miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>28400_hsa-mir-33b:mirbase
          Length = 96

 Score =  186 bits (94), Expect = 2e-48
 Identities = 94/94 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  gcgggcggccccgcggtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gcgggcggccccgcggtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcc 60

                                            
Query: 61 tcggcagtgcagcccggagccggcccctggcacc 94
          ||||||||||||||||||||||||||||||||||
Sbjct: 61 tcggcagtgcagcccggagccggcccctggcacc 94




>30186_ptr-mir-33b:mirbase
          Length = 95

 Score =  184 bits (93), Expect = 8e-48
 Identities = 93/93 (100%)
 Strand = Plus / Plus

                                                                      
Query: 2  cgggcggccccgcggtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcct 61
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cgggcggccccgcggtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcct 60

                                           
Query: 62 cggcagtgcagcccggagccggcccctggcacc 94
          |||||||||||||||||||||||||||||||||
Sbjct: 61 cggcagtgcagcccggagccggcccctggcacc 93




>26662_cfa-mir-33b:mirbase
          Length = 94

 Score =  170 bits (86), Expect = 1e-43
 Identities = 92/94 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  gcgggcggccccgcggtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcc 60
          |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 1  gcgggcggccccgcggtgcattgctgttgcattgcacgtgagtgacgcgggtgcagtgcc 60

                                            
Query: 61 tcggcagtgcagcccggagccggcccctggcacc 94
          ||||||||||||||||||||||||||||||||||
Sbjct: 61 tcggcagtgcagcccggagccggcccctggcacc 94




>33174_bta-mir-33b:mirbase
          Length = 94

 Score =  161 bits (81), Expect = 1e-40
 Identities = 93/96 (96%), Gaps = 2/96 (2%)
 Strand = Plus / Plus

                                                                      
Query: 1  gcgggcggccccgcggtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcc 60
          ||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||
Sbjct: 1  gcgggcggccccgcggtgcattgctgttgcattgca--tgtgtgaggcaggtgcagtgcc 58

                                              
Query: 61 tcggcagtgcagcccggagccggcccctggcaccgc 96
          ||||||||||||||||||||||||||||||||||||
Sbjct: 59 tcggcagtgcagcccggagccggcccctggcaccgc 94




>26983_eca-mir-33b:mirbase
          Length = 56

 Score =  111 bits (56), Expect = 9e-26
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                  
Query: 16 gtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcctcggcagtgca 71
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcctcggcagtgca 56




>30790_ppy-mir-33b:mirbase
          Length = 90

 Score = 89.7 bits (45), Expect = 3e-19
 Identities = 45/45 (100%)
 Strand = Plus / Plus

                                                       
Query: 50 ggtgcagtgcctcggcagtgcagcccggagccggcccctggcacc 94
          |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 ggtgcagtgcctcggcagtgcagcccggagccggcccctggcacc 90