miRNEST 2.0, an integrative microRNA resource :: BLAST
>28363_hsa-mir-16-2:mirbase
Length = 81
Score = 145 bits (73), Expect = 5e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 gttccactctagcagcacgtaaatattggcgtagtgaaatatgtattaaacaccaatatt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 gttccactctagcagcacgtaaatattggcgtagtgaaatatatattaaacaccaatatt 60
Query: 61 actgtgctgcttcagtgtgac 81
|||||||||||| ||||||||
Sbjct: 61 actgtgctgctttagtgtgac 81
>30149_ptr-mir-16-2:mirbase
Length = 80
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 2 ttccactctagcagcacgtaaatattggcgtagtgaaatatgtattaaacaccaatatta 61
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 1 ttccactctagcagcacgtaaatattggcgtagtgaaatatatgttaaacaccaatatta 60
Query: 62 ctgtgctgcttcagtgtgac 81
||||||||||| ||||||||
Sbjct: 61 ctgtgctgctttagtgtgac 80
>30754_ppy-mir-16-2:mirbase
Length = 82
Score = 131 bits (66), Expect = 8e-32
Identities = 79/82 (96%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 gttccactctagcagcacgtaaatattgg-cgtagtgaaatatgtattaaacaccaatat 59
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 1 gttccactctagcagcacgtaaatattgggcgtagtgaaatatatattaaacaccaatat 60
Query: 60 tactgtgctgcttcagtgtgac 81
||||||||||||| ||||||||
Sbjct: 61 tactgtgctgctttagtgtgac 82
>31778_mmu-mir-16-2:mirbase
Length = 95
Score = 129 bits (65), Expect = 3e-31
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1 gttccactctagcagcacgtaaatattggcgtagtgaaatatgtattaaacaccaatatt 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 8 gttccactctagcagcacgtaaatattggcgtagtgaaataaatattaaacaccaatatt 67
Query: 61 actgtgctgcttcagtgtgac 81
| |||||||||| ||||||||
Sbjct: 68 attgtgctgctttagtgtgac 88
>32659_rno-mir-16:mirbase
Length = 95
Score = 121 bits (61), Expect = 8e-29
Identities = 76/81 (93%)
Strand = Plus / Plus
Query: 1 gttccactctagcagcacgtaaatattggcgtagtgaaatatgtattaaacaccaatatt 60
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 8 gttccgctctagcagcacgtaaatattggcgtagtgaaataaatattaaacaccaatatt 67
Query: 61 actgtgctgcttcagtgtgac 81
| |||||||||| ||||||||
Sbjct: 68 attgtgctgctttagtgtgac 88
>26947_eca-mir-16:mirbase
Length = 81
Score = 111 bits (56), Expect = 8e-26
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 1 gttccactctagcagcacgtaaatattggcgtagtgaaatatgtattaaacaccaatatt 60
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 gttccgctctagcagcacgtaaatattggcgtagtgaaataaatattaaacaccaatatt 60
Query: 61 actgtgctgctt 72
| ||||||||||
Sbjct: 61 attgtgctgctt 72
>33913_ssc-mir-16-1:mirbase
Length = 77
Score = 99.6 bits (50), Expect = 3e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 7 ctctagcagcacgtaaatattggcgtagtgaaatatgtattaaacaccaatattactgtg 66
||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||
Sbjct: 5 ctctagcagcacgtaaatattggcgtagtaaaataaatattaaacaccaatattattgtg 64
Query: 67 ctgctt 72
||||||
Sbjct: 65 ctgctt 70
>33131_bta-mir-16b:mirbase
Length = 93
Score = 97.6 bits (49), Expect = 1e-21
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 1 gttccactctagcagcacgtaaatattggcgtagtgaaatatgtattaaacaccaatatt 60
||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 8 gttccgctgtagcagcacgtaaatattggcgtagtaaaataaatattaaacaccaatatt 67
Query: 61 actgtgctgcttcagtgtgac 81
| |||||||||| || |||||
Sbjct: 68 attgtgctgctttagcgtgac 88
>26626_cfa-mir-16-2:mirbase
Length = 65
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgtagtgaaatatgtattaaacaccaatattactgtgctg 69
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 1 tagcagcacgtaaatattggcgtagtgaaataaaaattaaacaccaatattattgtgctg 60
Query: 70 ctt 72
|||
Sbjct: 61 ctt 63
>31429_oan-mir-16b:mirbase
Length = 101
Score = 65.9 bits (33), Expect = 4e-12
Identities = 58/66 (87%), Gaps = 4/66 (6%)
Strand = Plus / Plus
Query: 7 ctctagcagcacgtaaatattggcgtagtgaaatatgtattaaacaccaatattactgtg 66
||||||||||||||||||||||| |||||||| || |||||| ||||||||| ||||
Sbjct: 18 ctctagcagcacgtaaatattggtgtagtgaa----gtcttaaaccccaatattattgtg 73
Query: 67 ctgctt 72
||||||
Sbjct: 74 ctgctt 79
>25895_gga-mir-16-2:mirbase
Length = 94
Score = 63.9 bits (32), Expect = 2e-11
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 9 ctagcagcacgtaaatattggcgtagtgaaatatgtattaaacaccaatattactgtgct 68
||||||||||||||||||||| ||||| ||||| |||||| ||||||||| ||||||
Sbjct: 16 ctagcagcacgtaaatattggtgtagtaaaataaaccttaaaccccaatattattgtgct 75
Query: 69 gctt 72
||||
Sbjct: 76 gctt 79
>25894_gga-mir-16-1:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 actctagcagcacgtaaatattgg 29
||||||||||||||||||||||||
Sbjct: 10 actctagcagcacgtaaatattgg 33
>26625_cfa-mir-16-1:mirbase
Length = 65
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattggcgt 23
>26948_eca-mir-16-2:mirbase
Length = 63
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattggcgt 23
>27334_mdo-mir-16:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>27480_age-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>27589_sla-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>27652_mml-mir-16-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>28172_mne-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>28260_ggo-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>28362_hsa-mir-16-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>30044_ppa-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>30148_ptr-mir-16-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>30753_ppy-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcgt 36
>31428_oan-mir-16a:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 29 tagcagcacgtaaatattggcgt 51
>31777_mmu-mir-16-1:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 16 tagcagcacgtaaatattggcgt 38
>33914_ssc-mir-16-2:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcgt 32
|||||||||||||||||||||||
Sbjct: 9 tagcagcacgtaaatattggcgt 31
>27541_lla-mir-16:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattggcg 31
||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggcg 35
>26400_tgu-mir-16b:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 ctagcagcacgtaaatattgg 29
|||||||||||||||||||||
Sbjct: 10 ctagcagcacgtaaatattgg 30
>25429_pma-mir-16:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattgg 29
||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattgg 29
>25700_xtr-mir-16a:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattgg 29
||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattgg 33
>25701_xtr-mir-16b:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattgg 29
||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattgg 33
>26399_tgu-mir-16a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattgg 29
||||||||||||||||||||
Sbjct: 11 tagcagcacgtaaatattgg 30
>31394_lca-mir-16:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattgg 29
||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattgg 33
>33130_bta-mir-16a:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattgg 29
||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattgg 33
>34206_dre-mir-16a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattgg 29
||||||||||||||||||||
Sbjct: 13 tagcagcacgtaaatattgg 32
>34207_dre-mir-16b:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattgg 29
||||||||||||||||||||
Sbjct: 39 tagcagcacgtaaatattgg 58
>34547_fru-mir-16:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattgg 29
||||||||||||||||||||
Sbjct: 13 tagcagcacgtaaatattgg 32
>34695_tni-mir-16:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tagcagcacgtaaatattgg 29
||||||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattgg 20
>25896_gga-mir-16c:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 7 ctctagcagcacgtaaata 25
|||||||||||||||||||
Sbjct: 2 ctctagcagcacgtaaata 20
>26401_tgu-mir-16c:mirbase
Length = 72
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 7 ctctagcagcacgtaaata 25
|||||||||||||||||||
Sbjct: 8 ctctagcagcacgtaaata 26
