miRNEST 2.0, an integrative microRNA resource :: BLAST
>33293_bta-mir-216b:mirbase
Length = 82
Score = 163 bits (82), Expect = 2e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 4 gcagactggaaaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttaccc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagactggaaaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttaccc 60
Query: 64 gtagagattctacagtctgaca 85
||||||||||||||||||||||
Sbjct: 61 gtagagattctacagtctgaca 82
>27812_mml-mir-216b:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 4 gcagactggaaaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttaccc 63
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 gcagactggaaaatctctgcaggcaaatgtgatgtcactgaagaaatcacacacttaccc 60
Query: 64 gtagagattctacagtctgaca 85
||||||||||||||||||||||
Sbjct: 61 gtagagattctacagtctgaca 82
>30910_ppy-mir-216b:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 4 gcagactggaaaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttaccc 63
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 gcagactggaaaatctctgcaggcaaatgtgatgtcactgaagaaatcacacacttaccc 60
Query: 64 gtagagattctacagtctgaca 85
||||||||||||||||||||||
Sbjct: 61 gtagagattctacagtctgaca 82
>28534_hsa-mir-216b:mirbase
Length = 82
Score = 147 bits (74), Expect = 1e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 4 gcagactggaaaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttaccc 63
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1 gcagactggaaaatctctgcaggcaaatgtgatgtcactgaggaaatcacacacttaccc 60
Query: 64 gtagagattctacagtctgaca 85
||||||||||||||||||||||
Sbjct: 61 gtagagattctacagtctgaca 82
>30292_ptr-mir-216b:mirbase
Length = 81
Score = 145 bits (73), Expect = 6e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 4 gcagactggaaaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttaccc 63
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1 gcagactggaaaatctctgcaggcaaatgtgatgtcactgaggaaatcacacacttaccc 60
Query: 64 gtagagattctacagtctgac 84
|||||||||||||||||||||
Sbjct: 61 gtagagattctacagtctgac 81
>31944_mmu-mir-216b:mirbase
Length = 86
Score = 127 bits (64), Expect = 1e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 2 tggcagactggaaaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttac 61
||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 2 tggcagactgggaaatctctgcaggcaaatgtgatgtcactgaagaaaccacacacttac 61
Query: 62 ccgtagagattctacagtctgaca 85
| ||||||||||| ||||||||||
Sbjct: 62 ctgtagagattcttcagtctgaca 85
>32807_rno-mir-216b:mirbase
Length = 102
Score = 127 bits (64), Expect = 1e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 2 tggcagactggaaaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttac 61
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 8 tggcagactgggaaatctctgcaggcaaatgtgatgtcactgaagaaatcacacacttac 67
Query: 62 ccgtagagattctacagtctgaca 85
||||||||||| ||||||||||
Sbjct: 68 ttgtagagattcttcagtctgaca 91
>32808_rno-mir-216b:mirbase
Length = 102
Score = 127 bits (64), Expect = 1e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 2 tggcagactggaaaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttac 61
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 8 tggcagactgggaaatctctgcaggcaaatgtgatgtcactgaagaaatcacacacttac 67
Query: 62 ccgtagagattctacagtctgaca 85
||||||||||| ||||||||||
Sbjct: 68 ttgtagagattcttcagtctgaca 91
>26776_cfa-mir-216b:mirbase
Length = 62
Score = 121 bits (61), Expect = 8e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 14 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 60
Query: 74 t 74
|
Sbjct: 61 t 61
>27306_eca-mir-1461:mirbase
Length = 56
Score = 111 bits (56), Expect = 8e-26
Identities = 56/56 (100%)
Strand = Plus / Minus
Query: 16 atctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagat 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagat 1
>26004_gga-mir-216b:mirbase
Length = 89
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 5 cagactggaaaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccg 64
|||||||| |||||||||||||||||||||||||| || || |||| |||| ||||| |
Sbjct: 7 cagactgggaaatctctgcaggcaaatgtgatgtctttatagcaatctcacaattacctg 66
Query: 65 tagagattctacagtctg 82
||||||||||||| ||||
Sbjct: 67 tagagattctacaatctg 84
>26005_gga-mir-216c:mirbase
Length = 86
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 5 cagactggaaaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccg 64
|||||||| |||||||||||||||||||||||||| || || |||| |||| ||||| |
Sbjct: 81 cagactgggaaatctctgcaggcaaatgtgatgtctttatagcaatctcacaattacctg 22
Query: 65 tagagattctacagtctg 82
||||||||||||| ||||
Sbjct: 21 tagagattctacaatctg 4
>26512_tgu-mir-216b:mirbase
Length = 71
Score = 67.9 bits (34), Expect = 1e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 5 cagactggaaaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccg 64
|||||||| |||||||||||||||| ||||||||| || || |||| |||| ||||| |
Sbjct: 2 cagactgggaaatctctgcaggcaagtgtgatgtctttatagcaatctcacaattacctg 61
Query: 65 tagagattct 74
||||||||||
Sbjct: 62 tagagattct 71
>25334_csa-mir-216b:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 aatctctgcaggcaaatgtgatgtca 40
||||||||||||||| ||||||||||
Sbjct: 17 aatctctgcaggcaactgtgatgtca 42
>34371_dre-mir-216b-1:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 aatctctgcaggcaaatgtgatgt 38
||||||||||||||| ||||||||
Sbjct: 12 aatctctgcaggcaactgtgatgt 35
>34372_dre-mir-216b-2:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 aatctctgcaggcaaatgtgatgt 38
||||||||||||||| ||||||||
Sbjct: 11 aatctctgcaggcaactgtgatgt 34
>34638_fru-mir-216b:mirbase
Length = 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 15 aatctctgcaggcaaatgtgatg 37
||||||||||||||| |||||||
Sbjct: 10 aatctctgcaggcaactgtgatg 32
>34786_tni-mir-216b:mirbase
Length = 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 15 aatctctgcaggcaaatgtgatg 37
||||||||||||||| |||||||
Sbjct: 10 aatctctgcaggcaactgtgatg 32
