miRNEST 2.0, an integrative microRNA resource :: BLAST
>30828_ppy-mir-130b:mirbase
Length = 82
Score = 147 bits (74), Expect = 1e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 ggcctgcccgacactctttccctgttgcactactgtgggccactgggaagcagtgcaatg 60
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 1 ggcctgcccgacactctttccctgttgcactactatgggccgctgggaagcagtgcaatg 60
Query: 61 atgaaagggcatcggtcaggtc 82
||||||||||||||||||||||
Sbjct: 61 atgaaagggcatcggtcaggtc 82
>30219_ptr-mir-130b:mirbase
Length = 81
Score = 145 bits (73), Expect = 5e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 2 gcctgcccgacactctttccctgttgcactactgtgggccactgggaagcagtgcaatga 61
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 1 gcctgcccgacactctttccctgttgcactactatgggccgctgggaagcagtgcaatga 60
Query: 62 tgaaagggcatcggtcaggtc 82
|||||||||||||||||||||
Sbjct: 61 tgaaagggcatcggtcaggtc 81
>33980_ssc-mir-130b:mirbase
Length = 80
Score = 141 bits (71), Expect = 9e-35
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 2 gcctgcccgacactctttccctgttgcactactgtgggccactgggaagcagtgcaatga 61
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcctgcctgacactctttccctgttgcactactgtgggccactgggaagcagtgcaatga 60
Query: 62 tgaaagggcatcggtcagg 80
|||||||||||| ||||||
Sbjct: 61 tgaaagggcatcagtcagg 79
>28443_hsa-mir-130b:mirbase
Length = 82
Score = 139 bits (70), Expect = 3e-34
Identities = 79/82 (96%)
Strand = Plus / Plus
Query: 1 ggcctgcccgacactctttccctgttgcactactgtgggccactgggaagcagtgcaatg 60
|||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||
Sbjct: 1 ggcctgcccgacactctttccctgttgcactactataggccgctgggaagcagtgcaatg 60
Query: 61 atgaaagggcatcggtcaggtc 82
||||||||||||||||||||||
Sbjct: 61 atgaaagggcatcggtcaggtc 82
>33212_bta-mir-130b:mirbase
Length = 82
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 1 ggcctgcccgacactctttccctgttgcactactgtgggccactgggaagcagtgcaatg 60
|||||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||
Sbjct: 1 ggcctgcctgacactctttccctgttgcactactgtgcgcccctggcaagcagtgcaatg 60
Query: 61 atgaaagggcatcggtcagg 80
||||||||||||||||||||
Sbjct: 61 atgaaagggcatcggtcagg 80
>32732_rno-mir-130b:mirbase
Length = 82
Score = 125 bits (63), Expect = 5e-30
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 10 gacactctttccctgttgcactactgtgggccactgggaagcagtgcaatgatgaaaggg 69
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 10 gacactctttccctgttgcactactgtgggcctctgggaagcagtgcaatgatgaaaggg 69
Query: 70 catcggtcagg 80
|||| ||||||
Sbjct: 70 catccgtcagg 80
>27023_eca-mir-130b:mirbase
Length = 81
Score = 119 bits (60), Expect = 3e-28
Identities = 76/80 (95%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 ggcctgcccgacactctttccctgttgcactactgtgggccactgggaagcagtgcaatg 60
|||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 1 ggcctgcctgacactctttccctgttgcactactgtgggctgct-ggaagcagtgcaatg 59
Query: 61 atgaaagggcatcggtcagg 80
||||||||||||||||||||
Sbjct: 60 atgaaagggcatcggtcagg 79
>31857_mmu-mir-130b:mirbase
Length = 82
Score = 119 bits (60), Expect = 3e-28
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 10 gacactctttccctgttgcactactgtgggccactgggaagcagtgcaatgatgaaaggg 69
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 10 gacactctttccctgttgcactactgtgggcctctgggaagcagtgcaatgatgaaaggg 69
Query: 70 catc 73
||||
Sbjct: 70 catc 73
>26699_cfa-mir-130b:mirbase
Length = 60
Score = 111 bits (56), Expect = 8e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 13 actctttccctgttgcactactgtgggccactgggaagcagtgcaatgatgaaagggcat 72
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 actctttccctgttgcactactgtgggccgctgggaagcagtgcaatgatgaaagggcat 60
>25773_xtr-mir-130b:mirbase
Length = 76
Score = 63.9 bits (32), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 4/66 (6%)
Strand = Plus / Plus
Query: 10 gacactctttccctgttgcactactgtgggccactg--ggaagcagtgcaatgatgaaag 67
||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 7 gacactctttccctgttgcactactgtgg--cagtgaataaagcagtgcaatgatgaaag 64
Query: 68 ggcatc 73
||||||
Sbjct: 65 ggcatc 70
>34291_dre-mir-130b:mirbase
Length = 84
Score = 63.9 bits (32), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 5 tgcccgacactctttccctgttgcactactgtgg--gccactgggaagcagtgcaatgat 62
|||| ||||||||||||||||||||||||||||| || | | |||||||||||| ||
Sbjct: 5 tgcctgacactctttccctgttgcactactgtgggagctgcagcaaagcagtgcaataat 64
Query: 63 gaaagggcatc 73
|||||||||||
Sbjct: 65 gaaagggcatc 75
>25948_gga-mir-130b:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 ctctttccctgttgcactactgt 36
|||||||||||||||||||||||
Sbjct: 14 ctctttccctgttgcactactgt 36
>26460_tgu-mir-130b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 ctctttccctgttgcactactgt 36
|||||||||||||||||||||||
Sbjct: 63 ctctttccctgttgcactactgt 85
>31487_oan-mir-130c:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 49 agcagtgcaatgatgaaagggcatcgg 75
|||||||||||| | ||||||||||||
Sbjct: 51 agcagtgcaatggtaaaagggcatcgg 77
>32731_rno-mir-130a:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 49 agcagtgcaatgatgaaagggcatcgg 75
|||||||||||| | ||||||||||||
Sbjct: 53 agcagtgcaatgttaaaagggcatcgg 79
>33089_rno-mir-3590:mirbase
Length = 74
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 49 agcagtgcaatgatgaaagggcatcgg 75
|||||||||||| | ||||||||||||
Sbjct: 29 agcagtgcaatgttaaaagggcatcgg 3
>33090_rno-mir-3590:mirbase
Length = 74
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 49 agcagtgcaatgatgaaagggcatcgg 75
|||||||||||| | ||||||||||||
Sbjct: 29 agcagtgcaatgttaaaagggcatcgg 3
