miRNEST 2.0, an integrative microRNA resource :: BLAST
>41408_ptc-MIR319e:mirbase
Length = 192
Score = 105 bits (53), Expect = 2e-23
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 163 tgcatggtgtgggagcaactccttccacatactttgcccacccattggactgaagggagc 222
|||||||||||||||||||||||||| ||| |||||| | ||||||||||||||||||||
Sbjct: 120 tgcatggtgtgggagcaactccttccgcatgctttgctcgcccattggactgaagggagc 179
Query: 223 tcctggttt 231
|||||||||
Sbjct: 180 tcctggttt 188
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 3 ggggctaaggagctcctttcagtccaatacagggggcagagatgtggatagagctgccat 62
|||||| ||| |||||||| |||||||||| | |||| |||| | || ||||||||||||
Sbjct: 4 ggggctgaggtgctccttttagtccaatacggagggctgagaagcggctagagctgccat 63
Query: 63 ctcatgcatt 72
||||||||||
Sbjct: 64 ctcatgcatt 73
>41411_ptc-MIR319h:mirbase
Length = 195
Score = 97.6 bits (49), Expect = 4e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 163 tgcatggtgtgggagcaactccttccacatactttgcccacccattggactgaagggagc 222
|||||||||||||||||||||||||| ||| ||||| | ||||||||||||||||||||
Sbjct: 121 tgcatggtgtgggagcaactccttccgcatgctttgttcgcccattggactgaagggagc 180
Query: 223 tcctggttt 231
|||||||||
Sbjct: 181 tcctggttt 189
Score = 60.0 bits (30), Expect = 8e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 3 ggggctaaggagctcctttcagtccaatacagggggcagagatgtggatagagctgccat 62
|||||||| | |||||||| ||||||||| | |||| |||| | || ||||||||||||
Sbjct: 6 ggggctaaagtgctccttttagtccaataaggagggctgagaagcggctagagctgccat 65
Query: 63 ctcatgcatt 72
||||||||||
Sbjct: 66 ctcatgcatt 75
>40370_rco-MIR319d:mirbase
Length = 187
Score = 73.8 bits (37), Expect = 5e-14
Identities = 58/64 (90%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 163 tgcatggtgtgggagcaactccttccacatactttgcccacccattggactgaagggagc 222
|||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||
Sbjct: 120 tgcatggtgtgggagcaactccttccc--tccttcccccacccattggactgaagggagc 177
Query: 223 tcct 226
||||
Sbjct: 178 tcct 181
Score = 50.1 bits (25), Expect = 8e-07
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 9 aaggagctcctttcagtccaatacagggggcagagatgtgg-atagagctgccatctcat 67
||||||||||||||||||||||| | |||| ||| | || | ||||||||||||||||
Sbjct: 4 aaggagctcctttcagtccaatatggagggcttagaagcggcaaagagctgccatctcat 63
Query: 68 gcatt 72
|||||
Sbjct: 64 gcatt 68
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 69.9 bits (35), Expect = 8e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 151 agtttagcccgatgcatggtgtgggagcaactccttccacatactttgcccacccattgg 210
||||||||| |||||||| |||||||||||||| || || |||||||||| ||||||
Sbjct: 137 agtttagcctgatgcatgacatgggagcaactcct-ccgcacgctttgcccactcattgg 195
Query: 211 actgaagggagctcc 225
|||||||||||||||
Sbjct: 196 actgaagggagctcc 210
Score = 50.1 bits (25), Expect = 8e-07
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 12 gagctcctttcagtccaatacagggggcagagatgtggatagagctgccatctcatgcat 71
|||||||||| ||||||||| || |||| ||| | || |||||||||||||||||||
Sbjct: 12 gagctccttttagtccaataaagagggctgaggggcggccagagctgccatctcatgcac 71
Query: 72 tgggttatgctta 84
| || ||||||||
Sbjct: 72 ttggctatgctta 84
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 205 cattggactgaagggagctcc 225
|||||||||||||||||||||
Sbjct: 155 cattggactgaagggagctcc 175
>40466_gma-MIR319c:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 9 aaggagctcctttcagtccaa 29
|||||||||||||||||||||
Sbjct: 203 aaggagctcctttcagtccaa 183
>41637_vvi-MIR319e:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 207 ttggactgaagggagctcct 226
||||||||||||||||||||
Sbjct: 77 ttggactgaagggagctcct 96
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 207 ttggactgaagggagctcct 226
||||||||||||||||||||
Sbjct: 176 ttggactgaagggagctcct 195
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 207 ttggactgaagggagctcct 226
||||||||||||||||||||
Sbjct: 174 ttggactgaagggagctcct 193
>41236_csi-MIR319:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 207 ttggactgaagggagctcct 226
||||||||||||||||||||
Sbjct: 91 ttggactgaagggagctcct 110
>41129_tcc-MIR319:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 207 ttggactgaagggagctcct 226
||||||||||||||||||||
Sbjct: 94 ttggactgaagggagctcct 113
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 207 ttggactgaagggagctcct 226
||||||||||||||||||||
Sbjct: 410 ttggactgaagggagctcct 429
>40071_ath-MIR319c:mirbase
Length = 199
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 207 ttggactgaagggagctcct 226
||||||||||||||||||||
Sbjct: 170 ttggactgaagggagctcct 189
>40069_ath-MIR319a:mirbase
Length = 176
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 206 attggactgaagggagctcc 225
||||||||||||||||||||
Sbjct: 153 attggactgaagggagctcc 172
>39861_aly-MIR319d:mirbase
Length = 267
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 207 ttggactgaagggagctcct 226
||||||||||||||||||||
Sbjct: 204 ttggactgaagggagctcct 223
>39860_aly-MIR319c:mirbase
Length = 271
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 207 ttggactgaagggagctcct 226
||||||||||||||||||||
Sbjct: 204 ttggactgaagggagctcct 223
>39858_aly-MIR319a:mirbase
Length = 221
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 206 attggactgaagggagctcc 225
||||||||||||||||||||
Sbjct: 176 attggactgaagggagctcc 195
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 207 ttggactgaagggagctcct 226
||||||||||||||||||||
Sbjct: 141 ttggactgaagggagctcct 160
