miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26778_cfa-mir-218-1:mirbase
Length = 64
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
Query: 61 ca 62
||
Sbjct: 61 ca 62
>31409_lca-mir-218:mirbase
Length = 110
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 84
Query: 61 ca 62
||
Sbjct: 85 ca 86
>33295_bta-mir-218-1:mirbase
Length = 110
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 84
Query: 61 ca 62
||
Sbjct: 85 ca 86
>27520_age-mir-218:mirbase
Length = 110
Score = 115 bits (58), Expect = 3e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtggttgcgaggtatgagtaaaacatggttccgtcaagcac 84
Query: 61 ca 62
||
Sbjct: 85 ca 86
>27584_lla-mir-218-1:mirbase
Length = 110
Score = 115 bits (58), Expect = 3e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtggttgcgaggtatgagtaaaacatggttccgtcaagcac 84
Query: 61 ca 62
||
Sbjct: 85 ca 86
>27626_sla-mir-218-1:mirbase
Length = 110
Score = 115 bits (58), Expect = 3e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtggttgcgaggtatgagtaaaacatggttccgtcaagcac 84
Query: 61 ca 62
||
Sbjct: 85 ca 86
>27814_mml-mir-218-1:mirbase
Length = 105
Score = 115 bits (58), Expect = 3e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 20 ttgtgcttgatctaaccatgtggttgcgaggtatgagtaaaacatggttccgtcaagcac 79
Query: 61 ca 62
||
Sbjct: 80 ca 81
>28238_mne-mir-218-1:mirbase
Length = 110
Score = 115 bits (58), Expect = 3e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtggttgcgaggtatgagtaaaacatggttccgtcaagcac 84
Query: 61 ca 62
||
Sbjct: 85 ca 86
>28334_ggo-mir-218:mirbase
Length = 110
Score = 115 bits (58), Expect = 3e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtggttgcgaggtatgagtaaaacatggttccgtcaagcac 84
Query: 61 ca 62
||
Sbjct: 85 ca 86
>28536_hsa-mir-218-1:mirbase
Length = 110
Score = 115 bits (58), Expect = 3e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtggttgcgaggtatgagtaaaacatggttccgtcaagcac 84
Query: 61 ca 62
||
Sbjct: 85 ca 86
>30121_ppa-mir-218-1:mirbase
Length = 110
Score = 115 bits (58), Expect = 3e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtggttgcgaggtatgagtaaaacatggttccgtcaagcac 84
Query: 61 ca 62
||
Sbjct: 85 ca 86
>30294_ptr-mir-218-1:mirbase
Length = 110
Score = 115 bits (58), Expect = 3e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtggttgcgaggtatgagtaaaacatggttccgtcaagcac 84
Query: 61 ca 62
||
Sbjct: 85 ca 86
>30912_ppy-mir-218-1:mirbase
Length = 110
Score = 115 bits (58), Expect = 3e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtggttgcgaggtatgagtaaaacatggttccgtcaagcac 84
Query: 61 ca 62
||
Sbjct: 85 ca 86
>34043_ssc-mir-218:mirbase
Length = 84
Score = 115 bits (58), Expect = 3e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttccgtcaagcac 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 11 ttgtgcttgatctaaccatgtggttgccaggtatgagtaaaacatggttctgtcaagcac 70
Query: 61 ca 62
||
Sbjct: 71 ca 72