miRNEST 2.0, an integrative microRNA resource :: BLAST
>28426_hsa-mir-122:mirbase
Length = 85
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 ccttagcagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccttagcagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccatta 60
Query: 61 tcacactaaatagctactactaggc 85
|||||||||||||||||| ||||||
Sbjct: 61 tcacactaaatagctactgctaggc 85
>30814_ppy-mir-122:mirbase
Length = 85
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 ccttagcagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccttagcagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccatta 60
Query: 61 tcacactaaatagctactactaggc 85
|||||||||||||||||| ||||||
Sbjct: 61 tcacactaaatagctactgctaggc 85
>30207_ptr-mir-122:mirbase
Length = 84
Score = 151 bits (76), Expect = 9e-38
Identities = 82/84 (97%)
Strand = Plus / Plus
Query: 2 cttagcagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattat 61
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 cttagcagagctgtggagtgtgacaatggtgtttgtgtctaaattatcaaacgccattat 60
Query: 62 cacactaaatagctactactaggc 85
||||||||||||||||| ||||||
Sbjct: 61 cacactaaatagctactgctaggc 84
>33197_bta-mir-122:mirbase
Length = 85
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 1 ccttagcagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccatta 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccttagcagagctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccatta 60
Query: 61 tcacactaaatagctact 78
||||||||||||||||||
Sbjct: 61 tcacactaaatagctact 78
>33967_ssc-mir-122:mirbase
Length = 85
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 1 ccttagcagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccatta 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccttagcagagctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccatta 60
Query: 61 tcacactaaatagctact 78
||||||||||||||||||
Sbjct: 61 tcacactaaatagctact 78
>29379_hsa-mir-3591:mirbase
Length = 73
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 7 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 14
Query: 67 taaatagctact 78
||||||||||||
Sbjct: 13 taaatagctact 2
>29380_hsa-mir-3591:mirbase
Length = 73
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 7 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 14
Query: 67 taaatagctact 78
||||||||||||
Sbjct: 13 taaatagctact 2
>25937_gga-mir-122-1:mirbase
Length = 77
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 7 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 66
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 1 cagagctgtggagtgtgacaatggtgtttgtgtccaatctatcaaacgccattatcacac 60
Query: 67 taaatagctact 78
||||||||||||
Sbjct: 61 taaatagctact 72
>27006_eca-mir-122:mirbase
Length = 66
Score = 123 bits (62), Expect = 2e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 10 agctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacactaa 69
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
Query: 70 atagct 75
||||||
Sbjct: 61 atagct 66
>25938_gga-mir-122-2:mirbase
Length = 77
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 7 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 66
||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 1 cagagctatggagtgtgacaatggtgtttgtgtccaatctatcaaacgccattatcacac 60
Query: 67 taaatagctact 78
||||||||||||
Sbjct: 61 taaatagctact 72
>31478_oan-mir-122:mirbase
Length = 111
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 7 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 66
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 21 cagagctgtggagtgtgacaatggtgtttgtgtccagtctatcaaacgccattatcacac 80
Query: 67 taaatagctact 78
||||||||||||
Sbjct: 81 taaatagctact 92
>31837_mmu-mir-122:mirbase
Length = 66
Score = 115 bits (58), Expect = 5e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 10 agctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacactaa 69
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 1 agctgtggagtgtgacaatggtgtttgtgtccaaaccatcaaacgccattatcacactaa 60
Query: 70 atagct 75
||||||
Sbjct: 61 atagct 66
>32716_rno-mir-122:mirbase
Length = 85
Score = 113 bits (57), Expect = 2e-26
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 1 ccttagcagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccatta 60
||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| |
Sbjct: 1 ccttagcagagctctggagtgtgacaatggtgtttgtgtccaaaacatcaaacgccatca 60
Query: 61 tcacactaaatagctactactaggc 85
|||||||||| ||||||| ||||||
Sbjct: 61 tcacactaaacagctactgctaggc 85
>33091_rno-mir-3591:mirbase
Length = 109
Score = 113 bits (57), Expect = 2e-26
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 1 ccttagcagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccatta 60
||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| |
Sbjct: 96 ccttagcagagctctggagtgtgacaatggtgtttgtgtccaaaacatcaaacgccatca 37
Query: 61 tcacactaaatagctactactaggc 85
|||||||||| ||||||| ||||||
Sbjct: 36 tcacactaaacagctactgctaggc 12
>27371_mdo-mir-122:mirbase
Length = 74
Score = 111 bits (56), Expect = 8e-26
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 7 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 66
||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 1 cagagctatggagtgtgacaatggtgtttgtgtccagtctatcaaacgccattatcacac 60
Query: 67 taaatagctact 78
||||||||||||
Sbjct: 61 taaatagctact 72
>26685_cfa-mir-122:mirbase
Length = 58
Score = 107 bits (54), Expect = 1e-24
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 15 tggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacactaaata 72
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 tggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaaata 58
>26449_tgu-mir-122:mirbase
Length = 72
Score = 101 bits (51), Expect = 8e-23
Identities = 64/67 (95%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 7 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 66
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 3 cagagctgtggagtgtgacaatggtgtttgtgtc-catctatcaaacgccattatcacac 61
Query: 67 taaatag 73
|||||||
Sbjct: 62 taaatag 68
>34731_tni-mir-122:mirbase
Length = 66
Score = 91.7 bits (46), Expect = 7e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 10 agctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacactaa 69
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 1 agctgtggagtgtgacaatggtgtttgtgtcctttctttcaaacgccattatcacactaa 60
Query: 70 atagct 75
||||||
Sbjct: 61 atagct 66
>25762_xtr-mir-122:mirbase
Length = 69
Score = 89.7 bits (45), Expect = 3e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 9 gagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacacta 68
||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 1 gagctatggagtgtgacaatggtgtttgtgtcagagctatcaaacgccattatcacacta 60
Query: 69 a 69
|
Sbjct: 61 a 61
>34584_fru-mir-122:mirbase
Length = 66
Score = 75.8 bits (38), Expect = 4e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 10 agctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacactaa 69
|||| ||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 1 agctatggagtgtgacaatggtgtttgtttcctttctttcaaacgccattatcacactaa 60
Query: 70 atagct 75
||||||
Sbjct: 61 atagct 66
>34270_dre-mir-122:mirbase
Length = 76
Score = 67.9 bits (34), Expect = 1e-12
Identities = 63/71 (88%), Gaps = 5/71 (7%)
Strand = Plus / Plus
Query: 7 cagagctgtggagtgtgacaatggtgtttgtgtctaaact---atcaaacgccattatca 63
||||||||||||||||||||||||||||||| || | || ||||||||||||||||
Sbjct: 3 cagagctgtggagtgtgacaatggtgtttgtatc--atctgtcgtcaaacgccattatca 60
Query: 64 cactaaatagc 74
|||||||||||
Sbjct: 61 cactaaatagc 71
