miRNEST 2.0, an integrative microRNA resource :: BLAST
>26786_cfa-mir-299:mirbase
Length = 63
Score = 117 bits (59), Expect = 9e-28
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggacggtaaaccgctt 60
Query: 61 ctt 63
|||
Sbjct: 61 ctt 63
Score = 50.1 bits (25), Expect = 2e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
||||||||||||||||||||| | | |||||||||||| ||||||||
Sbjct: 56 ggtttaccgtcccacatacatactcaaaatgtatgtgggacggtaaacc 8
>28550_hsa-mir-299:mirbase
Length = 63
Score = 117 bits (59), Expect = 9e-28
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 aagaaatggtttaccgtcccacatacattttgaatatgtatgtgggatggtaaaccgctt 60
Query: 61 ctt 63
|||
Sbjct: 61 ctt 63
Score = 50.1 bits (25), Expect = 2e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
|||||||| |||||||||||| || | |||||||||||| ||||||||
Sbjct: 56 ggtttaccatcccacatacatattcaaaatgtatgtgggacggtaaacc 8
>28551_hsa-mir-299:mirbase
Length = 63
Score = 117 bits (59), Expect = 9e-28
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 aagaaatggtttaccgtcccacatacattttgaatatgtatgtgggatggtaaaccgctt 60
Query: 61 ctt 63
|||
Sbjct: 61 ctt 63
Score = 50.1 bits (25), Expect = 2e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
|||||||| |||||||||||| || | |||||||||||| ||||||||
Sbjct: 56 ggtttaccatcccacatacatattcaaaatgtatgtgggacggtaaacc 8
>31978_mmu-mir-299:mirbase
Length = 63
Score = 117 bits (59), Expect = 9e-28
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggacggtaaaccgctt 60
Query: 61 ctt 63
|||
Sbjct: 61 ctt 63
Score = 50.1 bits (25), Expect = 2e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
||||||||||||||||||||| | | |||||||||||| ||||||||
Sbjct: 56 ggtttaccgtcccacatacatactcaaaatgtatgtgggacggtaaacc 8
>32834_rno-mir-299:mirbase
Length = 63
Score = 117 bits (59), Expect = 9e-28
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggacggtaaaccgctt 60
Query: 61 ctt 63
|||
Sbjct: 61 ctt 63
Score = 50.1 bits (25), Expect = 2e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
||||||||||||||||||||| | | |||||||||||| ||||||||
Sbjct: 56 ggtttaccgtcccacatacatactcaaaatgtatgtgggacggtaaacc 8
>33056_rno-mir-3563:mirbase
Length = 118
Score = 117 bits (59), Expect = 9e-28
Identities = 62/63 (98%)
Strand = Plus / Minus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 89 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggacggtaaaccgctt 30
Query: 61 ctt 63
|||
Sbjct: 29 ctt 27
Score = 50.1 bits (25), Expect = 2e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
||||||||||||||||||||| | | |||||||||||| ||||||||
Sbjct: 34 ggtttaccgtcccacatacatactcaaaatgtatgtgggacggtaaacc 82
>33057_rno-mir-3563:mirbase
Length = 118
Score = 117 bits (59), Expect = 9e-28
Identities = 62/63 (98%)
Strand = Plus / Minus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 89 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggacggtaaaccgctt 30
Query: 61 ctt 63
|||
Sbjct: 29 ctt 27
Score = 50.1 bits (25), Expect = 2e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
||||||||||||||||||||| | | |||||||||||| ||||||||
Sbjct: 34 ggtttaccgtcccacatacatactcaaaatgtatgtgggacggtaaacc 82
>30306_ptr-mir-299:mirbase
Length = 69
Score = 109 bits (55), Expect = 2e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 1 aagaaatggtttaccgtcccacatacattttgaatatgtatgtgggacggtaaaccgctt 60
Query: 61 ctt 63
|||
Sbjct: 61 ctt 63
Score = 58.0 bits (29), Expect = 7e-10
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
||||||||||||||||||||| || | |||||||||||| ||||||||
Sbjct: 56 ggtttaccgtcccacatacatattcaaaatgtatgtgggacggtaaacc 8
>30924_ppy-mir-299:mirbase
Length = 63
Score = 109 bits (55), Expect = 2e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 1 aagaaatggtttaccgtcccacatacattttgaatatgtatgtgggacggtaaaccgctt 60
Query: 61 ctt 63
|||
Sbjct: 61 ctt 63
Score = 58.0 bits (29), Expect = 7e-10
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
||||||||||||||||||||| || | |||||||||||| ||||||||
Sbjct: 56 ggtttaccgtcccacatacatattcaaaatgtatgtgggacggtaaacc 8
>30925_ppy-mir-299:mirbase
Length = 63
Score = 109 bits (55), Expect = 2e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 1 aagaaatggtttaccgtcccacatacattttgaatatgtatgtgggacggtaaaccgctt 60
Query: 61 ctt 63
|||
Sbjct: 61 ctt 63
Score = 58.0 bits (29), Expect = 7e-10
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
||||||||||||||||||||| || | |||||||||||| ||||||||
Sbjct: 56 ggtttaccgtcccacatacatattcaaaatgtatgtgggacggtaaacc 8
>27827_mml-mir-299:mirbase
Length = 63
Score = 101 bits (51), Expect = 5e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||
Sbjct: 1 aagaaatggtttaccgtcccacatacattttcaatatgtatgtgggacggtaaaccgctt 60
Query: 61 ctt 63
|||
Sbjct: 61 ctt 63
Score = 65.9 bits (33), Expect = 3e-12
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
||||||||||||||||||||| |||| |||||||||||| ||||||||
Sbjct: 56 ggtttaccgtcccacatacatattgaaaatgtatgtgggacggtaaacc 8
>27828_mml-mir-299:mirbase
Length = 63
Score = 101 bits (51), Expect = 5e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||
Sbjct: 1 aagaaatggtttaccgtcccacatacattttcaatatgtatgtgggacggtaaaccgctt 60
Query: 61 ctt 63
|||
Sbjct: 61 ctt 63
Score = 65.9 bits (33), Expect = 3e-12
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
||||||||||||||||||||| |||| |||||||||||| ||||||||
Sbjct: 56 ggtttaccgtcccacatacatattgaaaatgtatgtgggacggtaaacc 8
>33307_bta-mir-299:mirbase
Length = 63
Score = 101 bits (51), Expect = 5e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||
Sbjct: 1 aagaaatggtttaccgtcccacatacattctgaatatgtatgtgggacggtaaaccgctt 60
Query: 61 ctt 63
|||
Sbjct: 61 ctt 63
Score = 65.9 bits (33), Expect = 3e-12
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
||||||||||||||||||||| || || |||||||||||| ||||||||
Sbjct: 56 ggtttaccgtcccacatacatattcagaatgtatgtgggacggtaaacc 8
>33803_oar-mir-299:mirbase
Length = 104
Score = 101 bits (51), Expect = 5e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||
Sbjct: 20 aagaaatggtttaccgtcccacatacattctgaatatgtatgtgggacggtaaaccgctt 79
Query: 61 ctt 63
|||
Sbjct: 80 ctt 82
Score = 65.9 bits (33), Expect = 3e-12
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
||||||||||||||||||||| || || |||||||||||| ||||||||
Sbjct: 75 ggtttaccgtcccacatacatattcagaatgtatgtgggacggtaaacc 27
>33804_oar-mir-299:mirbase
Length = 104
Score = 101 bits (51), Expect = 5e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||
Sbjct: 20 aagaaatggtttaccgtcccacatacattctgaatatgtatgtgggacggtaaaccgctt 79
Query: 61 ctt 63
|||
Sbjct: 80 ctt 82
Score = 65.9 bits (33), Expect = 3e-12
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
||||||||||||||||||||| || || |||||||||||| ||||||||
Sbjct: 75 ggtttaccgtcccacatacatattcagaatgtatgtgggacggtaaacc 27
>34050_ssc-mir-299:mirbase
Length = 79
Score = 101 bits (51), Expect = 5e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 aagaaatggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaaccgctt 60
|||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 10 aagaaatggtttaccgtcccacatacattttgcatatgtatgtgggacggtaaaccgctt 69
Query: 61 ctt 63
|||
Sbjct: 70 ctt 72
Score = 50.1 bits (25), Expect = 2e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 8 ggtttaccgtcccacatacattttgagtatgtatgtgggatggtaaacc 56
||||||||||||||||||||| | | |||||||||||| ||||||||
Sbjct: 65 ggtttaccgtcccacatacatatgcaaaatgtatgtgggacggtaaacc 17
