miRNEST 2.0, an integrative microRNA resource :: BLAST
>26791_cfa-mir-302b:mirbase
Length = 75
Score = 109 bits (55), Expect = 3e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 6 ctttaactttaacatggacgtgctttctgtgacttgcaaaatagtaagtgcttccatgtt 65
|||||||||||||||||| || |||||| |||||| ||||||||||||||||||||||||
Sbjct: 5 ctttaactttaacatggaagtactttctttgactttcaaaatagtaagtgcttccatgtt 64
Query: 66 ttagtagaagt 76
|||||||||||
Sbjct: 65 ttagtagaagt 75
>33311_bta-mir-302b:mirbase
Length = 75
Score = 93.7 bits (47), Expect = 2e-20
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 6 ctttaactttaacatggacgtgctttctgtgacttgcaaaatagtaagtgcttccatgtt 65
||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||
Sbjct: 5 ctttaactttaacatggtagtactttctgtgacttttgaaatagtaagtgcttccatgtt 64
Query: 66 ttagtagaagt 76
|||||||||||
Sbjct: 65 ttagtagaagt 75
>27832_mml-mir-302b:mirbase
Length = 76
Score = 85.7 bits (43), Expect = 4e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 10 aactttaacatggacgtgctttctgtgacttgcaaaatagtaagtgcttccatgttttag 69
|||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 10 aactttaacatggaagtgctttctgtgactttaaaataagtaagtgcttccatgttttag 69
Query: 70 tag 72
|||
Sbjct: 70 tag 72
>30928_ppy-mir-302b:mirbase
Length = 76
Score = 85.7 bits (43), Expect = 4e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 10 aactttaacatggacgtgctttctgtgacttgcaaaatagtaagtgcttccatgttttag 69
|||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 10 aactttaacatggaagtgctttctgtgactttaaaagaagtaagtgcttccatgttttag 69
Query: 70 tag 72
|||
Sbjct: 70 tag 72
>28556_hsa-mir-302b:mirbase
Length = 73
Score = 73.8 bits (37), Expect = 2e-14
Identities = 57/63 (90%), Gaps = 3/63 (4%)
Strand = Plus / Plus
Query: 10 aactttaacatggacgtgctttctgtgacttgcaaaatagtaagtgcttccatgttttag 69
|||||||||||||| |||||||||||||||| || ||||||||||||||||||||||
Sbjct: 10 aactttaacatggaagtgctttctgtgactt---taaaagtaagtgcttccatgttttag 66
Query: 70 tag 72
|||
Sbjct: 67 tag 69
>30311_ptr-mir-302b:mirbase
Length = 72
Score = 73.8 bits (37), Expect = 2e-14
Identities = 57/63 (90%), Gaps = 3/63 (4%)
Strand = Plus / Plus
Query: 10 aactttaacatggacgtgctttctgtgacttgcaaaatagtaagtgcttccatgttttag 69
|||||||||||||| |||||||||||||||| || ||||||||||||||||||||||
Sbjct: 10 aactttaacatggaagtgctttctgtgactt---taaaagtaagtgcttccatgttttag 66
Query: 70 tag 72
|||
Sbjct: 67 tag 69
>31547_oan-mir-302-2:mirbase
Length = 69
Score = 73.8 bits (37), Expect = 2e-14
Identities = 57/63 (90%), Gaps = 3/63 (4%)
Strand = Plus / Plus
Query: 11 actttaacatggacgtgctttctgtgacttgcaaaatagtaagtgcttccatgttttagt 70
||||||||||||| ||||||||||||| || ||| |||||||||||||||||||||||
Sbjct: 6 actttaacatggaggtgctttctgtgattt---aaaaagtaagtgcttccatgttttagt 62
Query: 71 aga 73
|||
Sbjct: 63 aga 65
>26018_gga-mir-302b:mirbase
Length = 72
Score = 71.9 bits (36), Expect = 6e-14
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 6 ctttaactttaacatggacgtgctttctgtgacttgcaaaatagtaagtgcttccatgtt 65
|||| ||||||||||||| ||||||||||||| || ||| ||||||||||||||||||
Sbjct: 3 cttttactttaacatggaggtgctttctgtgattttacaaa-agtaagtgcttccatgtt 61
Query: 66 ttagtaga 73
||||||||
Sbjct: 62 ttagtaga 69
>31983_mmu-mir-302b:mirbase
Length = 74
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgttttagtagaagt 76
|||||||||||||||||||||||||||||
Sbjct: 46 agtaagtgcttccatgttttagtagaagt 74
>27118_eca-mir-302d:mirbase
Length = 68
Score = 48.1 bits (24), Expect = 9e-07
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 11 actttaacatggacgtgctttctgtgacttgcaaaatagtaagtgcttccatgttttagt 70
||||||||||||| | ||| |||||||||| ||| | |||||||||||||||||||||
Sbjct: 6 actttaacatggaggcacttgctgtgacttgagaaaaa-taagtgcttccatgttttagt 64
>27438_mdo-mir-302a:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 43 aaaatagtaagtgcttccatgttttagt 70
|||| |||||||||||||||||||||||
Sbjct: 38 aaaaaagtaagtgcttccatgttttagt 65
>33310_bta-mir-302a:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 43 aaaatagtaagtgcttccatgttttagt 70
|||| |||||||||||||||||||||||
Sbjct: 38 aaaaaagtaagtgcttccatgttttagt 65
>26020_gga-mir-302d:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgttttagt 70
|||||||||||||||||||||||
Sbjct: 42 agtaagtgcttccatgttttagt 64
>26790_cfa-mir-302a:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgttttagt 70
|||||||||||||||||||||||
Sbjct: 42 agtaagtgcttccatgttttagt 64
>27115_eca-mir-302a:mirbase
Length = 68
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgttttagt 70
|||||||||||||||||||||||
Sbjct: 42 agtaagtgcttccatgttttagt 64
>27441_mdo-mir-302d:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 3e-06
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 12 ctttaacatggacgtgctttctgtgacttgcaaaatagtaagtgcttccatgttt 66
|||||||||||| |||||| |||||| || |||| | |||||||||||||||||
Sbjct: 7 ctttaacatggaagtgcttgctgtga-ttttaaaaaattaagtgcttccatgttt 60
>31546_oan-mir-302-1:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgttttagt 70
|||||||||||||||||||||||
Sbjct: 76 agtaagtgcttccatgttttagt 98
>26793_cfa-mir-302d:mirbase
Length = 70
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 taagtgcttccatgttttagt 70
|||||||||||||||||||||
Sbjct: 44 taagtgcttccatgttttagt 64
>33313_bta-mir-302d:mirbase
Length = 70
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 taagtgcttccatgttttagt 70
|||||||||||||||||||||
Sbjct: 46 taagtgcttccatgttttagt 66
>26017_gga-mir-302a:mirbase
Length = 67
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 aagtgcttccatgttttagt 70
||||||||||||||||||||
Sbjct: 43 aagtgcttccatgttttagt 62
>27439_mdo-mir-302b:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 49 gtaagtgcttccatgttttagtag 72
||||||||||||||||||| ||||
Sbjct: 44 gtaagtgcttccatgttttggtag 67
>27831_mml-mir-302a:mirbase
Length = 69
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgtttt 67
||||||||||||||||||||
Sbjct: 42 agtaagtgcttccatgtttt 61
>28555_hsa-mir-302a:mirbase
Length = 69
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgtttt 67
||||||||||||||||||||
Sbjct: 42 agtaagtgcttccatgtttt 61
>30310_ptr-mir-302a:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgtttt 67
||||||||||||||||||||
Sbjct: 42 agtaagtgcttccatgtttt 61
>31982_mmu-mir-302a:mirbase
Length = 69
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgtttt 67
||||||||||||||||||||
Sbjct: 42 agtaagtgcttccatgtttt 61
>26019_gga-mir-302c:mirbase
Length = 65
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgttt 66
|||||||||||||||||||
Sbjct: 38 agtaagtgcttccatgttt 56
>26792_cfa-mir-302c:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgttt 66
|||||||||||||||||||
Sbjct: 41 agtaagtgcttccatgttt 59
>27117_eca-mir-302c:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgttt 66
|||||||||||||||||||
Sbjct: 41 agtaagtgcttccatgttt 59
>27440_mdo-mir-302c:mirbase
Length = 59
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgttt 66
|||||||||||||||||||
Sbjct: 35 agtaagtgcttccatgttt 53
>27833_mml-mir-302c:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgttt 66
|||||||||||||||||||
Sbjct: 41 agtaagtgcttccatgttt 59
>28557_hsa-mir-302c:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgttt 66
|||||||||||||||||||
Sbjct: 41 agtaagtgcttccatgttt 59
>30312_ptr-mir-302c:mirbase
Length = 67
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgttt 66
|||||||||||||||||||
Sbjct: 41 agtaagtgcttccatgttt 59
>30929_ppy-mir-302c:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgttt 66
|||||||||||||||||||
Sbjct: 41 agtaagtgcttccatgttt 59
>33312_bta-mir-302c:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgttt 66
|||||||||||||||||||
Sbjct: 41 agtaagtgcttccatgttt 59
