miRNEST 2.0, an integrative microRNA resource :: BLAST
>28337_ggo-mir-223:mirbase
Length = 110
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 6 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 64
Query: 66 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 104
|||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 103
>28544_hsa-mir-223:mirbase
Length = 110
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 6 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 64
Query: 66 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 104
|||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 103
>30124_ppa-mir-223:mirbase
Length = 110
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 6 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 64
Query: 66 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 104
|||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 103
>30301_ptr-mir-223:mirbase
Length = 110
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 6 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 64
Query: 66 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 104
|||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 103
>27628_sla-mir-223:mirbase
Length = 110
Score = 180 bits (91), Expect = 1e-46
Identities = 97/99 (97%)
Strand = Plus / Plus
Query: 6 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 65
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccgtgtggta 64
Query: 66 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 104
||||||||||||||||||||||||||||||| |||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcgacacatgc 103
>27821_mml-mir-223:mirbase
Length = 110
Score = 180 bits (91), Expect = 1e-46
Identities = 97/99 (97%)
Strand = Plus / Plus
Query: 6 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 65
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccgtgtggta 64
Query: 66 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 104
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcggcatatgc 103
>30918_ppy-mir-223:mirbase
Length = 110
Score = 180 bits (91), Expect = 1e-46
Identities = 97/99 (97%)
Strand = Plus / Plus
Query: 6 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 65
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 5 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttagacactccgtgtggta 64
Query: 66 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 104
|||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 103
>26784_cfa-mir-223:mirbase
Length = 103
Score = 172 bits (87), Expect = 3e-44
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 6 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 65
||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 5 gcctcctgcagtgccacactccgtgtatttgacaagctgagttagacactccatgtggaa 64
Query: 66 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 104
|||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 103
>33303_bta-mir-223:mirbase
Length = 108
Score = 151 bits (76), Expect = 1e-37
Identities = 97/103 (94%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 2 cccagcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgt 61
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccagcctcctgcagtgccatgctccgtgtatttgacaagctgagttggacactccatgt 60
Query: 62 ggtagagtgtcagtttgtcaaataccccaagtgcggcacatgc 104
|| |||||||||||||||||||||||||||| |||| ||||
Sbjct: 61 agt--agtgtcagtttgtcaaataccccaagtgtggcatatgc 101
>31953_mmu-mir-223:mirbase
Length = 110
Score = 147 bits (74), Expect = 2e-36
Identities = 89/94 (94%)
Strand = Plus / Plus
Query: 11 ctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggtagagtg 70
|||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 10 ctgcagtgtcacgctccgtgtatttgacaagctgagttggacactctgtgtggtagagtg 69
Query: 71 tcagtttgtcaaataccccaagtgcggcacatgc 104
|||||||||||||||||||||||| ||| |||||
Sbjct: 70 tcagtttgtcaaataccccaagtgtggctcatgc 103
>27436_mdo-mir-223:mirbase
Length = 111
Score = 141 bits (71), Expect = 1e-34
Identities = 86/91 (94%)
Strand = Plus / Plus
Query: 9 tcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggtagag 68
|||| ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 12 tccttcagtgccacactccgtgtatttgacaagctgagttggacactccgtgtcgtagag 71
Query: 69 tgtcagtttgtcaaataccccaagtgcggca 99
|||||||||||||||||||||||||| ||||
Sbjct: 72 tgtcagtttgtcaaataccccaagtgaggca 102
>32819_rno-mir-223:mirbase
Length = 110
Score = 141 bits (71), Expect = 1e-34
Identities = 92/99 (92%)
Strand = Plus / Plus
Query: 6 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 65
|||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5 gccttctgcagtgttacgctccgtgtatttgacaagctgagttggacactctgtgtggta 64
Query: 66 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 104
||||||||||||||||||||||||||||| ||| |||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgtggctcatgc 103
>31544_oan-mir-223:mirbase
Length = 124
Score = 119 bits (60), Expect = 4e-28
Identities = 82/88 (93%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 13 gcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtgg-tagagtgt 71
|||||||| |||||||||||||||||||||||||||||||||||| ||||| | ||||||
Sbjct: 20 gcagtgccgcgctccgtgtatttgacaagctgagttggacactccgtgtggtttgagtgt 79
Query: 72 cagtttgtcaaataccccaagtgcggca 99
||||||||||||||||| ||||| ||||
Sbjct: 80 cagtttgtcaaataccctaagtgaggca 107
>26013_gga-mir-223:mirbase
Length = 100
Score = 99.6 bits (50), Expect = 4e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 27 cgtgtatttgacaagctgagttggacactccatgtggtagagtgtcagtttgtcaaatac 86
|||||||||||||||||||||| ||||||| | ||| ||||||||||||||||||||||
Sbjct: 17 cgtgtatttgacaagctgagtttgacactcagtctggcagagtgtcagtttgtcaaatac 76
Query: 87 cccaagtgcggcac 100
|||||||| |||||
Sbjct: 77 cccaagtgaggcac 90
>25842_xtr-mir-223:mirbase
Length = 86
Score = 89.7 bits (45), Expect = 4e-19
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 28 gtgtatttgacaagctgagttggacactccatgtggtagagtgtcagtttgtcaaatacc 87
|||||||||||||||||||| ||||||| ||| | |||||||||||||||||||||||
Sbjct: 14 gtgtatttgacaagctgagtccgacactcaatgagacagagtgtcagtttgtcaaatacc 73
Query: 88 ccaagtgcggcac 100
||||||| |||||
Sbjct: 74 ccaagtgaggcac 86
>25669_xla-mir-223:mirbase
Length = 86
Score = 81.8 bits (41), Expect = 9e-17
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 28 gtgtatttgacaagctgagttggacactccatgtggtagagtgtcagtttgtcaaatacc 87
|||||||||||||||||||| ||||||| || | |||||||||||||||||||||||
Sbjct: 14 gtgtatttgacaagctgagtccgacactcagtgagacagagtgtcagtttgtcaaatacc 73
Query: 88 ccaagtgcggcac 100
||||||| |||||
Sbjct: 74 ccaagtgaggcac 86
>26520_tgu-mir-223:mirbase
Length = 71
Score = 79.8 bits (40), Expect = 4e-16
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 28 gtgtatttgacaagctgagttggacactccatgtggtagagtgtcagtttgtcaaatacc 87
|||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||
Sbjct: 1 gtgtatttgacaagctgagtccgacactcagtgtgc-agagtgtcagtttgtcaaatacc 59
Query: 88 ccaagtgcggca 99
||||||| ||||
Sbjct: 60 ccaagtgaggca 71
>34795_tni-mir-223:mirbase
Length = 85
Score = 61.9 bits (31), Expect = 8e-11
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 28 gtgtatttgacaagctgagttggacactccatgtggtagagtgtcagtttgtcaaatacc 87
||||||||||||||||| ||| ||||||| | | ||||||||||||||||||||||
Sbjct: 16 gtgtatttgacaagctgtgtttgacactctgtatctgcgagtgtcagtttgtcaaatacc 75
Query: 88 ccaagtg 94
|||||||
Sbjct: 76 ccaagtg 82
>34647_fru-mir-223:mirbase
Length = 89
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 66 gagtgtcagtttgtcaaataccccaagtg 94
|||||||||||||||||||||||||||||
Sbjct: 45 gagtgtcagtttgtcaaataccccaagtg 73
>34384_dre-mir-223:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 68 gtgtcagtttgtcaaataccccaag 92
|||||||||||||||||||||||||
Sbjct: 70 gtgtcagtttgtcaaataccccaag 94
