miRNEST 2.0, an integrative microRNA resource :: BLAST
>28543_hsa-mir-222:mirbase
Length = 110
Score = 202 bits (102), Expect = 4e-53
Identities = 108/110 (98%)
Strand = Plus / Plus
Query: 1 gctgctggaaagtgtaggtaccctcaatggctcagtagccagtgtagatcctgtcttttg 60
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gctgctggaaggtgtaggtaccctcaatggctcagtagccagtgtagatcctgtctttcg 60
Query: 61 taatcagcagctacatctggctactgggtctctgatggcatcttctagct 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taatcagcagctacatctggctactgggtctctgatggcatcttctagct 110
>30917_ppy-mir-222:mirbase
Length = 110
Score = 202 bits (102), Expect = 4e-53
Identities = 108/110 (98%)
Strand = Plus / Plus
Query: 1 gctgctggaaagtgtaggtaccctcaatggctcagtagccagtgtagatcctgtcttttg 60
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gctgctggaaggtgtaggtaccctcaatggctcagtagccagtgtagatcctgtctttcg 60
Query: 61 taatcagcagctacatctggctactgggtctctgatggcatcttctagct 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taatcagcagctacatctggctactgggtctctgatggcatcttctagct 110
>33302_bta-mir-222:mirbase
Length = 110
Score = 196 bits (99), Expect = 2e-51
Identities = 105/107 (98%)
Strand = Plus / Plus
Query: 1 gctgctggaaagtgtaggtaccctcaatggctcagtagccagtgtagatcctgtcttttg 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgctggaatgtgtaggtaccctcaatggctcagtagccagtgtagatcctgtcttttg 60
Query: 61 taatcagcagctacatctggctactgggtctctgatggcatcttcta 107
||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taatcagtagctacatctggctactgggtctctgatggcatcttcta 107
>27820_mml-mir-222:mirbase
Length = 110
Score = 194 bits (98), Expect = 9e-51
Identities = 107/110 (97%)
Strand = Plus / Plus
Query: 1 gctgctggaaagtgtaggtaccctcaatggctcagtagccagtgtagatcctgtcttttg 60
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gctgctggaaggtataggtaccctcaatggctcagtagccagtgtagatcctgtctttcg 60
Query: 61 taatcagcagctacatctggctactgggtctctgatggcatcttctagct 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taatcagcagctacatctggctactgggtctctgatggcatcttctagct 110
>26783_cfa-mir-222:mirbase
Length = 90
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 21 ccctcaatggctcagtagccagtgtagatcctgtcttttgtaatcagcagctacatctgg 80
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 ccctcaatggctcagtagccagtgtagatcctgtcttttgtaatcagtagctacatctgg 60
Query: 81 ctactgggtctctgatggcatcttctagct 110
||||||||||||||||||||||||||||||
Sbjct: 61 ctactgggtctctgatggcatcttctagct 90
>27521_age-mir-222:mirbase
Length = 110
Score = 168 bits (85), Expect = 5e-43
Identities = 103/109 (94%)
Strand = Plus / Plus
Query: 2 ctgctggaaagtgtaggtaccctcaatggctcagtagccagtgtagatcctgtcttttgt 61
|||| |||| |||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2 ctgccggaaggtgtgggtaccctcagtggctcagtagccagtgtagatcctgtcttttgt 61
Query: 62 aatcagcagctacatctggctactgggtctctgatggcatcttctagct 110
|||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 62 aatcagtagctacatctggctactgggtctctgatggcatcttttagct 110
>32818_rno-mir-222:mirbase
Length = 103
Score = 155 bits (78), Expect = 8e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 21 ccctcaatggctcagtagccagtgtagatcctgtcttttgtaatcagcagctacatctgg 80
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 14 ccctcagtggctcagtagccagtgtagatcctgtctttggtaatcagcagctacatctgg 73
Query: 81 ctactgggtctctgatggcatcttctagct 110
|||||||||||||||||||||| |||||||
Sbjct: 74 ctactgggtctctgatggcatcatctagct 103
>34047_ssc-mir-222:mirbase
Length = 80
Score = 139 bits (70), Expect = 5e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 21 ccctcaatggctcagtagccagtgtagatcctgtcttttgtaatcagcagctacatctgg 80
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 3 ccctcaatggctcagtagccagtgtagatcctgtcatttgtaatcagtagctacatctgg 62
Query: 81 ctactgggtctctgatgg 98
||||||||||||||||||
Sbjct: 63 ctactgggtctctgatgg 80
>31952_mmu-mir-222:mirbase
Length = 79
Score = 133 bits (67), Expect = 3e-32
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 21 ccctcaatggctcagtagccagtgtagatcctgtcttttgtaatcagcagctacatctgg 80
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ccctcagtggctcagtagccagtgtagatcctgtctttggtaatcagcagctacatctgg 60
Query: 81 ctactgggtctctgatggc 99
|||||||||||||| ||||
Sbjct: 61 ctactgggtctctggtggc 79
>31542_oan-mir-222a:mirbase
Length = 110
Score = 101 bits (51), Expect = 1e-22
Identities = 81/90 (90%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 21 ccctcaatggctcagtagccagtgtagatcctgtcttttgtaatcagcagctacatctgg 80
|||||||| ||||||||| ||||||||||||||| || | |||||||||||||||||||
Sbjct: 18 ccctcaatcgctcagtagtcagtgtagatcctgtattct--aatcagcagctacatctgg 75
Query: 81 ctactgggtctctgatggcatcttctagct 110
||||||||||||||| || | |||||||||
Sbjct: 76 ctactgggtctctgagggtaccttctagct 105
>26011_gga-mir-222-1:mirbase
Length = 98
Score = 95.6 bits (48), Expect = 6e-21
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 24 tcaatggctcagtagccagtgtagatcctgtcttttgtaatcagcagctacatctggcta 83
||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 13 tcaatcgctcagtagtcagtgtagattctgtctttac-aatcagcagctacatctggcta 71
Query: 84 ctgggtctctgatggcatct 103
|||||||||||||| |||||
Sbjct: 72 ctgggtctctgatgacatct 91
>26012_gga-mir-222-2:mirbase
Length = 98
Score = 95.6 bits (48), Expect = 6e-21
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 24 tcaatggctcagtagccagtgtagatcctgtcttttgtaatcagcagctacatctggcta 83
||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 13 tcaatcgctcagtagtcagtgtagattctgtctttac-aatcagcagctacatctggcta 71
Query: 84 ctgggtctctgatggcatct 103
|||||||||||||| |||||
Sbjct: 72 ctgggtctctgatgacatct 91
>26518_tgu-mir-222-1:mirbase
Length = 74
Score = 89.7 bits (45), Expect = 4e-19
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 30 gctcagtagccagtgtagatcctgtcttttgtaatcagcagctacatctggctactgggt 89
||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 3 gctcagtagtcagtgtagattctgtctttac-aatcagcagctacatctggctactgggt 61
Query: 90 ctctgatggcatc 102
|||||||| ||||
Sbjct: 62 ctctgatgacatc 74
>26519_tgu-mir-222-2:mirbase
Length = 74
Score = 89.7 bits (45), Expect = 4e-19
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 30 gctcagtagccagtgtagatcctgtcttttgtaatcagcagctacatctggctactgggt 89
||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 3 gctcagtagtcagtgtagattctgtctttac-aatcagcagctacatctggctactgggt 61
Query: 90 ctctgatggcatc 102
|||||||| ||||
Sbjct: 62 ctctgatgacatc 74
>27435_mdo-mir-222a:mirbase
Length = 68
Score = 83.8 bits (42), Expect = 2e-17
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 63 atcagcagctacatctggctactgggtctctgatggcatctt 104
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 atcagcagctacatctggctactgggtctctgatggcatctt 62
>34382_dre-mir-222:mirbase
Length = 108
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/77 (89%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 30 gctcagtagccagtgtagatcctgtcttttgtaatcagcagctacatctggctactgggt 89
||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 31 gctcagtagtcagtgtagatcctgtgtcac--aatcagcagctacatctggctactgggt 88
Query: 90 ctctgatggcatcttct 106
|||||||||||| ||||
Sbjct: 89 ctctgatggcattttct 105
>34646_fru-mir-222:mirbase
Length = 69
Score = 75.8 bits (38), Expect = 6e-15
Identities = 59/65 (90%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 30 gctcagtagccagtgtagatcctgtcttttgtaatcagcagctacatctggctactgggt 89
||||||||| ||||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct: 7 gctcagtaggcagtgtagatcctgtgta--gcaatcagcagctacatctggctactgggt 64
Query: 90 ctctg 94
|||||
Sbjct: 65 ctctg 69
>34794_tni-mir-222:mirbase
Length = 68
Score = 75.8 bits (38), Expect = 6e-15
Identities = 59/65 (90%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 30 gctcagtagccagtgtagatcctgtcttttgtaatcagcagctacatctggctactgggt 89
||||||||| ||||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct: 6 gctcagtaggcagtgtagatcctgtgta--gcaatcagcagctacatctggctactgggt 63
Query: 90 ctctg 94
|||||
Sbjct: 64 ctctg 68
>25841_xtr-mir-222:mirbase
Length = 64
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 64 tcagcagctacatctggctactgggtctct 93
||||||||||||||||||||||||||||||
Sbjct: 34 tcagcagctacatctggctactgggtctct 63
>25535_pma-mir-222:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 39 ccagtgtagatcctgtcttttgtaatcagcagctacatctggctactgggtctctg 94
||||||||||||||| || || | |||||||||||| || ||||||||||||||
Sbjct: 26 ccagtgtagatcctgcctcgtgcacacagcagctacatttgactactgggtctctg 81
