miRNEST 2.0, an integrative microRNA resource :: BLAST
>27114_eca-mir-301b:mirbase
Length = 97
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 cctcctgctggccgcaggtgctgtgacgatgttgcactactgtgctctgagaagcagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctcctgctggccgcaggtgctgtgacgatgttgcactactgtgctctgagaagcagtgc 60
Query: 61 aatgatattgtcaaagcatctgggactagccttgggg 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgatattgtcaaagcatctgggactagccttgggg 97
>33309_bta-mir-301b:mirbase
Length = 95
Score = 137 bits (69), Expect = 2e-33
Identities = 87/93 (93%)
Strand = Plus / Plus
Query: 3 tcctgctggccgcaggtgctgtgacgatgttgcactactgtgctctgagaagcagtgcaa 62
|||||||||||||||||||| |||||| |||||||||||||||| |||| ||||||||||
Sbjct: 1 tcctgctggccgcaggtgctctgacgaggttgcactactgtgctttgaggagcagtgcaa 60
Query: 63 tgatattgtcaaagcatctgggactagccttgg 95
|||||||||||||||||| ||||| ||||||||
Sbjct: 61 tgatattgtcaaagcatccgggaccagccttgg 93
>28554_hsa-mir-301b:mirbase
Length = 78
Score = 135 bits (68), Expect = 6e-33
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 11 gccgcaggtgctgtgacgatgttgcactactgtgctctgagaagcagtgcaatgatattg 70
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccgcaggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattg 60
Query: 71 tcaaagcatctgggac 86
||||||||||||||||
Sbjct: 61 tcaaagcatctgggac 76
>30927_ppy-mir-301b:mirbase
Length = 78
Score = 135 bits (68), Expect = 6e-33
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 11 gccgcaggtgctgtgacgatgttgcactactgtgctctgagaagcagtgcaatgatattg 70
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccgcaggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattg 60
Query: 71 tcaaagcatctgggac 86
||||||||||||||||
Sbjct: 61 tcaaagcatctgggac 76
>27830_mml-mir-301b:mirbase
Length = 77
Score = 133 bits (67), Expect = 3e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 12 ccgcaggtgctgtgacgatgttgcactactgtgctctgagaagcagtgcaatgatattgt 71
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcaggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgt 60
Query: 72 caaagcatctgggac 86
|||||||||||||||
Sbjct: 61 caaagcatctgggac 75
>30309_ptr-mir-301b:mirbase
Length = 77
Score = 133 bits (67), Expect = 3e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 12 ccgcaggtgctgtgacgatgttgcactactgtgctctgagaagcagtgcaatgatattgt 71
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcaggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgt 60
Query: 72 caaagcatctgggac 86
|||||||||||||||
Sbjct: 61 caaagcatctgggac 75
>26789_cfa-mir-301b:mirbase
Length = 76
Score = 119 bits (60), Expect = 4e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 15 caggtgctgtgacgatgttgcactactgtgctctgagaagcagtgcaatgatattgtcaa 74
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 caggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgtcaa 62
Query: 75 agcatctgggac 86
|||||| |||||
Sbjct: 63 agcatcggggac 74
>31981_mmu-mir-301b:mirbase
Length = 97
Score = 115 bits (58), Expect = 6e-27
Identities = 82/90 (91%)
Strand = Plus / Plus
Query: 3 tcctgctggccgcaggtgctgtgacgatgttgcactactgtgctctgagaagcagtgcaa 62
|||||||||| || |||||| |||| | |||||||||||||||| |||||||||||||||
Sbjct: 3 tcctgctggctgcgggtgctctgactaggttgcactactgtgctgtgagaagcagtgcaa 62
Query: 63 tgatattgtcaaagcatctgggactagcct 92
|| ||||||||||||||||||||| |||||
Sbjct: 63 tggtattgtcaaagcatctgggaccagcct 92
>32838_rno-mir-301b:mirbase
Length = 78
Score = 83.8 bits (42), Expect = 2e-17
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 17 ggtgctgtgacgatgttgcactactgtgctctgagaagcagtgcaatgatattgtcaaag 76
|||||| |||| | |||||||||||||||| || ||||||||||||| |||||||||||
Sbjct: 7 ggtgctctgactaggttgcactactgtgctgtggaaagcagtgcaatggtattgtcaaag 66
Query: 77 catctgggac 86
||||||||||
Sbjct: 67 catctgggac 76
>26014_gga-mir-301:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 aagcagtgcaatgatattgtcaaagcat 79
|||||||||||| |||||||||||||||
Sbjct: 54 aagcagtgcaataatattgtcaaagcat 81
>25844_xtr-mir-301-2:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 5e-06
Identities = 46/53 (86%), Gaps = 3/53 (5%)
Strand = Plus / Plus
Query: 30 tgttgcactactgtgctctga---gaagcagtgcaatgatattgtcaaagcat 79
||||||||||||||| ||| | ||||||||||||| ||||||||||||||
Sbjct: 16 tgttgcactactgtgatctcaaatgaagcagtgcaatagtattgtcaaagcat 68
>25843_xtr-mir-301-1:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatctg 82
||||||||||| |||||||||||||||||
Sbjct: 48 agcagtgcaatagtattgtcaaagcatctg 77
>26015_gga-mir-301b:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatctg 82
||||||||||| |||||||||||||||||
Sbjct: 52 agcagtgcaatagtattgtcaaagcatctg 81
>26016_gga-mir-301b:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatctg 82
||||||||||| |||||||||||||||||
Sbjct: 52 agcagtgcaatagtattgtcaaagcatctg 81
>26521_tgu-mir-301:mirbase
Length = 73
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatctg 82
||||||||||| |||||||||||||||||
Sbjct: 39 agcagtgcaatagtattgtcaaagcatctg 68
>26522_tgu-mir-301:mirbase
Length = 73
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatctg 82
||||||||||| |||||||||||||||||
Sbjct: 39 agcagtgcaatagtattgtcaaagcatctg 68
>26788_cfa-mir-301a:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatctg 82
||||||||||| |||||||||||||||||
Sbjct: 48 agcagtgcaatagtattgtcaaagcatctg 77
>27112_eca-mir-301a:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatctg 82
||||||||||| |||||||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagcatctg 78
>27437_mdo-mir-301:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatctg 82
||||||||||| |||||||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagcatctg 78
>27829_mml-mir-301a:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatctg 82
||||||||||| |||||||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagcatctg 78
>28553_hsa-mir-301a:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatctg 82
||||||||||| |||||||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagcatctg 78
>30308_ptr-mir-301a:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatctg 82
||||||||||| |||||||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagcatctg 78
>31545_oan-mir-301:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatctg 82
||||||||||| |||||||||||||||||
Sbjct: 71 agcagtgcaatagtattgtcaaagcatctg 100
>31857_mmu-mir-130b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 36/40 (90%), Gaps = 3/40 (7%)
Strand = Plus / Plus
Query: 30 tgttgcactactgtg---ctctgagaagcagtgcaatgat 66
||||||||||||||| ||||| ||||||||||||||||
Sbjct: 23 tgttgcactactgtgggcctctgggaagcagtgcaatgat 62
>32732_rno-mir-130b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 36/40 (90%), Gaps = 3/40 (7%)
Strand = Plus / Plus
Query: 30 tgttgcactactgtg---ctctgagaagcagtgcaatgat 66
||||||||||||||| ||||| ||||||||||||||||
Sbjct: 23 tgttgcactactgtgggcctctgggaagcagtgcaatgat 62
>33308_bta-mir-301a:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatctg 82
||||||||||| |||||||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagcatctg 78
>32837_rno-mir-301a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatctggga 85
||||||||||| ||||||||||||||| ||||
Sbjct: 59 agcagtgcaatagtattgtcaaagcatccggga 91
>34388_dre-mir-301c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tgctgtgacgatgttgcactactgt 43
|||| ||||||||||||||||||||
Sbjct: 11 tgctctgacgatgttgcactactgt 35
>31980_mmu-mir-301a:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 53 agcagtgcaatgatattgtcaaagcatc 80
||||||||||| |||||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagcatc 76
>34387_dre-mir-301b:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tgctgtgacgatgttgcactactg 42
|||| |||||||||||||||||||
Sbjct: 10 tgctttgacgatgttgcactactg 33
