miRNEST 2.0, an integrative microRNA resource :: BLAST
>28366_hsa-mir-18b:mirbase
Length = 71
Score = 141 bits (71), Expect = 7e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
Query: 61 cccttctggca 71
|||||||||||
Sbjct: 61 cccttctggca 71
>30758_ppy-mir-18b:mirbase
Length = 71
Score = 141 bits (71), Expect = 7e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
Query: 61 cccttctggca 71
|||||||||||
Sbjct: 61 cccttctggca 71
>33918_ssc-mir-18b:mirbase
Length = 83
Score = 141 bits (71), Expect = 7e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 65
Query: 61 cccttctggca 71
|||||||||||
Sbjct: 66 cccttctggca 76
>30153_ptr-mir-18b:mirbase
Length = 70
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
Query: 61 cccttctggc 70
||| ||||||
Sbjct: 61 cccatctggc 70
>31432_oan-mir-18:mirbase
Length = 130
Score = 125 bits (63), Expect = 4e-30
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 24 tgtgttaaggtgcatctagtgcagttagtgaagtagcttagaatctactgccctaaatgc 83
Query: 61 cccttctggca 71
||||||||||
Sbjct: 84 tccttctggca 94
>33135_bta-mir-18b:mirbase
Length = 75
Score = 125 bits (63), Expect = 4e-30
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3 tgtgttaaggtgcatctagtgcagttagtgaagcagctcagaatctactgccctaaatgc 62
Query: 61 cccttctggca 71
||||||||||
Sbjct: 63 tccttctggca 73
>26629_cfa-mir-18b:mirbase
Length = 77
Score = 117 bits (59), Expect = 1e-27
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 3 tgtgttaaggtgcatctagtgcagttagtgaagccgcttagaacctactgccctaaatgc 62
Query: 61 cccttctggca 71
|||||| ||||
Sbjct: 63 cccttccggca 73
>26951_eca-mir-18b:mirbase
Length = 59
Score = 117 bits (59), Expect = 1e-27
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccct 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccct 59
>31781_mmu-mir-18b:mirbase
Length = 83
Score = 117 bits (59), Expect = 1e-27
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 6 tgtgttaaggtgcatctagtgctgttagtgaagcagcttacaatctactgccctaaatgc 65
Query: 61 cccttct 67
|||||||
Sbjct: 66 cccttct 72
>25900_gga-mir-18b:mirbase
Length = 84
Score = 109 bits (55), Expect = 3e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||
Sbjct: 10 tgtgttaaggtgcatctagtgcagttagtgacgtagcgtagaatctactgccctaaatgc 69
Query: 61 cccttctggca 71
||||||||||
Sbjct: 70 tccttctggca 80
>25656_xla-mir-18:mirbase
Length = 79
Score = 85.7 bits (43), Expect = 4e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||
Sbjct: 4 tgtgttaaggtgcatctagtgcagttagtgacatagcgtagcatctactgccctaaatgc 63
Query: 61 cccttctggca 71
|||| |||||
Sbjct: 64 tccttttggca 74
>25705_xtr-mir-18a:mirbase
Length = 87
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 14 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 73
Query: 66 ctggca 71
||||||
Sbjct: 74 ctggca 79
>25899_gga-mir-18a:mirbase
Length = 93
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 14 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 73
Query: 66 ctggca 71
||||||
Sbjct: 74 ctggca 79
>26628_cfa-mir-18a:mirbase
Length = 92
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 14 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 73
Query: 66 ctggca 71
||||||
Sbjct: 74 ctggca 79
>27337_mdo-mir-18:mirbase
Length = 72
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 7 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 66
Query: 66 ctggca 71
||||||
Sbjct: 67 ctggca 72
>27483_age-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggca 71
||||||
Sbjct: 66 ctggca 71
>27544_lla-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggca 71
||||||
Sbjct: 66 ctggca 71
>27592_sla-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggca 71
||||||
Sbjct: 66 ctggca 71
>27656_mml-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggca 71
||||||
Sbjct: 66 ctggca 71
>28175_mne-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggca 71
||||||
Sbjct: 66 ctggca 71
>28263_ggo-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggca 71
||||||
Sbjct: 66 ctggca 71
>28365_hsa-mir-18a:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggca 71
||||||
Sbjct: 66 ctggca 71
>30047_ppa-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggca 71
||||||
Sbjct: 66 ctggca 71
>30152_ptr-mir-18a:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggca 71
||||||
Sbjct: 66 ctggca 71
>30757_ppy-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggca 71
||||||
Sbjct: 66 ctggca 71
>31397_lca-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggca 71
||||||
Sbjct: 66 ctggca 71
>33134_bta-mir-18a:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggca 71
||||||
Sbjct: 66 ctggca 71
>33917_ssc-mir-18a:mirbase
Length = 92
Score = 83.8 bits (42), Expect = 1e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 14 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 73
Query: 66 ctggca 71
||||||
Sbjct: 74 ctggca 79
>25706_xtr-mir-18b:mirbase
Length = 78
Score = 77.8 bits (39), Expect = 9e-16
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||
Sbjct: 4 tgtgttaaggtgcatctagtgcagttagtgacatagtgtagcatctactgccctaaatgc 63
Query: 61 cccttctggca 71
|||| |||||
Sbjct: 64 tccttttggca 74
>26404_tgu-mir-18a:mirbase
Length = 72
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 11 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 70
Query: 66 ct 67
||
Sbjct: 71 ct 72
>31780_mmu-mir-18a:mirbase
Length = 96
Score = 75.8 bits (38), Expect = 4e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || ||| |||||||||||||| ||| ||||
Sbjct: 17 taaggtgcatctagtgcagatagtgaagtagactagcatctactgccctaagtgctcctt 76
Query: 66 ctggca 71
||||||
Sbjct: 77 ctggca 82
>32664_rno-mir-18a:mirbase
Length = 96
Score = 75.8 bits (38), Expect = 4e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || ||| |||||||||||||| ||| ||||
Sbjct: 17 taaggtgcatctagtgcagatagtgaagtagactagcatctactgccctaagtgctcctt 76
Query: 66 ctggca 71
||||||
Sbjct: 77 ctggca 82
>26950_eca-mir-18a:mirbase
Length = 61
Score = 73.8 bits (37), Expect = 1e-14
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 1 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 60
Query: 66 c 66
|
Sbjct: 61 c 61
>34211_dre-mir-18a:mirbase
Length = 83
Score = 69.9 bits (35), Expect = 2e-13
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
|||| ||||||||||||||||||| |||||||| || ||| | |||||||||||| |||
Sbjct: 6 tgtgctaaggtgcatctagtgcagatagtgaagtagactagcacctactgccctaagtgc 65
Query: 61 cccttctggca 71
||||||||||
Sbjct: 66 tccttctggca 76
>26405_tgu-mir-18b:mirbase
Length = 132
Score = 61.9 bits (31), Expect = 5e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtga 31
|||||||||||||||||||||||||||||||
Sbjct: 96 tgtgttaaggtgcatctagtgcagttagtga 126
>34550_fru-mir-18:mirbase
Length = 76
Score = 61.9 bits (31), Expect = 5e-11
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
|||| ||||||||||||||||||| ||||||| || ||| | |||||||||||| |||
Sbjct: 2 tgtgctaaggtgcatctagtgcagatagtgaaatagactagcacctactgccctaagtgc 61
Query: 61 cccttctggca 71
||||||||||
Sbjct: 62 tccttctggca 72
>34698_tni-mir-18:mirbase
Length = 76
Score = 61.9 bits (31), Expect = 5e-11
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
|||| ||||||||||||||||||| ||||||| || ||| | |||||||||||| |||
Sbjct: 2 tgtgctaaggtgcatctagtgcagatagtgaaatagactagcacctactgccctaagtgc 61
Query: 61 cccttctggca 71
||||||||||
Sbjct: 62 tccttctggca 72
>34212_dre-mir-18b:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 2e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 65
|||||||||| |||||||| ||||||| || ||| | |||||||||||| ||||||||
Sbjct: 13 taaggtgcatttagtgcagatagtgaaatagactagcacctactgccctaagtgcccctt 72
Query: 66 ctggca 71
||||||
Sbjct: 73 ctggca 78
>34213_dre-mir-18c:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgc 51
|||||||||||| ||| ||||||||||| || ||| |||||||||
Sbjct: 11 taaggtgcatcttgtgtagttagtgaagtagtctagtatctactgc 56
>25433_pma-mir-18a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagt 29
|||| ||||||||||||||||||| ||||
Sbjct: 13 tgtgctaaggtgcatctagtgcagatagt 41
