score = 133 bits (67), Expect = 2e-32
Identities = 79/83 (95%)
Strand = Plus / Minus
Query: 1 ttcctgtgacgggcgagcttttggcccgggttatacctgatgctcacgtataagacgagc 60
||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 99 ttcctttgacgggtgagcttttggcccgggttatacctgactctcacgtataagacgagc 40
Query: 61 aaaaagcttgttggtcagaggag 83
|||||||||||||||||||||||
Sbjct: 39 aaaaagcttgttggtcagaggag 17
>26768_cfa-mir-208a:mirbase
Length = 69
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 15 gagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaagcttgttgg 74
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 gagcttttggctcgggttatacctgatgctcacgtataagacgagcaaaaagcttgttgg 66
Query: 75 tca 77
|||
Sbjct: 67 tca 69
>31533_oan-mir-208:mirbase
Length = 111
Score = 93.7 bits (47), Expect = 2e-20
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 1 ttcctgtgacgggcgagcttttggcccgggttatacctgatgctcacgtataagacgagc 60
|||||||||| | | |||||||||||| | |||||||||| || ||||||||||||||
Sbjct: 20 ttcctgtgacagacaagcttttggcccagattatacctgacattcccgtataagacgagc 79
Query: 61 aaaaagcttgttggtcagaggag 83
|||||||||||||||||||||||
Sbjct: 80 aaaaagcttgttggtcagaggag 102
>27425_mdo-mir-208:mirbase
Length = 77
Score = 87.7 bits (44), Expect = 1e-18
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 1 ttcctgtgacgggcgagcttttggcccgggttatacctgatgctcacgtataagacgagc 60
|||||||||| || |||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 1 ttcctgtgacaggtgagcttttggtccgggttatacctgatgcatgtgtataagacgagc 60
Query: 61 aaaaagcttgttggtc 76
|||||||| |||||||
Sbjct: 61 aaaaagctcgttggtc 76
>25830_xtr-mir-208:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 48 gtataagacgagcaaaaagcttgtt 72
|||||||||||||| ||||||||||
Sbjct: 48 gtataagacgagcataaagcttgtt 72
