miRNEST 2.0, an integrative microRNA resource :: BLAST
>27136_eca-mir-342:mirbase
Length = 99
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 gaacctgggctcaaggtgaggggtgctatctgtgattgagggacatggcaaatagaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaacctgggctcaaggtgaggggtgctatctgtgattgagggacatggcaaatagaattg 60
Query: 61 tctcacacagaaatcgcacccgtcaccttggcccgccta 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctcacacagaaatcgcacccgtcaccttggcccgccta 99
>30337_ptr-mir-342:mirbase
Length = 98
Score = 161 bits (81), Expect = 1e-40
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 5 ctgggctcaaggtgaggggtgctatctgtgattgagggacatggcaaatagaattgtctc 64
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 4 ctgggctcaaggtgaggggtgctatctgtgattgagggacatggctaatggaattgtctc 63
Query: 65 acacagaaatcgcacccgtcaccttggcc 93
|||||||||||||||||||||||||||||
Sbjct: 64 acacagaaatcgcacccgtcaccttggcc 92
>27855_mml-mir-342:mirbase
Length = 99
Score = 153 bits (77), Expect = 3e-38
Identities = 86/89 (96%)
Strand = Plus / Plus
Query: 5 ctgggctcaaggtgaggggtgctatctgtgattgagggacatggcaaatagaattgtctc 64
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 5 ctgggctcaaggtgaggggtgctatctgtgattgagggacatggttaatggaattgtctc 64
Query: 65 acacagaaatcgcacccgtcaccttggcc 93
|||||||||||||||||||||||||||||
Sbjct: 65 acacagaaatcgcacccgtcaccttggcc 93
>27856_mml-mir-342:mirbase
Length = 99
Score = 153 bits (77), Expect = 3e-38
Identities = 86/89 (96%)
Strand = Plus / Plus
Query: 5 ctgggctcaaggtgaggggtgctatctgtgattgagggacatggcaaatagaattgtctc 64
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 5 ctgggctcaaggtgaggggtgctatctgtgattgagggacatggttaatggaattgtctc 64
Query: 65 acacagaaatcgcacccgtcaccttggcc 93
|||||||||||||||||||||||||||||
Sbjct: 65 acacagaaatcgcacccgtcaccttggcc 93
>28592_hsa-mir-342:mirbase
Length = 99
Score = 153 bits (77), Expect = 3e-38
Identities = 86/89 (96%)
Strand = Plus / Plus
Query: 5 ctgggctcaaggtgaggggtgctatctgtgattgagggacatggcaaatagaattgtctc 64
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 5 ctgggctcaaggtgaggggtgctatctgtgattgagggacatggttaatggaattgtctc 64
Query: 65 acacagaaatcgcacccgtcaccttggcc 93
|||||||||||||||||||||||||||||
Sbjct: 65 acacagaaatcgcacccgtcaccttggcc 93
>28593_hsa-mir-342:mirbase
Length = 99
Score = 153 bits (77), Expect = 3e-38
Identities = 86/89 (96%)
Strand = Plus / Plus
Query: 5 ctgggctcaaggtgaggggtgctatctgtgattgagggacatggcaaatagaattgtctc 64
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 5 ctgggctcaaggtgaggggtgctatctgtgattgagggacatggttaatggaattgtctc 64
Query: 65 acacagaaatcgcacccgtcaccttggcc 93
|||||||||||||||||||||||||||||
Sbjct: 65 acacagaaatcgcacccgtcaccttggcc 93
>30959_ppy-mir-342:mirbase
Length = 99
Score = 153 bits (77), Expect = 3e-38
Identities = 86/89 (96%)
Strand = Plus / Plus
Query: 5 ctgggctcaaggtgaggggtgctatctgtgattgagggacatggcaaatagaattgtctc 64
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 5 ctgggctcaaggtgaggggtgctatctgtgattgagggacatggttaatggaattgtctc 64
Query: 65 acacagaaatcgcacccgtcaccttggcc 93
|||||||||||||||||||||||||||||
Sbjct: 65 acacagaaatcgcacccgtcaccttggcc 93
>30960_ppy-mir-342:mirbase
Length = 99
Score = 153 bits (77), Expect = 3e-38
Identities = 86/89 (96%)
Strand = Plus / Plus
Query: 5 ctgggctcaaggtgaggggtgctatctgtgattgagggacatggcaaatagaattgtctc 64
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 5 ctgggctcaaggtgaggggtgctatctgtgattgagggacatggttaatggaattgtctc 64
Query: 65 acacagaaatcgcacccgtcaccttggcc 93
|||||||||||||||||||||||||||||
Sbjct: 65 acacagaaatcgcacccgtcaccttggcc 93
>32011_mmu-mir-342:mirbase
Length = 99
Score = 151 bits (76), Expect = 1e-37
Identities = 85/88 (96%)
Strand = Plus / Plus
Query: 6 tgggctcaaggtgaggggtgctatctgtgattgagggacatggcaaatagaattgtctca 65
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 6 tgggctcaaggtgaggggtgctatctgtgattgagggacatggtcaatggaattgtctca 65
Query: 66 cacagaaatcgcacccgtcaccttggcc 93
||||||||||||||||||||||||||||
Sbjct: 66 cacagaaatcgcacccgtcaccttggcc 93
>32012_mmu-mir-342:mirbase
Length = 99
Score = 151 bits (76), Expect = 1e-37
Identities = 85/88 (96%)
Strand = Plus / Plus
Query: 6 tgggctcaaggtgaggggtgctatctgtgattgagggacatggcaaatagaattgtctca 65
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 6 tgggctcaaggtgaggggtgctatctgtgattgagggacatggtcaatggaattgtctca 65
Query: 66 cacagaaatcgcacccgtcaccttggcc 93
||||||||||||||||||||||||||||
Sbjct: 66 cacagaaatcgcacccgtcaccttggcc 93
>32862_rno-mir-342:mirbase
Length = 99
Score = 151 bits (76), Expect = 1e-37
Identities = 85/88 (96%)
Strand = Plus / Plus
Query: 6 tgggctcaaggtgaggggtgctatctgtgattgagggacatggcaaatagaattgtctca 65
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 6 tgggctcaaggtgaggggtgctatctgtgattgagggacatggtcaatggaattgtctca 65
Query: 66 cacagaaatcgcacccgtcaccttggcc 93
||||||||||||||||||||||||||||
Sbjct: 66 cacagaaatcgcacccgtcaccttggcc 93
>32863_rno-mir-342:mirbase
Length = 99
Score = 151 bits (76), Expect = 1e-37
Identities = 85/88 (96%)
Strand = Plus / Plus
Query: 6 tgggctcaaggtgaggggtgctatctgtgattgagggacatggcaaatagaattgtctca 65
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 6 tgggctcaaggtgaggggtgctatctgtgattgagggacatggtcaatggaattgtctca 65
Query: 66 cacagaaatcgcacccgtcaccttggcc 93
||||||||||||||||||||||||||||
Sbjct: 66 cacagaaatcgcacccgtcaccttggcc 93
>26807_cfa-mir-342:mirbase
Length = 63
Score = 125 bits (63), Expect = 6e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 21 gggtgctatctgtgattgagggacatggcaaatagaattgtctcacacagaaatcgcacc 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggtgctatctgtgattgagggacatggcaaatagaattgtctcacacagaaatcgcacc 60
Query: 81 cgt 83
|||
Sbjct: 61 cgt 63
>34065_ssc-mir-342:mirbase
Length = 80
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 21 gggtgctatctgtgattgagggacatggcaaatagaattgtctcacacagaaatcgcacc 80
||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 8 gggtgctatctgtgactgagggacatggcgcatagaactgtctcacacagaaatcgcacc 67
Query: 81 cgtcaccttggcc 93
|||||||||||||
Sbjct: 68 cgtcaccttggcc 80
>33330_bta-mir-342:mirbase
Length = 94
Score = 73.8 bits (37), Expect = 2e-14
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 18 gaggggtgctatctgtgattgagggacatggcaaatagaattgtctcacacagaaatcgc 77
||||||||||||||||| |||||| ||| ||||||| || |||||||||||||||||||
Sbjct: 19 gaggggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgc 77
Query: 78 acccgtcaccttggccc 94
|||| || ||| |||||
Sbjct: 78 acccatctcctcggccc 94
