miRNEST 2.0, an integrative microRNA resource :: BLAST
>27138_eca-mir-345:mirbase
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 acccaaccccaggtctgctgactcctagtccagtgctcgtgatggctagtgggccctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acccaaccccaggtctgctgactcctagtccagtgctcgtgatggctagtgggccctgaa 60
Query: 61 ctaggggtctggaggcctgggtttgaatatcgccag 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctaggggtctggaggcctgggtttgaatatcgccag 96
>33331_bta-mir-345:mirbase
Length = 91
Score = 157 bits (79), Expect = 2e-39
Identities = 88/91 (96%)
Strand = Plus / Plus
Query: 1 acccaaccccaggtctgctgactcctagtccagtgctcgtgatggctagtgggccctgaa 60
|||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 1 acccaaacccaggtctgctgactcctagtccagtgcttgtgatggctggtgggccctgaa 60
Query: 61 ctaggggtctggaggcctgggtttgaatatc 91
|||||||||||||||||||||||||||||||
Sbjct: 61 ctaggggtctggaggcctgggtttgaatatc 91
>33332_bta-mir-345:mirbase
Length = 91
Score = 157 bits (79), Expect = 2e-39
Identities = 88/91 (96%)
Strand = Plus / Plus
Query: 1 acccaaccccaggtctgctgactcctagtccagtgctcgtgatggctagtgggccctgaa 60
|||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 1 acccaaacccaggtctgctgactcctagtccagtgcttgtgatggctggtgggccctgaa 60
Query: 61 ctaggggtctggaggcctgggtttgaatatc 91
|||||||||||||||||||||||||||||||
Sbjct: 61 ctaggggtctggaggcctgggtttgaatatc 91
>30961_ppy-mir-345:mirbase
Length = 98
Score = 151 bits (76), Expect = 1e-37
Identities = 88/92 (95%)
Strand = Plus / Plus
Query: 5 aaccccaggtctgctgactcctagtccagtgctcgtgatggctagtgggccctgaactag 64
||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||
Sbjct: 6 aaccctaggtctgctgactcctagtccagggctcgtgatggctggtgggccctgaacgag 65
Query: 65 gggtctggaggcctgggtttgaatatcgccag 96
||||||||||||||||||||||||||||||||
Sbjct: 66 gggtctggaggcctgggtttgaatatcgccag 97
>28594_hsa-mir-345:mirbase
Length = 98
Score = 143 bits (72), Expect = 3e-35
Identities = 84/88 (95%)
Strand = Plus / Plus
Query: 5 aaccccaggtctgctgactcctagtccagtgctcgtgatggctagtgggccctgaactag 64
||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||
Sbjct: 6 aaccctaggtctgctgactcctagtccagggctcgtgatggctggtgggccctgaacgag 65
Query: 65 gggtctggaggcctgggtttgaatatcg 92
||||||||||||||||||||||||||||
Sbjct: 66 gggtctggaggcctgggtttgaatatcg 93
>30338_ptr-mir-345:mirbase
Length = 97
Score = 143 bits (72), Expect = 3e-35
Identities = 84/88 (95%)
Strand = Plus / Plus
Query: 5 aaccccaggtctgctgactcctagtccagtgctcgtgatggctagtgggccctgaactag 64
||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||
Sbjct: 5 aaccctaggtctgctgactcctagtccagggctcgtgatggctggtgggccctgaacgag 64
Query: 65 gggtctggaggcctgggtttgaatatcg 92
||||||||||||||||||||||||||||
Sbjct: 65 gggtctggaggcctgggtttgaatatcg 92
>34066_ssc-mir-345:mirbase
Length = 80
Score = 139 bits (70), Expect = 4e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 8 cccaggtctgctgactcctagtccagtgctcgtgatggctagtgggccctgaactagggg 67
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 3 cccaggtctgctgactcctagtccagtgcttgtgatggctggtgggccctgaactagggg 62
Query: 68 tctggaggcctgggtttg 85
||||||||||||||||||
Sbjct: 63 tctggaggcctgggtttg 80
>34067_ssc-mir-345:mirbase
Length = 80
Score = 139 bits (70), Expect = 4e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 8 cccaggtctgctgactcctagtccagtgctcgtgatggctagtgggccctgaactagggg 67
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 3 cccaggtctgctgactcctagtccagtgcttgtgatggctggtgggccctgaactagggg 62
Query: 68 tctggaggcctgggtttg 85
||||||||||||||||||
Sbjct: 63 tctggaggcctgggtttg 80
>27857_mml-mir-345:mirbase
Length = 88
Score = 109 bits (55), Expect = 4e-25
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 5 aaccccaggtctgctgactcctagtccagtgctcgtgatggctagtgggccctgaactag 64
||||| ||||| |||||||||||||| || ||||||| ||||| ||||||||||||| ||
Sbjct: 2 aaccctaggtcggctgactcctagtcaagggctcgtggtggctggtgggccctgaacgag 61
Query: 65 gggtctggaggcctgggtttgaatatc 91
|| ||||||||||||||||||||||||
Sbjct: 62 ggttctggaggcctgggtttgaatatc 88
>32026_mmu-mir-345:mirbase
Length = 96
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 9 ccaggtctgctgactcctagtccagtgctcgtgatggctagtgggccctgaactaggggt 68
||||| |||||||| |||||||||||||| ||| |||||| |||||||||||||||||||
Sbjct: 9 ccaggcctgctgacccctagtccagtgcttgtggtggctactgggccctgaactaggggt 68
Query: 69 ctggaggcctgggtttga 86
|||||| |||||||||||
Sbjct: 69 ctggagacctgggtttga 86
>32027_mmu-mir-345:mirbase
Length = 96
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 9 ccaggtctgctgactcctagtccagtgctcgtgatggctagtgggccctgaactaggggt 68
||||| |||||||| |||||||||||||| ||| |||||| |||||||||||||||||||
Sbjct: 9 ccaggcctgctgacccctagtccagtgcttgtggtggctactgggccctgaactaggggt 68
Query: 69 ctggaggcctgggtttga 86
|||||| |||||||||||
Sbjct: 69 ctggagacctgggtttga 86
>32872_rno-mir-345:mirbase
Length = 96
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 9 ccaggtctgctgactcctagtccagtgctcgtgatggctagtgggccctgaactaggggt 68
||||| |||||||| |||||||||||||| ||| |||||| |||||||||||||||||||
Sbjct: 9 ccaggcctgctgacccctagtccagtgcttgtggtggctactgggccctgaactaggggt 68
Query: 69 ctggaggcctgggtttga 86
|||||| |||||||||||
Sbjct: 69 ctggagacctgggtttga 86
>32873_rno-mir-345:mirbase
Length = 96
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 9 ccaggtctgctgactcctagtccagtgctcgtgatggctagtgggccctgaactaggggt 68
||||| |||||||| |||||||||||||| ||| |||||| |||||||||||||||||||
Sbjct: 9 ccaggcctgctgacccctagtccagtgcttgtggtggctactgggccctgaactaggggt 68
Query: 69 ctggaggcctgggtttga 86
|||||| |||||||||||
Sbjct: 69 ctggagacctgggtttga 86
>26808_cfa-mir-345:mirbase
Length = 60
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 16 tgctgactcctagtccagtgctcgtgatggctagtgggccctgaactaggggtctggagg 75
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 tgctgactcttagtccagtgctcgtgatggctggtgggccctgaactaggggtctggagg 60
>28631_hsa-mir-378i:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 ctgactcctagtccagtgctc 38
|||||||||||||||||||||
Sbjct: 23 ctgactcctagtccagtgctc 3
