miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41101_tcc-MIR168:mirbase
          Length = 167

 Score =  331 bits (167), Expect = 1e-91
 Identities = 167/167 (100%)
 Strand = Plus / Plus

                                                                       
Query: 6   agttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggctgctgctcct 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggctgctgctcct 60

                                                                       
Query: 66  taatagtggattggattggatttaggccagatggcgggccgtgactggaggaggcacgaa 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  taatagtggattggattggatttaggccagatggcgggccgtgactggaggaggcacgaa 120

                                                          
Query: 126 ttggatcccgccttgcatcaactgaatcggagaccgcggtgaggggt 172
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttggatcccgccttgcatcaactgaatcggagaccgcggtgaggggt 167




>41215_crt-MIR168:mirbase
          Length = 201

 Score =  101 bits (51), Expect = 2e-22
 Identities = 51/51 (100%)
 Strand = Plus / Plus

                                                             
Query: 6  agttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggct 56
          |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  agttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggct 51



 Score = 85.7 bits (43), Expect = 1e-17
 Identities = 46/47 (97%)
 Strand = Plus / Plus

                                                          
Query: 122 cgaattggatcccgccttgcatcaactgaatcggagaccgcggtgag 168
           |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 133 cgaattggatcccgccttgcatcaactgaatcggagaccgaggtgag 179




>41210_ccl-MIR168:mirbase
          Length = 176

 Score = 99.6 bits (50), Expect = 7e-22
 Identities = 50/50 (100%)
 Strand = Plus / Plus

                                                            
Query: 7  gttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggct 56
          ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggct 50



 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 44/45 (97%)
 Strand = Plus / Plus

                                                        
Query: 122 cgaattggatcccgccttgcatcaactgaatcggagaccgcggtg 166
           |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 132 cgaattggatcccgccttgcatcaactgaatcggagaccgaggtg 176




>40448_gma-MIR168:mirbase
          Length = 125

 Score = 83.8 bits (42), Expect = 4e-17
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                         
Query: 122 cgaattggatcccgccttgcatcaactgaatcggagaccgcggtga 167
           |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 78  cgaattggatcccgccttgcatcaactgaatcggaggccgcggtga 123



 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||||||||||||||
Sbjct: 7  gcggtctctaattcgcttggtgcaggtcgggaac 40




>40044_ath-MIR168b:mirbase
          Length = 124

 Score = 83.8 bits (42), Expect = 4e-17
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                            
Query: 8  ttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggctg 57
          ||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 1  ttaccggcggtctcggattcgcttggtgcaggtcgggaactgattggctg 50



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 131 tcccgccttgcatcaactgaatcggagaccgcggtga 167
           ||||| |||| |||||||||||||||| ||| |||||
Sbjct: 88  tcccgtcttgtatcaactgaatcggagtccgaggtga 124




>39833_aly-MIR168b:mirbase
          Length = 176

 Score = 79.8 bits (40), Expect = 6e-16
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                              
Query: 6  agttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggctg 57
          ||||||||||||||||  ||||||||||||||||||||||||||||| ||||
Sbjct: 23 agttaccggcggtctcggattcgcttggtgcaggtcgggaactgattagctg 74



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 129 gatcccgccttgcatcaactgaatcggagaccgcggtga 167
           ||||||| |||| |||||||||||||||| ||| |||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggagtccgaggtga 148




>41348_ptc-MIR168b:mirbase
          Length = 136

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                               
Query: 16 ggtctctaattcgcttggtgcaggtcgggaactgatt 52
          |||||||||||||||||||||||||||||||||||||
Sbjct: 1  ggtctctaattcgcttggtgcaggtcgggaactgatt 37



 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 123 gaattggatcccgccttgcatcaactgaatcggaga 158
           ||||||||||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactgaatcggaga 136




>41347_ptc-MIR168a:mirbase
          Length = 160

 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 122 cgaattggatcccgccttgcatcaactgaatcggag 157
           ||||||||||||||||||||||||||||||||||||
Sbjct: 124 cgaattggatcccgccttgcatcaactgaatcggag 159



 Score = 65.9 bits (33), Expect = 9e-12
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                               
Query: 16 ggtctctaattcgcttggtgcaggtcgggaactgatt 52
          ||||||| |||||||||||||||||||||||||||||
Sbjct: 1  ggtctctgattcgcttggtgcaggtcgggaactgatt 37




>40355_rco-MIR168:mirbase
          Length = 131

 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                              
Query: 21 ctaattcgcttggtgcaggtcgggaactgattggct 56
          ||||||||||||||||||||||||||||||||||||
Sbjct: 1  ctaattcgcttggtgcaggtcgggaactgattggct 36



 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 123 gaattggatcccgccttgcatcaactgaatcg 154
           ||||||||||||||||||||||||||||||||
Sbjct: 97  gaattggatcccgccttgcatcaactgaatcg 128




>40271_bna-MIR168:mirbase
          Length = 133

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                        
Query: 12 cggcggtctctaattcgcttggtgcaggtcgggaactgattggctg 57
          |||||| |||| | ||||||||||||||||||||||||||||||||
Sbjct: 4  cggcggcctctgactcgcttggtgcaggtcgggaactgattggctg 49




>41596_vvi-MIR168:mirbase
          Length = 132

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 16 ggtctctaattcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||||||||||||
Sbjct: 1  ggtctctaattcgcttggtgcaggtcgggaac 32



 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 129 gatcccgccttgcatcaactgaatcggagac 159
           |||||||||||||||||||||||||||||||
Sbjct: 99  gatcccgccttgcatcaactgaatcggagac 129




>40043_ath-MIR168a:mirbase
          Length = 138

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 125 attggatcccgccttgcatcaactgaatcgga 156
           ||||||||||||||||||||||||||||||||
Sbjct: 96  attggatcccgccttgcatcaactgaatcgga 127



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 24 attcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39




>39832_aly-MIR168a:mirbase
          Length = 155

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 125 attggatcccgccttgcatcaactgaatcgga 156
           ||||||||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactgaatcgga 133



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 24 attcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaac 45




>42742_zma-MIR168b:mirbase
          Length = 104

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 128 ggatcccgccttgcatcaactgaatcggag 157
           ||||||||||||||||||| ||||||||||
Sbjct: 63  ggatcccgccttgcatcaagtgaatcggag 92




>42741_zma-MIR168a:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 128 ggatcccgccttgcatcaactgaatcggag 157
           ||||||||||||||| ||| ||||||||||
Sbjct: 63  ggatcccgccttgcaccaagtgaatcggag 92




>42470_ssp-MIR168a:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 128 ggatcccgccttgcatcaactgaatcggag 157
           ||||||||||||||| ||| ||||||||||
Sbjct: 60  ggatcccgccttgcaccaagtgaatcggag 89




>42460_sof-MIR168b:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 128 ggatcccgccttgcatcaactgaatcggag 157
           ||||||||||||||| ||| ||||||||||
Sbjct: 62  ggatcccgccttgcaccaagtgaatcggag 91




>42459_sof-MIR168a:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 128 ggatcccgccttgcatcaactgaatcggag 157
           ||||||||||||||| ||| ||||||||||
Sbjct: 63  ggatcccgccttgcaccaagtgaatcggag 92




>41962_osa-MIR168a:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 128 ggatcccgccttgcatcaactgaatcggag 157
           ||||||||||||||| ||| ||||||||||
Sbjct: 55  ggatcccgccttgcaccaagtgaatcggag 84




>41961_osa-MIR168a:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 128 ggatcccgccttgcatcaactgaatcggag 157
           ||||||||||||||| ||| ||||||||||
Sbjct: 55  ggatcccgccttgcaccaagtgaatcggag 84




>41888_hvu-MIR168:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 128 ggatcccgccttgcatcaactgaatcggag 157
           ||||||||||||||| ||| ||||||||||
Sbjct: 66  ggatcccgccttgcaccaagtgaatcggag 95




>41887_hvu-MIR168:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 128 ggatcccgccttgcatcaactgaatcggag 157
           ||||||||||||||| ||| ||||||||||
Sbjct: 66  ggatcccgccttgcaccaagtgaatcggag 95




>41753_bdi-MIR168:mirbase
          Length = 136

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 128 ggatcccgccttgcatcaactgaatcggag 157
           ||||||||||||||| ||| ||||||||||
Sbjct: 75  ggatcccgccttgcaccaagtgaatcggag 104