miRNEST 2.0, an integrative microRNA resource :: BLAST
>30238_ptr-mir-146a:mirbase
Length = 98
Score = 182 bits (92), Expect = 3e-47
Identities = 95/96 (98%)
Strand = Plus / Plus
Query: 4 atgtgtatcctcagctttgagaactgaattccatgggttgtgtcagtgtcagacctgtga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 atgtgtatcctcagctttgagaactgaattccatgggttgtgtcagtgtcagacctgtga 62
Query: 64 aattcagttcttcagctgggatatctctgtcgtcgt 99
||||||||||||||||||||||||||||||| ||||
Sbjct: 63 aattcagttcttcagctgggatatctctgtcatcgt 98
>30850_ppy-mir-146a:mirbase
Length = 99
Score = 182 bits (92), Expect = 3e-47
Identities = 95/96 (98%)
Strand = Plus / Plus
Query: 4 atgtgtatcctcagctttgagaactgaattccatgggttgtgtcagtgtcagacctgtga 63
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4 atgtgtatcctcagctttgagaactgaattccatgggttgtgtctgtgtcagacctgtga 63
Query: 64 aattcagttcttcagctgggatatctctgtcgtcgt 99
||||||||||||||||||||||||||||||||||||
Sbjct: 64 aattcagttcttcagctgggatatctctgtcgtcgt 99
>28466_hsa-mir-146a:mirbase
Length = 99
Score = 174 bits (88), Expect = 8e-45
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 4 atgtgtatcctcagctttgagaactgaattccatgggttgtgtcagtgtcagacctgtga 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 4 atgtgtatcctcagctttgagaactgaattccatgggttgtgtcagtgtcagacctctga 63
Query: 64 aattcagttcttcagctgggatatctctgtcgtcgt 99
||||||||||||||||||||||||||||||| ||||
Sbjct: 64 aattcagttcttcagctgggatatctctgtcatcgt 99
>33232_bta-mir-146a:mirbase
Length = 99
Score = 143 bits (72), Expect = 3e-35
Identities = 84/88 (95%)
Strand = Plus / Plus
Query: 4 atgtgtatcctcagctttgagaactgaattccatgggttgtgtcagtgtcagacctgtga 63
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4 atgtgtatcctcagctttgagaactgaattccataggttgtgtcagtgtcagacctgtga 63
Query: 64 aattcagttcttcagctgggatatctct 91
| || ||||||| |||||||||||||||
Sbjct: 64 agtttagttctttagctgggatatctct 91
>33996_ssc-mir-146a:mirbase
Length = 78
Score = 127 bits (64), Expect = 2e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 13 ctcagctttgagaactgaattccatgggttgtgtcagtgtcagacctgtgaaattcagtt 72
|||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||
Sbjct: 3 ctcagctttgagaactgaattccatgggttgtgtcattgtcagacctgtgaagtttagtt 62
Query: 73 cttcagctgggatatc 88
||||||||||||||||
Sbjct: 63 cttcagctgggatatc 78
>27046_eca-mir-146a:mirbase
Length = 65
Score = 113 bits (57), Expect = 2e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 16 agctttgagaactgaattccatgggttgtgtcagtgtcagacctgtgaaattcagttctt 75
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 1 agctttgagaactgaattccatgggttgtgtcagcgtcagacctgtgaagttcagttctt 60
Query: 76 cagct 80
|||||
Sbjct: 61 cagct 65
>32752_rno-mir-146a:mirbase
Length = 95
Score = 113 bits (57), Expect = 2e-26
Identities = 84/93 (90%)
Strand = Plus / Plus
Query: 5 tgtgtatcctcagctttgagaactgaattccatgggttgtgtcagtgtcagacctgtgaa 64
||||||||||||||| |||||||||||||||||||||| | || |||||||||||||||
Sbjct: 1 tgtgtatcctcagctctgagaactgaattccatgggttatagcaatgtcagacctgtgaa 60
Query: 65 attcagttcttcagctgggatatctctgtcgtc 97
|||||||||| |||||||||| |||| |||||
Sbjct: 61 gttcagttctttagctgggatagctctatcgtc 93
>27394_mdo-mir-146a:mirbase
Length = 91
Score = 111 bits (56), Expect = 1e-25
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 7 tgtatcctcagctttgagaactgaattccatgggttgtgtcagtgtcagacctgtgaaat 66
|||||| ||||||||||||||||||||||||||||||| | || |||||||| |||||
Sbjct: 1 tgtatcttcagctttgagaactgaattccatgggttgtctttgtatcagacctatgaaac 60
Query: 67 tcagttcttcagctgggatatctctgtc 94
|||||||||||||||| |||||||||||
Sbjct: 61 tcagttcttcagctggaatatctctgtc 88
>26720_cfa-mir-146a:mirbase
Length = 58
Score = 107 bits (54), Expect = 1e-24
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 21 tgagaactgaattccatgggttgtgtcagtgtcagacctgtgaaattcagttcttcag 78
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 tgagaactgaattccatgggttgtgtcagtgtcagacctgtgaagttcagttcttcag 58
>31879_mmu-mir-146a:mirbase
Length = 65
Score = 97.6 bits (49), Expect = 1e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 16 agctttgagaactgaattccatgggttgtgtcagtgtcagacctgtgaaattcagttctt 75
|||| |||||||||||||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 1 agctctgagaactgaattccatgggttatatcaatgtcagacctgtgaaattcagttctt 60
Query: 76 cagct 80
|||||
Sbjct: 61 cagct 65
>25965_gga-mir-146a:mirbase
Length = 99
Score = 77.8 bits (39), Expect = 1e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 6 gtgtatcctcagctttgagaactgaattccatgggttgt 44
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtatcctcagctttgagaactgaattccatgggttgt 39
>26477_tgu-mir-146c:mirbase
Length = 72
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 13 ctcagctttgagaactgaattccatgggttgt 44
||||||||||||||||||||||||||||||||
Sbjct: 3 ctcagctttgagaactgaattccatgggttgt 34
>31503_oan-mir-146a:mirbase
Length = 129
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 13 ctcagctttgagaactgaattccatgggttgtg 45
|||||||||||||||||||||||| ||||||||
Sbjct: 23 ctcagctttgagaactgaattccacgggttgtg 55
>25795_xtr-mir-146:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 agctttgagaactgaattccatgggttgt 44
|||||||||||||||||||||| ||||||
Sbjct: 13 agctttgagaactgaattccataggttgt 41
>25966_gga-mir-146b:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 17 gctttgagaactgaattccat 37
|||||||||||||||||||||
Sbjct: 15 gctttgagaactgaattccat 35
>25967_gga-mir-146c-1:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 15 cagctttgagaactgaattccatgg 39
||||| |||||||||||||||||||
Sbjct: 28 cagctctgagaactgaattccatgg 52
>25968_gga-mir-146c-2:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 15 cagctttgagaactgaattccatgg 39
||||| |||||||||||||||||||
Sbjct: 28 cagctctgagaactgaattccatgg 52
>26475_tgu-mir-146a:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 15 cagctttgagaactgaattccatgg 39
||||| |||||||||||||||||||
Sbjct: 23 cagctctgagaactgaattccatgg 47
>34319_dre-mir-146b-1:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 gctttgagaactgaattccatgggt 41
|||||||||||||||||||| ||||
Sbjct: 8 gctttgagaactgaattccaagggt 32
>34320_dre-mir-146b-2:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 gctttgagaactgaattccatgggt 41
|||||||||||||||||||| ||||
Sbjct: 8 gctttgagaactgaattccaagggt 32
